RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 RLIMQ9NVW2 624 aa16.66■□□□□ 0.26
SDF4-201ENST00000263741 CALML5Q9NZT1 146 aa16.66■□□□□ 0.26
SDF4-201ENST00000263741 VDAC3Q9Y277 283 aa16.66■□□□□ 0.26
SDF4-201ENST00000263741 SLC6A5Q9Y345 797 aa16.66■□□□□ 0.26
SDF4-201ENST00000263741 POLEQ07864 2286 aa16.66■□□□□ 0.26
SDF4-201ENST00000263741 A0A1B0GTH9 108 aa16.66■□□□□ 0.26
SDF4-201ENST00000263741 GTPBP1O00178 669 aaKnown RBP16.66■□□□□ 0.26
SDF4-201ENST00000263741 CSTAP01040 98 aa16.66■□□□□ 0.26
SDF4-201ENST00000263741 ENDOUP21128 410 aaKnown RBP16.66■□□□□ 0.26
SDF4-201ENST00000263741 ZNF630Q2M218 657 aaPredicted RBP16.66■□□□□ 0.26
SDF4-201ENST00000263741 REEP3Q6NUK4 255 aa16.66■□□□□ 0.26
SDF4-201ENST00000263741 ZNF836Q6ZNA1 936 aa16.66■□□□□ 0.26
SDF4-201ENST00000263741 FGD2Q7Z6J4 655 aa16.66■□□□□ 0.26
SDF4-201ENST00000263741 CALHM3Q86XJ0 350 aa16.66■□□□□ 0.26
SDF4-201ENST00000263741 OR52P1PQ8NH57 321 aa16.66■□□□□ 0.26
SDF4-201ENST00000263741 ZNF583Q96ND8 569 aa16.66■□□□□ 0.26
SDF4-201ENST00000263741 NPAS1Q99742 590 aa16.66■□□□□ 0.26
SDF4-201ENST00000263741 SH3GL1Q99961 368 aa16.66■□□□□ 0.26
SDF4-201ENST00000263741 EXO5Q9H790 373 aa16.66■□□□□ 0.26
SDF4-201ENST00000263741 MTHFD2LQ9H903 347 aaPredicted RBP16.66■□□□□ 0.26
SDF4-201ENST00000263741 POMPQ9Y244 141 aa16.66■□□□□ 0.26
SDF4-201ENST00000263741 FLNCQ14315 2725 aa16.65■□□□□ 0.26
SDF4-201ENST00000263741 H3BNH8 94 aa16.65■□□□□ 0.26
SDF4-201ENST00000263741 CBR3O75828 277 aa16.65■□□□□ 0.26
SDF4-201ENST00000263741 OPN1SWP03999 348 aa16.65■□□□□ 0.26
SDF4-201ENST00000263741 GUSBP08236 651 aa16.65■□□□□ 0.26
SDF4-201ENST00000263741 EDN3P14138 238 aa16.65■□□□□ 0.26
SDF4-201ENST00000263741 IL7RP16871 459 aa16.65■□□□□ 0.26
SDF4-201ENST00000263741 DPP4P27487 766 aa16.65■□□□□ 0.26
SDF4-201ENST00000263741 ERFP50548 548 aa16.65■□□□□ 0.26
SDF4-201ENST00000263741 SLC10A1Q14973 349 aa16.65■□□□□ 0.26
SDF4-201ENST00000263741 MRPL2Q5T653 305 aaKnown RBP16.65■□□□□ 0.26
SDF4-201ENST00000263741 PEX5LQ8IYB4 626 aa16.65■□□□□ 0.26
SDF4-201ENST00000263741 RNF148Q8N7C7 305 aa16.65■□□□□ 0.26
SDF4-201ENST00000263741 OR14L1PQ8NHC6 308 aa16.65■□□□□ 0.26
SDF4-201ENST00000263741 B4GALNT2Q8NHY0 566 aa16.65■□□□□ 0.26
SDF4-201ENST00000263741 BBS10Q8TAM1 723 aa16.65■□□□□ 0.26
SDF4-201ENST00000263741 CNOT9Q92600 299 aaKnown RBP16.65■□□□□ 0.26
SDF4-201ENST00000263741 ZNF524Q96C55 264 aa16.65■□□□□ 0.26
SDF4-201ENST00000263741 LDAHQ9H6V9 325 aa16.65■□□□□ 0.26
SDF4-201ENST00000263741 SPRR3Q9UBC9 169 aa16.65■□□□□ 0.26
SDF4-201ENST00000263741 ANGPT4Q9Y264 503 aa16.65■□□□□ 0.26
SDF4-201ENST00000263741 ZNF443Q9Y2A4 671 aaPredicted RBP16.65■□□□□ 0.26
SDF4-201ENST00000263741 MPDZO75970 2070 aa16.65■□□□□ 0.26
SDF4-201ENST00000263741 IGLV3-32A0A0A0MS00 114 aa16.65■□□□□ 0.26
SDF4-201ENST00000263741 C15orf38-AP3S2A0A0A6YYH1 394 aa16.65■□□□□ 0.26
SDF4-201ENST00000263741 A0A0G2JPF8 293 aa16.65■□□□□ 0.26
SDF4-201ENST00000263741 HNRNPCL2B2RXH8 293 aa16.65■□□□□ 0.26
SDF4-201ENST00000263741 HNRNPCL3B7ZW38 293 aa16.65■□□□□ 0.26
SDF4-201ENST00000263741 ZNF264O43296 627 aa16.65■□□□□ 0.26
SDF4-201ENST00000263741 WISP1O95388 367 aa16.65■□□□□ 0.26
SDF4-201ENST00000263741 HNRNPCL4P0DMR1 293 aa16.65■□□□□ 0.26
SDF4-201ENST00000263741 GNLYP22749 145 aa16.65■□□□□ 0.26
SDF4-201ENST00000263741 LIPEQ05469 1076 aa16.65■□□□□ 0.26
SDF4-201ENST00000263741 SKP2Q13309 424 aa16.65■□□□□ 0.26
SDF4-201ENST00000263741 GNA13Q14344 377 aa16.65■□□□□ 0.26
SDF4-201ENST00000263741 TRILQ7L0X0 811 aa16.65■□□□□ 0.26
SDF4-201ENST00000263741 ARPINQ7Z6K5 226 aa16.65■□□□□ 0.26
SDF4-201ENST00000263741 COMTD1Q86VU5 262 aa16.65■□□□□ 0.26
SDF4-201ENST00000263741 CHERPQ8IWX8 916 aaKnown RBP16.65■□□□□ 0.26
SDF4-201ENST00000263741 HIPK4Q8NE63 616 aa16.65■□□□□ 0.26
SDF4-201ENST00000263741 C1GALT1C1Q96EU7 318 aa16.65■□□□□ 0.26
SDF4-201ENST00000263741 BCL2L10Q9HD36 194 aa16.65■□□□□ 0.26
SDF4-201ENST00000263741 TAS2R10Q9NYW0 307 aa16.65■□□□□ 0.26
SDF4-201ENST00000263741 CHST2Q9Y4C5 530 aa16.65■□□□□ 0.26
SDF4-201ENST00000263741 KIAA1549Q9HCM3 1950 aa16.64■□□□□ 0.25
SDF4-201ENST00000263741 ANKUB1A6NFN9 424 aa16.64■□□□□ 0.25
SDF4-201ENST00000263741 ENO4A6NNW6 628 aa16.64■□□□□ 0.25
SDF4-201ENST00000263741 ADAM11O75078 769 aa16.64■□□□□ 0.25
SDF4-201ENST00000263741 GCM2O75603 506 aaPredicted RBP16.64■□□□□ 0.25
SDF4-201ENST00000263741 NUDT14O95848 222 aa16.64■□□□□ 0.25
SDF4-201ENST00000263741 HPNP05981 417 aa16.64■□□□□ 0.25
SDF4-201ENST00000263741 DBIP07108 87 aaKnown RBP16.64■□□□□ 0.25
SDF4-201ENST00000263741 PCGF2P35227 344 aa16.64■□□□□ 0.25
SDF4-201ENST00000263741 KCNJ10P78508 379 aa16.64■□□□□ 0.25
SDF4-201ENST00000263741 MED21Q13503 144 aa16.64■□□□□ 0.25
SDF4-201ENST00000263741 TOMM34Q15785 309 aaPredicted RBP16.64■□□□□ 0.25
SDF4-201ENST00000263741 VMACQ2NL98 169 aa16.64■□□□□ 0.25
SDF4-201ENST00000263741 REXO5Q96IC2 774 aaKnown RBP16.64■□□□□ 0.25
SDF4-201ENST00000263741 HOPXQ9BPY8 73 aaPredicted RBP16.64■□□□□ 0.25
SDF4-201ENST00000263741 SUCOQ9UBS9 1254 aaKnown RBP16.64■□□□□ 0.25
SDF4-201ENST00000263741 ICAM5Q9UMF0 924 aa16.64■□□□□ 0.25
SDF4-201ENST00000263741 TRGV5A0A0B4J1U4 118 aa16.63■□□□□ 0.25
SDF4-201ENST00000263741 FRS3O43559 492 aa16.63■□□□□ 0.25
SDF4-201ENST00000263741 NID1P14543 1247 aa16.63■□□□□ 0.25
SDF4-201ENST00000263741 PLA2G2AP14555 144 aa16.63■□□□□ 0.25
SDF4-201ENST00000263741 SRD5A2P31213 254 aa16.63■□□□□ 0.25
SDF4-201ENST00000263741 TRIP10Q15642 601 aa16.63■□□□□ 0.25
SDF4-201ENST00000263741 C3AR1Q16581 482 aa16.63■□□□□ 0.25
SDF4-201ENST00000263741 DCST1Q5T197 706 aa16.63■□□□□ 0.25
SDF4-201ENST00000263741 AP1ARQ63HQ0 302 aa16.63■□□□□ 0.25
SDF4-201ENST00000263741 EIF3MQ7L2H7 374 aaKnown RBP16.63■□□□□ 0.25
SDF4-201ENST00000263741 MISPQ8IVT2 679 aa16.63■□□□□ 0.25
SDF4-201ENST00000263741 GHDCQ8N2G8 530 aa16.63■□□□□ 0.25
SDF4-201ENST00000263741 CLIP4Q8N3C7 705 aa16.63■□□□□ 0.25
SDF4-201ENST00000263741 ST6GALNAC3Q8NDV1 305 aa16.63■□□□□ 0.25
SDF4-201ENST00000263741 OR2T12Q8NG77 320 aa16.63■□□□□ 0.25
SDF4-201ENST00000263741 RELTQ969Z4 430 aa16.63■□□□□ 0.25
SDF4-201ENST00000263741 OR2B2Q9GZK3 357 aa16.63■□□□□ 0.25
SDF4-201ENST00000263741 PLSCR2Q9NRY7 297 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms