RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 CSNK2BP67870 215 aa12.56□□□□□ -0.4
VMP1-201ENST00000262291 Q5BKY6 102 aa12.56□□□□□ -0.4
VMP1-201ENST00000262291 ARMCX4Q5H9R4 360 aa12.56□□□□□ -0.4
VMP1-201ENST00000262291 OGFOD3Q6PK18 319 aa12.56□□□□□ -0.4
VMP1-201ENST00000262291 HSDL2Q6YN16 418 aa12.56□□□□□ -0.4
VMP1-201ENST00000262291 SDR16C5Q8N3Y7 309 aa12.56□□□□□ -0.4
VMP1-201ENST00000262291 CAMKK1Q8N5S9 505 aa12.56□□□□□ -0.4
VMP1-201ENST00000262291 RCBTB1Q8NDN9 531 aa12.56□□□□□ -0.4
VMP1-201ENST00000262291 TEX47Q8TBZ9 253 aa12.56□□□□□ -0.4
VMP1-201ENST00000262291 GNPDA2Q8TDQ7 276 aa12.56□□□□□ -0.4
VMP1-201ENST00000262291 CLDN23Q96B33 292 aa12.56□□□□□ -0.4
VMP1-201ENST00000262291 ZDHHC12Q96GR4 267 aa12.56□□□□□ -0.4
VMP1-201ENST00000262291 BEX2Q9BXY8 128 aa12.56□□□□□ -0.4
VMP1-201ENST00000262291 TP53BP1Q12888 1972 aaPredicted RBP12.56□□□□□ -0.4
VMP1-201ENST00000262291 CENPXA8MT69 81 aa12.55□□□□□ -0.4
VMP1-201ENST00000262291 GMFGO60234 142 aa12.55□□□□□ -0.4
VMP1-201ENST00000262291 KIAA0513O60268 411 aa12.55□□□□□ -0.4
VMP1-201ENST00000262291 BRINP1O60477 761 aa12.55□□□□□ -0.4
VMP1-201ENST00000262291 SLITRK5O94991 958 aa12.55□□□□□ -0.4
VMP1-201ENST00000262291 NSA2O95478 260 aaKnown RBP12.55□□□□□ -0.4
VMP1-201ENST00000262291 DBIP07108 87 aaKnown RBP12.55□□□□□ -0.4
VMP1-201ENST00000262291 IFI30P13284 250 aa12.55□□□□□ -0.4
VMP1-201ENST00000262291 CDONQ4KMG0 1287 aa12.55□□□□□ -0.4
VMP1-201ENST00000262291 AGAP6Q5VW22 663 aa12.55□□□□□ -0.4
VMP1-201ENST00000262291 GJD3Q8N144 294 aa12.55□□□□□ -0.4
VMP1-201ENST00000262291 IL17RDQ8NFM7 739 aa12.55□□□□□ -0.4
VMP1-201ENST00000262291 OR4Q3Q8NH05 313 aa12.55□□□□□ -0.4
VMP1-201ENST00000262291 OR1L3Q8NH93 324 aa12.55□□□□□ -0.4
VMP1-201ENST00000262291 C16orf52Q8NHV5 167 aa12.55□□□□□ -0.4
VMP1-201ENST00000262291 AGAP4Q96P64 663 aa12.55□□□□□ -0.4
VMP1-201ENST00000262291 ENKD1Q9H0I2 346 aa12.55□□□□□ -0.4
VMP1-201ENST00000262291 CUTCQ9NTM9 273 aa12.55□□□□□ -0.4
VMP1-201ENST00000262291 FLRT3Q9NZU0 649 aa12.55□□□□□ -0.4
VMP1-201ENST00000262291 CPED1A4D0V7 1026 aa12.55□□□□□ -0.4
VMP1-201ENST00000262291 CDHR4A6H8M9 788 aa12.55□□□□□ -0.4
VMP1-201ENST00000262291 EFCAB9A8MZ26 197 aa12.55□□□□□ -0.4
VMP1-201ENST00000262291 CLDN4O14493 209 aa12.55□□□□□ -0.4
VMP1-201ENST00000262291 GIMD1P0DJR0 217 aa12.55□□□□□ -0.4
VMP1-201ENST00000262291 SOX3P41225 446 aa12.55□□□□□ -0.4
VMP1-201ENST00000262291 MAP3K8P41279 467 aa12.55□□□□□ -0.4
VMP1-201ENST00000262291 OR2B6P58173 313 aa12.55□□□□□ -0.4
VMP1-201ENST00000262291 TBCEQ15813 527 aaPredicted RBP12.55□□□□□ -0.4
VMP1-201ENST00000262291 TSTQ16762 297 aaKnown RBP12.55□□□□□ -0.4
VMP1-201ENST00000262291 SYT14P1Q58G82 188 aa12.55□□□□□ -0.4
VMP1-201ENST00000262291 VWA2Q5GFL6 755 aa12.55□□□□□ -0.4
VMP1-201ENST00000262291 PLAG1Q6DJT9 500 aa12.55□□□□□ -0.4
VMP1-201ENST00000262291 ACOT11Q8WXI4 607 aaPredicted RBP12.55□□□□□ -0.4
VMP1-201ENST00000262291 SAMD8Q96LT4 415 aa12.55□□□□□ -0.4
VMP1-201ENST00000262291 CHCHD6Q9BRQ6 235 aa12.55□□□□□ -0.4
VMP1-201ENST00000262291 SLC7A5P2Q9GIP4 190 aa12.55□□□□□ -0.4
VMP1-201ENST00000262291 RERGLQ9H628 205 aa12.55□□□□□ -0.4
VMP1-201ENST00000262291 SLC25A19Q9HC21 320 aa12.55□□□□□ -0.4
VMP1-201ENST00000262291 MRPS33Q9Y291 106 aaKnown RBP12.55□□□□□ -0.4
VMP1-201ENST00000262291 OR10H1Q9Y4A9 318 aa12.55□□□□□ -0.4
VMP1-201ENST00000262291 CACNA1EQ15878 2313 aa12.55□□□□□ -0.4
VMP1-201ENST00000262291 WWP2O00308 870 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 LRRTM2O43300 516 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 NKX2-2O95096 273 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 DBTP11182 482 aaKnown RBP12.54□□□□□ -0.4
VMP1-201ENST00000262291 MAKP20794 623 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 CLK1P49759 484 aaKnown RBP12.54□□□□□ -0.4
VMP1-201ENST00000262291 EFNA3P52797 238 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 CSTF1Q05048 431 aaKnown RBP12.54□□□□□ -0.4
VMP1-201ENST00000262291 SHBQ15464 509 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 EXOSC6Q5RKV6 272 aaKnown RBP12.54□□□□□ -0.4
VMP1-201ENST00000262291 SLC35F1Q5T1Q4 408 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 FCRLBQ6BAA4 426 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 SMARCD3Q6STE5 483 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 TMPRSS9Q7Z410 1059 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 OR6C4Q8NGE1 309 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 OR8J1Q8NGP2 316 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 DNASE2BQ8WZ79 361 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 LGALS12Q96DT0 336 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 STACQ99469 402 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 PRSS27Q9BQR3 290 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 PRRG3Q9BZD7 231 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 C14orf119Q9NWQ9 140 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 WDFY3Q8IZQ1 3526 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 ASCC3Q8N3C0 2202 aaKnown RBP12.54□□□□□ -0.4
VMP1-201ENST00000262291 A0A0G2JMP0 313 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 A0A0X1KG70 313 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 LINC00854A0A1B0GVQ3 168 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 EFCAB10A6NFE3 127 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 FAM183AA6NL82 134 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 AIREO43918 545 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 RPS4Y1P22090 263 aaKnown RBP12.54□□□□□ -0.4
VMP1-201ENST00000262291 HTR2BP41595 481 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 SNRPGP62308 76 aaKnown RBP12.54□□□□□ -0.4
VMP1-201ENST00000262291 CDK5Q00535 292 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 TSPAN31Q12999 210 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 ZNHIT3Q15649 155 aaPredicted RBP12.54□□□□□ -0.4
VMP1-201ENST00000262291 SLC36A4Q6YBV0 504 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 RANBP3LQ86VV4 465 aaPredicted RBP12.54□□□□□ -0.4
VMP1-201ENST00000262291 PRR22Q8IZ63 422 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 BBS1Q8NFJ9 593 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 OR5H6Q8NGV6 325 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 OR4C3Q8NH37 302 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 MAFAQ8NHW3 353 aaPredicted RBP12.54□□□□□ -0.4
VMP1-201ENST00000262291 RELTQ969Z4 430 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 ZHX1-C8orf76Q96EF9 292 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms