RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 MTHFD2LQ9H903 347 aaPredicted RBP15.2■□□□□ 0.02
SREBF1-201ENST00000261646 SOX18P35713 384 aa15.19■□□□□ 0.02
SREBF1-201ENST00000261646 TRIM23P36406 574 aa15.19■□□□□ 0.02
SREBF1-201ENST00000261646 FRKP42685 505 aaPredicted RBP15.19■□□□□ 0.02
SREBF1-201ENST00000261646 SIM1P81133 766 aaPredicted RBP15.19■□□□□ 0.02
SREBF1-201ENST00000261646 ENTPD8Q5MY95 495 aa15.19■□□□□ 0.02
SREBF1-201ENST00000261646 CLVS2Q5SYC1 327 aa15.19■□□□□ 0.02
SREBF1-201ENST00000261646 TCTN3Q6NUS6 607 aa15.19■□□□□ 0.02
SREBF1-201ENST00000261646 OR6V1Q8N148 313 aa15.19■□□□□ 0.02
SREBF1-201ENST00000261646 LSMEM1Q8N8F7 131 aa15.19■□□□□ 0.02
SREBF1-201ENST00000261646 SDR9C7Q8NEX9 313 aa15.19■□□□□ 0.02
SREBF1-201ENST00000261646 IGSF21Q96ID5 467 aa15.19■□□□□ 0.02
SREBF1-201ENST00000261646 RAD9AQ99638 391 aa15.19■□□□□ 0.02
SREBF1-201ENST00000261646 BIN3Q9NQY0 253 aa15.19■□□□□ 0.02
SREBF1-201ENST00000261646 CDC40O60508 579 aaKnown RBP eCLIP15.19■□□□□ 0.02
SREBF1-201ENST00000261646 SCGB1D2O95969 90 aa15.19■□□□□ 0.02
SREBF1-201ENST00000261646 PPP3CBP16298 524 aa15.19■□□□□ 0.02
SREBF1-201ENST00000261646 AANATQ16613 207 aa15.19■□□□□ 0.02
SREBF1-201ENST00000261646 ZNF385BQ569K4 471 aa15.19■□□□□ 0.02
SREBF1-201ENST00000261646 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.19■□□□□ 0.022e-15■■■□□ 19.1
SREBF1-201ENST00000261646 C10orf111Q8N326 155 aa15.19■□□□□ 0.02
SREBF1-201ENST00000261646 DUSP19Q8WTR2 217 aa15.19■□□□□ 0.02
SREBF1-201ENST00000261646 TMEM239Q8WW34 195 aa15.19■□□□□ 0.02
SREBF1-201ENST00000261646 CEP290O15078 2479 aa15.19■□□□□ 0.02
SREBF1-201ENST00000261646 H3BUI4 141 aa15.19■□□□□ 0.02
SREBF1-201ENST00000261646 CLDN4O14493 209 aa15.19■□□□□ 0.02
SREBF1-201ENST00000261646 RNASE10Q5GAN6 216 aaKnown RBP15.19■□□□□ 0.02
SREBF1-201ENST00000261646 GLT8D1Q68CQ7 371 aa15.19■□□□□ 0.02
SREBF1-201ENST00000261646 ZER1Q7Z7L7 766 aa15.19■□□□□ 0.02
SREBF1-201ENST00000261646 HCAR2Q8TDS4 363 aa15.19■□□□□ 0.02
SREBF1-201ENST00000261646 CHTF18Q8WVB6 975 aa15.19■□□□□ 0.02
SREBF1-201ENST00000261646 C1QTNF2Q9BXJ5 285 aa15.19■□□□□ 0.02
SREBF1-201ENST00000261646 SPNS1Q9H2V7 528 aa15.19■□□□□ 0.02
SREBF1-201ENST00000261646 PLEKHA1Q9HB21 404 aa15.19■□□□□ 0.02
SREBF1-201ENST00000261646 ASB6Q9NWX5 421 aa15.19■□□□□ 0.02
SREBF1-201ENST00000261646 ACOD1A6NK06 481 aa15.18■□□□□ 0.02
SREBF1-201ENST00000261646 RAB3DO95716 219 aa15.18■□□□□ 0.02
SREBF1-201ENST00000261646 SYPP08247 313 aa15.18■□□□□ 0.02
SREBF1-201ENST00000261646 AKR1C4P17516 323 aa15.18■□□□□ 0.02
SREBF1-201ENST00000261646 LAG3P18627 525 aa15.18■□□□□ 0.02
SREBF1-201ENST00000261646 NNATQ16517 81 aa15.18■□□□□ 0.02
SREBF1-201ENST00000261646 V9GY05 133 aa15.18■□□□□ 0.02
SREBF1-201ENST00000261646 DLSTP36957 453 aa15.18■□□□□ 0.02
SREBF1-201ENST00000261646 DGCR2P98153 550 aa15.18■□□□□ 0.02
SREBF1-201ENST00000261646 ESPNLQ6ZVH7 1005 aa15.18■□□□□ 0.02
SREBF1-201ENST00000261646 OR9A2Q8NGT5 310 aa15.18■□□□□ 0.02
SREBF1-201ENST00000261646 ARL11Q969Q4 196 aa15.18■□□□□ 0.02
SREBF1-201ENST00000261646 MYEF2Q9P2K5 600 aaKnown RBP15.18■□□□□ 0.02
SREBF1-201ENST00000261646 LGALS8O00214 317 aa15.18■□□□□ 0.02
SREBF1-201ENST00000261646 ACTR1BP42025 376 aa15.18■□□□□ 0.02
SREBF1-201ENST00000261646 ACTR1AP61163 376 aa15.18■□□□□ 0.02
SREBF1-201ENST00000261646 MPP7Q5T2T1 576 aa15.18■□□□□ 0.02
SREBF1-201ENST00000261646 FBXO42Q6P3S6 717 aa15.18■□□□□ 0.02
SREBF1-201ENST00000261646 CPA6Q8N4T0 437 aa15.18■□□□□ 0.02
SREBF1-201ENST00000261646 FIBINQ8TAL6 211 aa15.18■□□□□ 0.02
SREBF1-201ENST00000261646 C20orf85Q9H1P6 137 aa15.18■□□□□ 0.02
SREBF1-201ENST00000261646 RXFP3Q9NSD7 469 aa15.18■□□□□ 0.02
SREBF1-201ENST00000261646 TDP1Q9NUW8 608 aa15.18■□□□□ 0.02
SREBF1-201ENST00000261646 GRHPRQ9UBQ7 328 aa15.18■□□□□ 0.02
SREBF1-201ENST00000261646 TRAV27A0A087WT01 109 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 VNN2O95498 520 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 SFTPBP07988 381 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 HBQ1P09105 142 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 CR2P20023 1033 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 MRPL19P49406 292 aaKnown RBP15.17■□□□□ 0.02
SREBF1-201ENST00000261646 ALG10BQ5I7T1 473 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 VITQ6UXI7 678 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 TMEM25Q86YD3 366 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 GATSQ8NAP1 163 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 IRF7Q92985 503 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 LINC00597Q9H2U6 94 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 C1GALT1Q9NS00 363 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 NPIPA5A0A0B4J1W7 369 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 NPIPA7E9PJI5 369 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 RFXAPO00287 272 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 STK25O00506 426 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 RAD1O60671 282 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 TGM6O95932 706 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 NPIPA8P0DM63 369 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 ZNF250P15622 560 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 PTBP1P26599 531 aaKnown RBP eCLIP15.17■□□□□ 0.02
SREBF1-201ENST00000261646 CRYBB2P43320 205 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 HYAL2Q12891 473 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 TPBGQ13641 420 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 AMZ1Q400G9 498 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 C6orf132Q5T0Z8 1188 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 KIAA1211LQ6NV74 962 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 ULK3Q6PHR2 472 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 TCEAL3Q969E4 200 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 C16orf58Q96GQ5 468 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 TMEM41AQ96HV5 264 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 MSLNLQ96KJ4 702 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 ACTRT3Q9BYD9 372 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 ZNF700Q9H0M5 742 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 MVB12BQ9H7P6 319 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 SBF2Q86WG5 1849 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 C1orf105O95561 183 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 UGT2B7P16662 529 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 SDHBP21912 280 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 ACTBP60709 375 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms