RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 OR5F1O95221 314 aa25.53■■□□□ 1.68
CBX4-201ENST00000269397 MT-ND5P03915 603 aa25.53■■□□□ 1.68
CBX4-201ENST00000269397 HCCSP53701 268 aa25.53■■□□□ 1.68
CBX4-201ENST00000269397 EXOSC2Q13868 293 aaKnown RBP25.53■■□□□ 1.68
CBX4-201ENST00000269397 ZIC1Q15915 447 aa25.53■■□□□ 1.68
CBX4-201ENST00000269397 TMEM35AQ53FP2 167 aa25.53■■□□□ 1.68
CBX4-201ENST00000269397 ACSM3Q53FZ2 586 aa25.53■■□□□ 1.68
CBX4-201ENST00000269397 PLPP4Q5VZY2 271 aa25.53■■□□□ 1.68
CBX4-201ENST00000269397 CD276Q5ZPR3 534 aa25.53■■□□□ 1.68
CBX4-201ENST00000269397 OR4N5Q8IXE1 308 aa25.53■■□□□ 1.68
CBX4-201ENST00000269397 OR7G2Q8NG99 324 aa25.53■■□□□ 1.68
CBX4-201ENST00000269397 OR52L1Q8NGH7 329 aa25.53■■□□□ 1.68
CBX4-201ENST00000269397 OR5J2Q8NH18 312 aa25.53■■□□□ 1.68
CBX4-201ENST00000269397 PLEKHM1Q9Y4G2 1056 aa25.53■■□□□ 1.68
CBX4-201ENST00000269397 GPR171O14626 319 aa25.53■■□□□ 1.68
CBX4-201ENST00000269397 SSNA1O43805 119 aa25.53■■□□□ 1.68
CBX4-201ENST00000269397 IL9P15248 144 aa25.53■■□□□ 1.68
CBX4-201ENST00000269397 PYCR1P32322 319 aa25.53■■□□□ 1.68
CBX4-201ENST00000269397 P2RY2P41231 377 aa25.53■■□□□ 1.68
CBX4-201ENST00000269397 RFLNBQ8N5W9 214 aa25.53■■□□□ 1.68
CBX4-201ENST00000269397 SPERTQ8NA61 448 aa25.53■■□□□ 1.68
CBX4-201ENST00000269397 MSANTD3Q96H12 275 aa25.53■■□□□ 1.68
CBX4-201ENST00000269397 TEAD3Q99594 435 aa25.53■■□□□ 1.68
CBX4-201ENST00000269397 PRSS27Q9BQR3 290 aa25.53■■□□□ 1.68
CBX4-201ENST00000269397 IFT27Q9BW83 186 aa25.53■■□□□ 1.68
CBX4-201ENST00000269397 APOBEC3BQ9UH17 382 aaKnown RBP25.53■■□□□ 1.68
CBX4-201ENST00000269397 WDR45Q9Y484 360 aa25.53■■□□□ 1.68
CBX4-201ENST00000269397 BHLHE40O14503 412 aa25.52■■□□□ 1.68
CBX4-201ENST00000269397 SSX6Q7RTT6 188 aa25.52■■□□□ 1.68
CBX4-201ENST00000269397 ZNF681Q96N22 645 aa25.52■■□□□ 1.68
CBX4-201ENST00000269397 OR2M2Q96R28 347 aa25.52■■□□□ 1.68
CBX4-201ENST00000269397 ERVMER34-1Q9H9K5 563 aa25.52■■□□□ 1.68
CBX4-201ENST00000269397 CALML5Q9NZT1 146 aa25.52■■□□□ 1.68
CBX4-201ENST00000269397 ZNF780BQ9Y6R6 833 aa25.52■■□□□ 1.68
CBX4-201ENST00000269397 NPIPA5A0A0B4J1W7 369 aa25.52■■□□□ 1.68
CBX4-201ENST00000269397 CDHR4A6H8M9 788 aa25.52■■□□□ 1.68
CBX4-201ENST00000269397 PRR23AA6NEV1 266 aa25.52■■□□□ 1.68
CBX4-201ENST00000269397 NPIPA7E9PJI5 369 aa25.52■■□□□ 1.68
CBX4-201ENST00000269397 NPIPA8P0DM63 369 aa25.52■■□□□ 1.68
CBX4-201ENST00000269397 BMP7P18075 431 aa25.52■■□□□ 1.68
CBX4-201ENST00000269397 PRKACBP22694 351 aa25.52■■□□□ 1.68
CBX4-201ENST00000269397 PPM1AP35813 382 aa25.52■■□□□ 1.68
CBX4-201ENST00000269397 SNTA1Q13424 505 aa25.52■■□□□ 1.68
CBX4-201ENST00000269397 CAMK2DQ13557 499 aa25.52■■□□□ 1.68
CBX4-201ENST00000269397 KRT33BQ14525 404 aa25.52■■□□□ 1.68
CBX4-201ENST00000269397 TCEA2Q15560 299 aa25.52■■□□□ 1.68
CBX4-201ENST00000269397 GSG1Q2KHT4 349 aa25.52■■□□□ 1.68
CBX4-201ENST00000269397 GRASPQ7Z6J2 395 aaPredicted RBP25.52■■□□□ 1.68
CBX4-201ENST00000269397 TMIEQ8NEW7 156 aa25.52■■□□□ 1.68
CBX4-201ENST00000269397 OR13C2Q8NGS9 318 aa25.52■■□□□ 1.68
CBX4-201ENST00000269397 POF1BQ8WVV4 589 aa25.52■■□□□ 1.68
CBX4-201ENST00000269397 GHSRQ92847 366 aa25.52■■□□□ 1.68
CBX4-201ENST00000269397 MOAP1Q96BY2 351 aa25.52■■□□□ 1.68
CBX4-201ENST00000269397 SORCS2Q96PQ0 1159 aa25.52■■□□□ 1.68
CBX4-201ENST00000269397 CD180Q99467 661 aa25.52■■□□□ 1.68
CBX4-201ENST00000269397 PITHD1Q9GZP4 211 aaPredicted RBP25.52■■□□□ 1.68
CBX4-201ENST00000269397 PLPP2O43688 288 aa25.51■■□□□ 1.67
CBX4-201ENST00000269397 CFDP00746 253 aaPredicted RBP25.51■■□□□ 1.67
CBX4-201ENST00000269397 WNT1P04628 370 aa25.51■■□□□ 1.67
CBX4-201ENST00000269397 ATF1P18846 271 aa25.51■■□□□ 1.67
CBX4-201ENST00000269397 RAB3BP20337 219 aa25.51■■□□□ 1.67
CBX4-201ENST00000269397 DNASE1P24855 282 aa25.51■■□□□ 1.67
CBX4-201ENST00000269397 ZNF136P52737 540 aa25.51■■□□□ 1.67
CBX4-201ENST00000269397 CRYZQ08257 329 aaKnown RBP25.51■■□□□ 1.67
CBX4-201ENST00000269397 ELAVL3Q14576 367 aaKnown RBP25.51■■□□□ 1.67
CBX4-201ENST00000269397 COMMD7Q86VX2 200 aa25.51■■□□□ 1.67
CBX4-201ENST00000269397 OR2L5Q8NG80 312 aa25.51■■□□□ 1.67
CBX4-201ENST00000269397 GCDHQ92947 438 aaPredicted RBP25.51■■□□□ 1.67
CBX4-201ENST00000269397 CCDC86Q9H6F5 360 aaKnown RBP25.51■■□□□ 1.67
CBX4-201ENST00000269397 AUNIPQ9H7T9 357 aa25.51■■□□□ 1.67
CBX4-201ENST00000269397 BRD7Q9NPI1 651 aa25.51■■□□□ 1.67
CBX4-201ENST00000269397 MRPL39Q9NYK5 338 aaKnown RBP25.51■■□□□ 1.67
CBX4-201ENST00000269397 OTOL1A6NHN0 477 aaPredicted RBP25.51■■□□□ 1.67
CBX4-201ENST00000269397 H2AFB2P0C5Z0 115 aa25.51■■□□□ 1.67
CBX4-201ENST00000269397 M6PRP20645 277 aa25.51■■□□□ 1.67
CBX4-201ENST00000269397 RAB28P51157 221 aa25.51■■□□□ 1.67
CBX4-201ENST00000269397 ZNF267Q14586 743 aaPredicted RBP25.51■■□□□ 1.67
CBX4-201ENST00000269397 MBNL1Q9NR56 388 aaKnown RBP25.51■■□□□ 1.67
CBX4-201ENST00000269397 TRAV27A0A087WT01 109 aa25.5■■□□□ 1.67
CBX4-201ENST00000269397 PRR23D1E9PI22 279 aaPredicted RBP25.5■■□□□ 1.67
CBX4-201ENST00000269397 HPXP02790 462 aa25.5■■□□□ 1.67
CBX4-201ENST00000269397 PRR23D2P0DMB1 279 aaPredicted RBP25.5■■□□□ 1.67
CBX4-201ENST00000269397 HTR2AP28223 471 aa25.5■■□□□ 1.67
CBX4-201ENST00000269397 BTN3A2P78410 334 aa25.5■■□□□ 1.67
CBX4-201ENST00000269397 MAPK14Q16539 360 aa25.5■■□□□ 1.67
CBX4-201ENST00000269397 OR51A7Q8NH64 312 aa25.5■■□□□ 1.67
CBX4-201ENST00000269397 THAP4Q8WY91 577 aa25.5■■□□□ 1.67
CBX4-201ENST00000269397 PGLYRP3Q96LB9 341 aa25.5■■□□□ 1.67
CBX4-201ENST00000269397 HS6ST2Q96MM7 605 aa25.5■■□□□ 1.67
CBX4-201ENST00000269397 SPHK1Q9NYA1 384 aa25.5■■□□□ 1.67
CBX4-201ENST00000269397 FLVCR2Q9UPI3 526 aa25.5■■□□□ 1.67
CBX4-201ENST00000269397 ERVK-21P61565 698 aa25.5■■□□□ 1.67
CBX4-201ENST00000269397 POU6F2P78424 691 aaPredicted RBP25.5■■□□□ 1.67
CBX4-201ENST00000269397 FOXK2Q01167 660 aa25.5■■□□□ 1.67
CBX4-201ENST00000269397 ZNF85Q03923 595 aa25.5■■□□□ 1.67
CBX4-201ENST00000269397 KCT2Q8NC54 265 aa25.5■■□□□ 1.67
CBX4-201ENST00000269397 OR51Q1Q8NH59 317 aa25.5■■□□□ 1.67
CBX4-201ENST00000269397 BRIX1Q8TDN6 353 aaKnown RBP25.5■■□□□ 1.67
CBX4-201ENST00000269397 PEX11GQ96HA9 241 aa25.5■■□□□ 1.67
CBX4-201ENST00000269397 SLC9A3R1O14745 358 aaPredicted RBP25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms