RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 SMAD9O15198 467 aaKnown RBP8.17□□□□□ -1.1
VAPB-201ENST00000265619 EIF4E2O60573 245 aaKnown RBP8.17□□□□□ -1.1
VAPB-201ENST00000265619 OR2A4O95047 310 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 ETHE1O95571 254 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 CH25HO95992 272 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 ACTL6AO96019 429 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 GP1BAP07359 652 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 SRPRAP08240 638 aaKnown RBP8.17□□□□□ -1.1
VAPB-201ENST00000265619 CORO1AP31146 461 aaKnown RBP8.17□□□□□ -1.1
VAPB-201ENST00000265619 GDNFP39905 211 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 GCGRP47871 477 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 RPS26P62854 115 aaKnown RBP8.17□□□□□ -1.1
VAPB-201ENST00000265619 EEF1A1P68104 462 aaKnown RBP8.17□□□□□ -1.1
VAPB-201ENST00000265619 HBA1P69905 142 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 EEF1A2Q05639 463 aaKnown RBP8.17□□□□□ -1.1
VAPB-201ENST00000265619 ELAVL2Q12926 359 aaKnown RBP8.17□□□□□ -1.1
VAPB-201ENST00000265619 DDX39BQ13838 428 aaKnown RBP8.17□□□□□ -1.1
VAPB-201ENST00000265619 ZNF805Q5CZA5 627 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 EEF1A1P5Q5VTE0 462 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 HBMQ6B0K9 141 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 FBXO46Q6PJ61 603 aaPredicted RBP8.17□□□□□ -1.1
VAPB-201ENST00000265619 SLC7A13Q8TCU3 470 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 SMAP2Q8WU79 429 aaPredicted RBP8.17□□□□□ -1.1
VAPB-201ENST00000265619 MYLIPQ8WY64 445 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 POP5Q969H6 163 aaKnown RBP8.17□□□□□ -1.1
VAPB-201ENST00000265619 WBP2Q969T9 261 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 OR2A7Q96R45 310 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 TRIB3Q96RU7 358 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 MTERF1Q99551 399 aaKnown RBP8.17□□□□□ -1.1
VAPB-201ENST00000265619 GINS4Q9BRT9 223 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 TM6SF2Q9BZW4 377 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 FAM124BQ9H5Z6 455 aaPredicted RBP8.17□□□□□ -1.1
VAPB-201ENST00000265619 ACSS1Q9NUB1 689 aaPredicted RBP8.17□□□□□ -1.1
VAPB-201ENST00000265619 HCFC1R1Q9NWW0 138 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 OPN4Q9UHM6 478 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 YIPF1Q9Y548 306 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 VWA8A3KMH1 1905 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 ZNF106Q9H2Y7 1883 aaKnown RBP8.17□□□□□ -1.1
VAPB-201ENST00000265619 WASH3PC4AMC7 463 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 F5H5T6 163 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 KCNAB3O43448 404 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 GIPP09681 153 aaPredicted RBP8.17□□□□□ -1.1
VAPB-201ENST00000265619 VSIG10L2P0DP72 767 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 COL9A2Q14055 689 aaPredicted RBP8.17□□□□□ -1.1
VAPB-201ENST00000265619 ZNF235Q14590 738 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 LINC00303Q3SY05 128 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 MS4A13Q5J8X5 152 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 HEPHL1Q6MZM0 1159 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 TMEM71Q6P5X7 295 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 NCEH1Q6PIU2 408 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 NAXDQ8IW45 347 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 FAM26EQ8N5C1 309 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 ARRDC1Q8N5I2 433 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 HORMAD2Q8N7B1 307 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 GPR32P1Q8NGA4 272 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 BBS10Q8TAM1 723 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 DUSP26Q9BV47 211 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 HRASLSQ9HDD0 168 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 SAGE1Q9NXZ1 904 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 RASL12Q9NYN1 266 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 KLK11Q9UBX7 282 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 CXorf65A6NEN9 183 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 E9PI62 339 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 CHST10O43529 356 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 CLDN9O95484 217 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 LRG1P02750 347 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 PRPS2P11908 318 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 EPB42P16452 691 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 PBLDP30039 288 aaPredicted RBP8.17□□□□□ -1.1
VAPB-201ENST00000265619 BDKRB2P30411 391 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 CCR9P51686 369 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 EFNB1P98172 346 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 SORDQ00796 357 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 KIAA1161Q6NSJ0 714 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 HJURPQ8NCD3 748 aaPredicted RBP8.17□□□□□ -1.1
VAPB-201ENST00000265619 FBXO15Q8NCQ5 510 aaPredicted RBP8.17□□□□□ -1.1
VAPB-201ENST00000265619 SP7Q8TDD2 431 aaPredicted RBP8.17□□□□□ -1.1
VAPB-201ENST00000265619 HAVCR2Q8TDQ0 301 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 EID2BQ96D98 161 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 TBX5Q99593 518 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 PDCD10Q9BUL8 212 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 TBX21Q9UL17 535 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 PCDHB10Q9UN67 800 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 DHRS7Q9Y394 339 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 TMEM272A0A1B0GTI8 110 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 A8MVJ9 347 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 RAMP2O60895 175 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 EPHX1P07099 455 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 OR8U8P0C7N1 319 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 ACP2P11117 423 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 CNR1P21554 472 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 MNX1P50219 401 aaPredicted RBP8.16□□□□□ -1.1
VAPB-201ENST00000265619 CCR8P51685 355 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 RING1Q06587 406 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 PIN1Q13526 163 aaPredicted RBP8.16□□□□□ -1.1
VAPB-201ENST00000265619 EIF2S3LQ2VIR3 472 aaKnown RBP8.16□□□□□ -1.1
VAPB-201ENST00000265619 KLHL26Q53HC5 615 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 TCTN3Q6NUS6 607 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 H3F3CQ6NXT2 135 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 ZC3H14Q6PJT7 736 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms