RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 ZIC2O95409 532 aaPredicted RBP16.99■□□□□ 0.31
CYSTM1-201ENST00000261811 NUDT7P0C024 238 aa16.99■□□□□ 0.31
CYSTM1-201ENST00000261811 UBTFL6P0CB48 400 aaPredicted RBP16.99■□□□□ 0.31
CYSTM1-201ENST00000261811 PEPDP12955 493 aa16.99■□□□□ 0.31
CYSTM1-201ENST00000261811 TCEA1P23193 301 aaKnown RBP16.99■□□□□ 0.31
CYSTM1-201ENST00000261811 GFRA1P56159 465 aa16.99■□□□□ 0.31
CYSTM1-201ENST00000261811 EEFSECP57772 596 aaKnown RBP16.99■□□□□ 0.31
CYSTM1-201ENST00000261811 CRYZQ08257 329 aaKnown RBP16.99■□□□□ 0.31
CYSTM1-201ENST00000261811 MAPK14Q16539 360 aa16.99■□□□□ 0.31
CYSTM1-201ENST00000261811 INTS11Q5TA45 600 aaKnown RBP16.99■□□□□ 0.31
CYSTM1-201ENST00000261811 CHMP1BQ7LBR1 199 aa16.99■□□□□ 0.31
CYSTM1-201ENST00000261811 FGD2Q7Z6J4 655 aa16.99■□□□□ 0.31
CYSTM1-201ENST00000261811 CHERPQ8IWX8 916 aaKnown RBP16.99■□□□□ 0.31
CYSTM1-201ENST00000261811 BHLHE22Q8NFJ8 381 aaPredicted RBP16.99■□□□□ 0.31
CYSTM1-201ENST00000261811 OR5M9Q8NGP3 310 aa16.99■□□□□ 0.31
CYSTM1-201ENST00000261811 NFKBIDQ8NI38 313 aa16.99■□□□□ 0.31
CYSTM1-201ENST00000261811 HOPXQ9BPY8 73 aaPredicted RBP16.99■□□□□ 0.31
CYSTM1-201ENST00000261811 VKORC1Q9BQB6 163 aa16.99■□□□□ 0.31
CYSTM1-201ENST00000261811 UGT2B28Q9BY64 529 aa16.99■□□□□ 0.31
CYSTM1-201ENST00000261811 QRSL1Q9H0R6 528 aaKnown RBP16.99■□□□□ 0.31
CYSTM1-201ENST00000261811 IKZF5Q9H5V7 419 aa16.99■□□□□ 0.31
CYSTM1-201ENST00000261811 EXOSC3Q9NQT5 275 aaKnown RBP16.99■□□□□ 0.31
CYSTM1-201ENST00000261811 PNPLA3Q9NST1 481 aa16.99■□□□□ 0.31
CYSTM1-201ENST00000261811 MED17Q9NVC6 651 aa16.99■□□□□ 0.31
CYSTM1-201ENST00000261811 ICAM5Q9UMF0 924 aa16.99■□□□□ 0.31
CYSTM1-201ENST00000261811 GPC6Q9Y625 555 aaPredicted RBP16.99■□□□□ 0.31
CYSTM1-201ENST00000261811 DSPPQ9NZW4 1301 aa16.99■□□□□ 0.31
CYSTM1-201ENST00000261811 MED12Q93074 2177 aa16.98■□□□□ 0.31
CYSTM1-201ENST00000261811 C7orf72A4D263 438 aa16.98■□□□□ 0.31
CYSTM1-201ENST00000261811 PRORSD1PA6NEY8 169 aa16.98■□□□□ 0.31
CYSTM1-201ENST00000261811 RPS4Y1P22090 263 aaKnown RBP16.98■□□□□ 0.31
CYSTM1-201ENST00000261811 ME2P23368 584 aa16.98■□□□□ 0.31
CYSTM1-201ENST00000261811 ACVR2AP27037 513 aa16.98■□□□□ 0.31
CYSTM1-201ENST00000261811 ADH6P28332 368 aa16.98■□□□□ 0.31
CYSTM1-201ENST00000261811 PGM1P36871 562 aa16.98■□□□□ 0.31
CYSTM1-201ENST00000261811 RNF144AP50876 292 aaPredicted RBP16.98■□□□□ 0.31
CYSTM1-201ENST00000261811 MNAT1P51948 309 aa16.98■□□□□ 0.31
CYSTM1-201ENST00000261811 SKP2Q13309 424 aa16.98■□□□□ 0.31
CYSTM1-201ENST00000261811 BCL2A1Q16548 175 aa16.98■□□□□ 0.31
CYSTM1-201ENST00000261811 ZNF311Q5JNZ3 666 aa16.98■□□□□ 0.31
CYSTM1-201ENST00000261811 ERICH5Q6P6B1 374 aa16.98■□□□□ 0.31
CYSTM1-201ENST00000261811 CBLN3Q6UW01 205 aa16.98■□□□□ 0.31
CYSTM1-201ENST00000261811 ARSKQ6UWY0 536 aa16.98■□□□□ 0.31
CYSTM1-201ENST00000261811 MEIOBQ8N635 442 aa16.98■□□□□ 0.31
CYSTM1-201ENST00000261811 OR10A6Q8NH74 314 aa16.98■□□□□ 0.31
CYSTM1-201ENST00000261811 ZNF563Q8TA94 476 aa16.98■□□□□ 0.31
CYSTM1-201ENST00000261811 ZG16BQ96DA0 208 aa16.98■□□□□ 0.31
CYSTM1-201ENST00000261811 ARSGQ96EG1 525 aa16.98■□□□□ 0.31
CYSTM1-201ENST00000261811 MEMO1Q9Y316 297 aa16.98■□□□□ 0.31
CYSTM1-201ENST00000261811 HRH3Q9Y5N1 445 aa16.98■□□□□ 0.31
CYSTM1-201ENST00000261811 AP4B1Q9Y6B7 739 aa16.98■□□□□ 0.31
CYSTM1-201ENST00000261811 FLNCQ14315 2725 aa16.98■□□□□ 0.31
CYSTM1-201ENST00000261811 OR2M5A3KFT3 312 aa16.97■□□□□ 0.31
CYSTM1-201ENST00000261811 ZNHIT1O43257 154 aa16.97■□□□□ 0.31
CYSTM1-201ENST00000261811 CPN1P15169 458 aa16.97■□□□□ 0.31
CYSTM1-201ENST00000261811 POU3F2P20265 443 aaPredicted RBP16.97■□□□□ 0.31
CYSTM1-201ENST00000261811 NUDT2P50583 147 aa16.97■□□□□ 0.31
CYSTM1-201ENST00000261811 SMSP52788 366 aa16.97■□□□□ 0.31
CYSTM1-201ENST00000261811 MAPK11Q15759 364 aa16.97■□□□□ 0.31
CYSTM1-201ENST00000261811 PLPPR5Q32ZL2 321 aa16.97■□□□□ 0.31
CYSTM1-201ENST00000261811 RPS26P11Q5JNZ5 115 aaPredicted RBP16.97■□□□□ 0.31
CYSTM1-201ENST00000261811 HACD2Q6Y1H2 254 aa16.97■□□□□ 0.31
CYSTM1-201ENST00000261811 TREML1Q86YW5 311 aa16.97■□□□□ 0.31
CYSTM1-201ENST00000261811 GTPBP8Q8N3Z3 284 aaPredicted RBP16.97■□□□□ 0.31
CYSTM1-201ENST00000261811 GPR119Q8TDV5 335 aa16.97■□□□□ 0.31
CYSTM1-201ENST00000261811 PHF10Q8WUB8 498 aaKnown RBP16.97■□□□□ 0.31
CYSTM1-201ENST00000261811 ST8SIA1Q92185 356 aa16.97■□□□□ 0.31
CYSTM1-201ENST00000261811 SLC39A3Q9BRY0 314 aa16.97■□□□□ 0.31
CYSTM1-201ENST00000261811 PRDM14Q9GZV8 571 aa16.97■□□□□ 0.31
CYSTM1-201ENST00000261811 TNFRSF10DQ9UBN6 386 aa16.97■□□□□ 0.31
CYSTM1-201ENST00000261811 SLC13A4Q9UKG4 626 aa16.97■□□□□ 0.31
CYSTM1-201ENST00000261811 ZNF443Q9Y2A4 671 aaPredicted RBP16.97■□□□□ 0.31
CYSTM1-201ENST00000261811 PCNX1Q96RV3 2341 aa16.97■□□□□ 0.31
CYSTM1-201ENST00000261811 CENPVL1A0A0U1RR11 272 aa16.96■□□□□ 0.31
CYSTM1-201ENST00000261811 GJE1A6NN92 205 aa16.96■□□□□ 0.31
CYSTM1-201ENST00000261811 B4DXG7 233 aa16.96■□□□□ 0.31
CYSTM1-201ENST00000261811 H0Y3Z8 333 aa16.96■□□□□ 0.31
CYSTM1-201ENST00000261811 H3BML4 177 aa16.96■□□□□ 0.31
CYSTM1-201ENST00000261811 LINGO3P0C6S8 592 aa16.96■□□□□ 0.31
CYSTM1-201ENST00000261811 PABPC4LP0CB38 370 aaKnown RBP16.96■□□□□ 0.31
CYSTM1-201ENST00000261811 SELPLGQ14242 412 aa16.96■□□□□ 0.31
CYSTM1-201ENST00000261811 NDUFAF6Q330K2 333 aa16.96■□□□□ 0.31
CYSTM1-201ENST00000261811 MRPL2Q5T653 305 aaKnown RBP16.96■□□□□ 0.31
CYSTM1-201ENST00000261811 C1orf185Q5T7R7 199 aa16.96■□□□□ 0.31
CYSTM1-201ENST00000261811 RNF220Q5VTB9 566 aa16.96■□□□□ 0.31
CYSTM1-201ENST00000261811 B3GNT6Q6ZMB0 384 aa16.96■□□□□ 0.31
CYSTM1-201ENST00000261811 ZNF550Q7Z398 422 aa16.96■□□□□ 0.31
CYSTM1-201ENST00000261811 NET1Q7Z628 596 aaPredicted RBP16.96■□□□□ 0.31
CYSTM1-201ENST00000261811 HMGN2P46Q86SG4 172 aa16.96■□□□□ 0.31
CYSTM1-201ENST00000261811 FAM71CQ8NEG0 241 aa16.96■□□□□ 0.31
CYSTM1-201ENST00000261811 BCAS4Q8TDM0 211 aa16.96■□□□□ 0.31
CYSTM1-201ENST00000261811 SLC26A7Q8TE54 656 aa16.96■□□□□ 0.31
CYSTM1-201ENST00000261811 MRGPRX4Q96LA9 322 aa16.96■□□□□ 0.31
CYSTM1-201ENST00000261811 SERINC1Q9NRX5 453 aa16.96■□□□□ 0.31
CYSTM1-201ENST00000261811 NDE1Q9NXR1 346 aa16.96■□□□□ 0.31
CYSTM1-201ENST00000261811 TENM4Q6N022 2769 aa16.96■□□□□ 0.31
CYSTM1-201ENST00000261811 CDHR4A6H8M9 788 aa16.96■□□□□ 0.3
CYSTM1-201ENST00000261811 FXYD1O00168 92 aa16.96■□□□□ 0.3
CYSTM1-201ENST00000261811 ELK4P28324 431 aa16.96■□□□□ 0.3
CYSTM1-201ENST00000261811 PCGF2P35227 344 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms