RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 CRHBPP24387 322 aa16.91■□□□□ 0.3
COL5A3-201ENST00000264828 AHRP35869 848 aa16.91■□□□□ 0.3
COL5A3-201ENST00000264828 ZNF704Q6ZNC4 412 aaPredicted RBP16.91■□□□□ 0.3
COL5A3-201ENST00000264828 BRIX1Q8TDN6 353 aaKnown RBP16.91■□□□□ 0.3
COL5A3-201ENST00000264828 ITPKCQ96DU7 683 aa16.91■□□□□ 0.3
COL5A3-201ENST00000264828 ACPTQ9BZG2 426 aa16.91■□□□□ 0.3
COL5A3-201ENST00000264828 PLCXD1Q9NUJ7 323 aa16.91■□□□□ 0.3
COL5A3-201ENST00000264828 TP53TG5Q9Y2B4 290 aa16.91■□□□□ 0.3
COL5A3-201ENST00000264828 C5AR1P21730 350 aa16.91■□□□□ 0.3
COL5A3-201ENST00000264828 HOXD12P35452 270 aa16.91■□□□□ 0.3
COL5A3-201ENST00000264828 DAP3P51398 398 aaKnown RBP16.91■□□□□ 0.3
COL5A3-201ENST00000264828 C15orf39Q6ZRI6 1047 aa16.91■□□□□ 0.3
COL5A3-201ENST00000264828 IL1F10Q8WWZ1 152 aa16.91■□□□□ 0.3
COL5A3-201ENST00000264828 ZBTB8AQ96BR9 441 aa16.91■□□□□ 0.3
COL5A3-201ENST00000264828 GABRR3A8MPY1 467 aa16.91■□□□□ 0.3
COL5A3-201ENST00000264828 SRPX2O60687 465 aaPredicted RBP16.91■□□□□ 0.3
COL5A3-201ENST00000264828 CYBAP13498 195 aa16.91■□□□□ 0.3
COL5A3-201ENST00000264828 SERPINA2P20848 420 aa16.91■□□□□ 0.3
COL5A3-201ENST00000264828 BCL7AQ4VC05 210 aa16.91■□□□□ 0.3
COL5A3-201ENST00000264828 ZNF691Q5VV52 312 aa16.91■□□□□ 0.3
COL5A3-201ENST00000264828 CGB2Q6NT52 195 aa16.91■□□□□ 0.3
COL5A3-201ENST00000264828 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.91■□□□□ 0.3
COL5A3-201ENST00000264828 VRK2Q86Y07 508 aa16.91■□□□□ 0.3
COL5A3-201ENST00000264828 ZNF436Q9C0F3 470 aaPredicted RBP16.91■□□□□ 0.3
COL5A3-201ENST00000264828 ZFP57Q9NU63 452 aa16.91■□□□□ 0.3
COL5A3-201ENST00000264828 ATG4BQ9Y4P1 393 aa16.91■□□□□ 0.3
COL5A3-201ENST00000264828 HEMK1Q9Y5R4 338 aaPredicted RBP16.91■□□□□ 0.3
COL5A3-201ENST00000264828 A8MXE2 369 aa16.9■□□□□ 0.3
COL5A3-201ENST00000264828 TGM5O43548 720 aa16.9■□□□□ 0.3
COL5A3-201ENST00000264828 ITGB8P26012 769 aa16.9■□□□□ 0.3
COL5A3-201ENST00000264828 SEC61A1P61619 476 aaKnown RBP16.9■□□□□ 0.3
COL5A3-201ENST00000264828 SPOCK1Q08629 439 aa16.9■□□□□ 0.3
COL5A3-201ENST00000264828 PLXDC1Q8IUK5 500 aa16.9■□□□□ 0.3
COL5A3-201ENST00000264828 WDSUB1Q8N9V3 476 aa16.9■□□□□ 0.3
COL5A3-201ENST00000264828 IL26Q9NPH9 171 aa16.9■□□□□ 0.3
COL5A3-201ENST00000264828 MEGF11A6BM72 1044 aa16.9■□□□□ 0.3
COL5A3-201ENST00000264828 A6NHS1 94 aa16.9■□□□□ 0.3
COL5A3-201ENST00000264828 DNAJB6O75190 326 aa16.9■□□□□ 0.3
COL5A3-201ENST00000264828 ARHGEF15O94989 841 aa16.9■□□□□ 0.3
COL5A3-201ENST00000264828 HNRNPA1P09651 372 aaKnown RBP eCLIP16.9■□□□□ 0.3
COL5A3-201ENST00000264828 UBL4AP11441 157 aa16.9■□□□□ 0.3
COL5A3-201ENST00000264828 MAOBP27338 520 aa16.9■□□□□ 0.3
COL5A3-201ENST00000264828 APLNRP35414 380 aa16.9■□□□□ 0.3
COL5A3-201ENST00000264828 OR9K2Q8NGE7 335 aa16.9■□□□□ 0.3
COL5A3-201ENST00000264828 C3orf30Q96M34 536 aa16.9■□□□□ 0.3
COL5A3-201ENST00000264828 COPS3Q9UNS2 423 aa16.9■□□□□ 0.3
COL5A3-201ENST00000264828 PIGBOS1A0A0B4J2F0 54 aa16.9■□□□□ 0.3
COL5A3-201ENST00000264828 PRAF2O60831 178 aa16.9■□□□□ 0.3
COL5A3-201ENST00000264828 NUDT7P0C024 238 aa16.9■□□□□ 0.3
COL5A3-201ENST00000264828 RPS15P62841 145 aaKnown RBP16.9■□□□□ 0.3
COL5A3-201ENST00000264828 SLC7A13Q8TCU3 470 aa16.9■□□□□ 0.3
COL5A3-201ENST00000264828 NANOS1Q8WY41 292 aaKnown RBP16.9■□□□□ 0.3
COL5A3-201ENST00000264828 INTS14Q96SY0 518 aa16.9■□□□□ 0.3
COL5A3-201ENST00000264828 POLHQ9Y253 713 aa16.9■□□□□ 0.3
COL5A3-201ENST00000264828 GJE1A6NN92 205 aa16.9■□□□□ 0.3
COL5A3-201ENST00000264828 SULT1C2O00338 296 aa16.9■□□□□ 0.3
COL5A3-201ENST00000264828 ITGAMP11215 1152 aa16.9■□□□□ 0.3
COL5A3-201ENST00000264828 RRAS2P62070 204 aaPredicted RBP16.9■□□□□ 0.3
COL5A3-201ENST00000264828 ACY1Q03154 408 aa16.9■□□□□ 0.3
COL5A3-201ENST00000264828 EXOSC7Q15024 291 aaKnown RBP16.9■□□□□ 0.3
COL5A3-201ENST00000264828 MORN1Q5T089 497 aa16.9■□□□□ 0.3
COL5A3-201ENST00000264828 OR52R1Q8NGF1 315 aa16.9■□□□□ 0.3
COL5A3-201ENST00000264828 SNX18Q96RF0 628 aa16.9■□□□□ 0.3
COL5A3-201ENST00000264828 C21orf33P30042 268 aaPredicted RBP16.9■□□□□ 0.3
COL5A3-201ENST00000264828 RUNX3Q13761 415 aa16.9■□□□□ 0.3
COL5A3-201ENST00000264828 SLC22A6Q4U2R8 563 aa16.9■□□□□ 0.3
COL5A3-201ENST00000264828 PODNL1Q6PEZ8 512 aa16.9■□□□□ 0.3
COL5A3-201ENST00000264828 ZNF419Q96HQ0 510 aaPredicted RBP16.9■□□□□ 0.3
COL5A3-201ENST00000264828 SPIN2AQ99865 258 aa16.9■□□□□ 0.3
COL5A3-201ENST00000264828 SPIN2BQ9BPZ2 258 aa16.9■□□□□ 0.3
COL5A3-201ENST00000264828 PRSS21Q9Y6M0 314 aa16.9■□□□□ 0.3
COL5A3-201ENST00000264828 RGPD1P0DJD0 1748 aa16.9■□□□□ 0.3
COL5A3-201ENST00000264828 PPP6CO00743 305 aa16.89■□□□□ 0.3
COL5A3-201ENST00000264828 RAB31Q13636 194 aa16.89■□□□□ 0.3
COL5A3-201ENST00000264828 CCNJQ5T5M9 372 aa16.89■□□□□ 0.3
COL5A3-201ENST00000264828 OR4F15Q8NGB8 312 aa16.89■□□□□ 0.3
COL5A3-201ENST00000264828 GIMAP1Q8WWP7 306 aa16.89■□□□□ 0.3
COL5A3-201ENST00000264828 SLC6A16Q9GZN6 736 aa16.89■□□□□ 0.3
COL5A3-201ENST00000264828 V9GY05 133 aa16.89■□□□□ 0.3
COL5A3-201ENST00000264828 TSPAN11A1L157 253 aa16.89■□□□□ 0.29
COL5A3-201ENST00000264828 HOXB5P09067 269 aa16.89■□□□□ 0.29
COL5A3-201ENST00000264828 CDK4P11802 303 aa16.89■□□□□ 0.29
COL5A3-201ENST00000264828 BMP1P13497 986 aa16.89■□□□□ 0.29
COL5A3-201ENST00000264828 XCR1P46094 333 aa16.89■□□□□ 0.29
COL5A3-201ENST00000264828 FBXW12Q6X9E4 464 aa16.89■□□□□ 0.29
COL5A3-201ENST00000264828 CDRT4Q8N9R6 151 aa16.89■□□□□ 0.29
COL5A3-201ENST00000264828 IL4RP24394 825 aa16.89■□□□□ 0.29
COL5A3-201ENST00000264828 ENTPD8Q5MY95 495 aa16.89■□□□□ 0.29
COL5A3-201ENST00000264828 TSSK4Q6SA08 328 aa16.89■□□□□ 0.29
COL5A3-201ENST00000264828 RANBP10Q6VN20 620 aa16.89■□□□□ 0.29
COL5A3-201ENST00000264828 ZNF765Q7L2R6 523 aa16.89■□□□□ 0.29
COL5A3-201ENST00000264828 OR7G1Q8NGA0 311 aa16.89■□□□□ 0.29
COL5A3-201ENST00000264828 RTP4Q96DX8 246 aa16.89■□□□□ 0.29
COL5A3-201ENST00000264828 SLC38A1Q9H2H9 487 aa16.89■□□□□ 0.29
COL5A3-201ENST00000264828 RANGRFQ9HD47 186 aaPredicted RBP16.89■□□□□ 0.29
COL5A3-201ENST00000264828 SETD1AO15047 1707 aaKnown RBP16.89■□□□□ 0.29
COL5A3-201ENST00000264828 OR6C65A6NJZ3 312 aa16.89■□□□□ 0.29
COL5A3-201ENST00000264828 LILRB3O75022 631 aa16.89■□□□□ 0.29
COL5A3-201ENST00000264828 FGF4P08620 206 aa16.89■□□□□ 0.29
COL5A3-201ENST00000264828 RAB40BQ12829 278 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms