RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 HOXD1Q9GZZ0 328 aa16.99■□□□□ 0.31
TM6SF1-201ENST00000258909 FREM1Q5H8C1 2179 aa16.99■□□□□ 0.31
TM6SF1-201ENST00000258909 SMPD2O60906 423 aa16.98■□□□□ 0.31
TM6SF1-201ENST00000258909 KRT16P08779 473 aa16.98■□□□□ 0.31
TM6SF1-201ENST00000258909 AGTR1P30556 359 aa16.98■□□□□ 0.31
TM6SF1-201ENST00000258909 EIF1P41567 113 aaKnown RBP16.98■□□□□ 0.31
TM6SF1-201ENST00000258909 P2RX1P51575 399 aa16.98■□□□□ 0.31
TM6SF1-201ENST00000258909 ATP12AP54707 1039 aa16.98■□□□□ 0.31
TM6SF1-201ENST00000258909 CASP9P55211 416 aa16.98■□□□□ 0.31
TM6SF1-201ENST00000258909 EMX2Q04743 252 aa16.98■□□□□ 0.31
TM6SF1-201ENST00000258909 OR4F3Q6IEY1 312 aa16.98■□□□□ 0.31
TM6SF1-201ENST00000258909 NATD1Q8N6N6 113 aa16.98■□□□□ 0.31
TM6SF1-201ENST00000258909 ZNF781Q8N8C0 355 aa16.98■□□□□ 0.31
TM6SF1-201ENST00000258909 SFXN5Q8TD22 340 aa16.98■□□□□ 0.31
TM6SF1-201ENST00000258909 ABHD3Q8WU67 409 aa16.98■□□□□ 0.31
TM6SF1-201ENST00000258909 SERHL2Q9H4I8 314 aa16.98■□□□□ 0.31
TM6SF1-201ENST00000258909 NPIPB9F8W1W9 429 aa16.97■□□□□ 0.31
TM6SF1-201ENST00000258909 H3BNH8 94 aa16.97■□□□□ 0.31
TM6SF1-201ENST00000258909 ZNF195O14628 629 aa16.97■□□□□ 0.31
TM6SF1-201ENST00000258909 CLDN8P56748 225 aa16.97■□□□□ 0.31
TM6SF1-201ENST00000258909 CHI3L2Q15782 390 aa16.97■□□□□ 0.31
TM6SF1-201ENST00000258909 ZNF239Q16600 458 aaKnown RBP16.97■□□□□ 0.31
TM6SF1-201ENST00000258909 KRT71Q3SY84 523 aa16.97■□□□□ 0.31
TM6SF1-201ENST00000258909 TMEM176BQ3YBM2 270 aaPredicted RBP16.97■□□□□ 0.31
TM6SF1-201ENST00000258909 Q5PR19 223 aa16.97■□□□□ 0.31
TM6SF1-201ENST00000258909 ALKBH2Q6NS38 261 aa16.97■□□□□ 0.31
TM6SF1-201ENST00000258909 C6orf120Q7Z4R8 191 aa16.97■□□□□ 0.31
TM6SF1-201ENST00000258909 WFDC8Q8IUA0 241 aa16.97■□□□□ 0.31
TM6SF1-201ENST00000258909 P3H2Q8IVL5 708 aa16.97■□□□□ 0.31
TM6SF1-201ENST00000258909 TMCO5AQ8N6Q1 288 aa16.97■□□□□ 0.31
TM6SF1-201ENST00000258909 GPR119Q8TDV5 335 aa16.97■□□□□ 0.31
TM6SF1-201ENST00000258909 MOAP1Q96BY2 351 aa16.97■□□□□ 0.31
TM6SF1-201ENST00000258909 C18orf12Q96KH6 178 aa16.97■□□□□ 0.31
TM6SF1-201ENST00000258909 SDF2Q99470 211 aa16.97■□□□□ 0.31
TM6SF1-201ENST00000258909 CCL19Q99731 98 aa16.97■□□□□ 0.31
TM6SF1-201ENST00000258909 C20orf27Q9GZN8 174 aa16.97■□□□□ 0.31
TM6SF1-201ENST00000258909 AKTIPQ9H8T0 292 aa16.97■□□□□ 0.31
TM6SF1-201ENST00000258909 GLRX2Q9NS18 164 aa16.97■□□□□ 0.31
TM6SF1-201ENST00000258909 DTNAQ9Y4J8 743 aa16.97■□□□□ 0.31
TM6SF1-201ENST00000258909 RAI1Q7Z5J4 1906 aaPredicted RBP16.96■□□□□ 0.31
TM6SF1-201ENST00000258909 NSD1Q96L73 2696 aaPredicted RBP16.96■□□□□ 0.31
TM6SF1-201ENST00000258909 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.96■□□□□ 0.31
TM6SF1-201ENST00000258909 KLF4O43474 513 aa16.96■□□□□ 0.31
TM6SF1-201ENST00000258909 TUBBP07437 444 aa16.96■□□□□ 0.31
TM6SF1-201ENST00000258909 PRKCAP17252 672 aa16.96■□□□□ 0.31
TM6SF1-201ENST00000258909 MATN1P21941 496 aa16.96■□□□□ 0.31
TM6SF1-201ENST00000258909 CCR4P51679 360 aa16.96■□□□□ 0.31
TM6SF1-201ENST00000258909 GPR68Q15743 365 aa16.96■□□□□ 0.31
TM6SF1-201ENST00000258909 PDZK1Q5T2W1 519 aa16.96■□□□□ 0.31
TM6SF1-201ENST00000258909 SHEQ5VZ18 495 aa16.96■□□□□ 0.31
TM6SF1-201ENST00000258909 WDR93Q6P2C0 686 aa16.96■□□□□ 0.31
TM6SF1-201ENST00000258909 NUFIP2Q7Z417 695 aaKnown RBP16.96■□□□□ 0.31
TM6SF1-201ENST00000258909 PIGTQ969N2 578 aa16.96■□□□□ 0.31
TM6SF1-201ENST00000258909 REXO5Q96IC2 774 aaKnown RBP16.96■□□□□ 0.31
TM6SF1-201ENST00000258909 TMEM109Q9BVC6 243 aa16.96■□□□□ 0.31
TM6SF1-201ENST00000258909 ACTR6Q9GZN1 396 aa16.96■□□□□ 0.31
TM6SF1-201ENST00000258909 NOP53Q9NZM5 478 aaKnown RBP16.96■□□□□ 0.31
TM6SF1-201ENST00000258909 IGHV3-15A0A0B4J1V0 119 aa16.95■□□□□ 0.3
TM6SF1-201ENST00000258909 CENPVL1A0A0U1RR11 272 aa16.95■□□□□ 0.3
TM6SF1-201ENST00000258909 FCMRO60667 390 aa16.95■□□□□ 0.3
TM6SF1-201ENST00000258909 NID1P14543 1247 aa16.95■□□□□ 0.3
TM6SF1-201ENST00000258909 ELK4P28324 431 aa16.95■□□□□ 0.3
TM6SF1-201ENST00000258909 ADSLP30566 484 aaPredicted RBP16.95■□□□□ 0.3
TM6SF1-201ENST00000258909 ABCE1P61221 599 aaKnown RBP16.95■□□□□ 0.3
TM6SF1-201ENST00000258909 ZNF844Q08AG5 666 aa16.95■□□□□ 0.3
TM6SF1-201ENST00000258909 MAD2L1Q13257 205 aaPredicted RBP16.95■□□□□ 0.3
TM6SF1-201ENST00000258909 TSC22D1Q15714 1073 aa16.95■□□□□ 0.3
TM6SF1-201ENST00000258909 BEND4Q6ZU67 534 aa16.95■□□□□ 0.3
TM6SF1-201ENST00000258909 STK32CQ86UX6 486 aa16.95■□□□□ 0.3
TM6SF1-201ENST00000258909 TUSC5Q8IXB3 177 aa16.95■□□□□ 0.3
TM6SF1-201ENST00000258909 RNF128Q8TEB7 428 aa16.95■□□□□ 0.3
TM6SF1-201ENST00000258909 PERPQ96FX8 193 aa16.95■□□□□ 0.3
TM6SF1-201ENST00000258909 COQ10BQ9H8M1 238 aa16.95■□□□□ 0.3
TM6SF1-201ENST00000258909 KCNE5Q9UJ90 142 aa16.95■□□□□ 0.3
TM6SF1-201ENST00000258909 ACTL7BQ9Y614 415 aa16.95■□□□□ 0.3
TM6SF1-201ENST00000258909 GPC6Q9Y625 555 aaPredicted RBP16.95■□□□□ 0.3
TM6SF1-201ENST00000258909 ZANQ9Y493 2812 aa16.94■□□□□ 0.3
TM6SF1-201ENST00000258909 RNF103-CHMP3A0A140T963 221 aa16.94■□□□□ 0.3
TM6SF1-201ENST00000258909 A0A1W2PNR3 127 aa16.94■□□□□ 0.3
TM6SF1-201ENST00000258909 RGS16O15492 202 aaPredicted RBP16.94■□□□□ 0.3
TM6SF1-201ENST00000258909 ZNF264O43296 627 aa16.94■□□□□ 0.3
TM6SF1-201ENST00000258909 ARHGEF9O43307 516 aa16.94■□□□□ 0.3
TM6SF1-201ENST00000258909 CYP7B1O75881 506 aa16.94■□□□□ 0.3
TM6SF1-201ENST00000258909 PLAUP00749 431 aa16.94■□□□□ 0.3
TM6SF1-201ENST00000258909 SERPINE1P05121 402 aa16.94■□□□□ 0.3
TM6SF1-201ENST00000258909 INHBBP09529 407 aa16.94■□□□□ 0.3
TM6SF1-201ENST00000258909 UBL4AP11441 157 aa16.94■□□□□ 0.3
TM6SF1-201ENST00000258909 FPR1P21462 350 aa16.94■□□□□ 0.3
TM6SF1-201ENST00000258909 ADH6P28332 368 aa16.94■□□□□ 0.3
TM6SF1-201ENST00000258909 SUMO3P55854 103 aaPredicted RBP16.94■□□□□ 0.3
TM6SF1-201ENST00000258909 C21orf58P58505 322 aa16.94■□□□□ 0.3
TM6SF1-201ENST00000258909 QPRTQ15274 297 aa16.94■□□□□ 0.3
TM6SF1-201ENST00000258909 TMEM201Q5SNT2 666 aa16.94■□□□□ 0.3
TM6SF1-201ENST00000258909 GTF2IRD2BQ6EKJ0 949 aa16.94■□□□□ 0.3
TM6SF1-201ENST00000258909 BHLHB9Q6PI77 547 aa16.94■□□□□ 0.3
TM6SF1-201ENST00000258909 BIVMQ86UB2 503 aa16.94■□□□□ 0.3
TM6SF1-201ENST00000258909 GTF2IRD2Q86UP8 949 aa16.94■□□□□ 0.3
TM6SF1-201ENST00000258909 ANKRD46Q86W74 232 aa16.94■□□□□ 0.3
TM6SF1-201ENST00000258909 OR4A15Q8NGL6 344 aa16.94■□□□□ 0.3
TM6SF1-201ENST00000258909 CPNE4Q96A23 557 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms