RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 UPRTQ96BW1 309 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 PGAP3Q96FM1 320 aaPredicted RBP4.53□□□□□ -1.68
RC3H1-201ENST00000258349 TMEM19Q96HH6 336 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 TXNDC15Q96J42 360 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 NMNAT1Q9HAN9 279 aaPredicted RBP4.53□□□□□ -1.68
RC3H1-201ENST00000258349 C1orf123Q9NWV4 160 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 KLHL42Q9P2K6 505 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 GHRLQ9UBU3 117 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 REV1Q9UBZ9 1251 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 NDUFB2O95178 105 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 ACP2P11117 423 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 CDK4P11802 303 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 GGT5P36269 586 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 RPL35P42766 123 aaKnown RBP4.53□□□□□ -1.68
RC3H1-201ENST00000258349 WDR5P61964 334 aaKnown RBP4.53□□□□□ -1.68
RC3H1-201ENST00000258349 EIF2B1Q14232 305 aaKnown RBP4.53□□□□□ -1.68
RC3H1-201ENST00000258349 CMIPQ8IY22 773 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 ZNF679Q8IYX0 411 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 TMEM163Q8TC26 289 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 LMF1Q96S06 567 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 CWH43Q9H720 699 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 GKN1Q9NS71 199 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 ZNF443Q9Y2A4 671 aaPredicted RBP4.53□□□□□ -1.68
RC3H1-201ENST00000258349 ZNF281Q9Y2X9 895 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 DNAJC15Q9Y5T4 150 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 MYOCOSA0A1B0GUC4 107 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 OTOL1A6NHN0 477 aaPredicted RBP4.53□□□□□ -1.68
RC3H1-201ENST00000258349 MED6O75586 246 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 SCGB1D1O95968 90 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 DHRS4L1P0CG22 281 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 CHRNB1P11230 501 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 CRHBPP24387 322 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 ZNF791Q3KP31 576 aaPredicted RBP4.53□□□□□ -1.68
RC3H1-201ENST00000258349 DEFB134Q4QY38 66 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 WBP2NLQ6ICG8 309 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 LETMD1Q6P1Q0 360 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 LRFN4Q6PJG9 635 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 PDZD3Q86UT5 571 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 OR5D16Q8NGK9 328 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 OR4K13Q8NH42 304 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 RELTQ969Z4 430 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 PTCHD1Q96NR3 888 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 OR52A5Q9H2C5 316 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 RDH14Q9HBH5 336 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 MED17Q9NVC6 651 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 KCNK6Q9Y257 313 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 LCMT2O60294 686 aaKnown RBP4.52□□□□□ -1.69
RC3H1-201ENST00000258349 KCNK5O95279 499 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 LAMP1P11279 417 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 ERVPABLB-1P60509 514 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 PCBD1P61457 104 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 HBG1P69891 147 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 HBG2P69892 147 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 NSDHLQ15738 373 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 FAM205BPQ63HN1 556 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 KDELC1Q6UW63 502 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 WDR88Q6ZMY6 472 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 GIMAP1Q8WWP7 306 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 FCRL1Q96LA6 429 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 PLCXD1Q9NUJ7 323 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 CACNG4Q9UBN1 327 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 TGM5O43548 720 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 ELK1P19419 428 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 MC3RP41968 323 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 DHPSP49366 369 aaPredicted RBP4.52□□□□□ -1.69
RC3H1-201ENST00000258349 ARRB1P49407 418 aaPredicted RBP4.52□□□□□ -1.69
RC3H1-201ENST00000258349 DEFA6Q01524 100 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 ECH1Q13011 328 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 CEACAM7Q14002 265 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 MSMO1Q15800 293 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 PRAMEF8Q5VWM4 474 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 PRAMEF7Q5VXH5 474 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 MYLIPQ8WY64 445 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 TAAR8Q969N4 342 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 C3orf49Q96BT1 292 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 RBMXL1Q96E39 390 aaKnown RBP4.52□□□□□ -1.69
RC3H1-201ENST00000258349 TP53TG5Q9Y2B4 290 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 TSPAN11A1L157 253 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 ATP6V1G2-DDX39BF2Z307 99 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 ADAM10O14672 748 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 APLNRP35414 380 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 DUSP3P51452 185 aaPredicted RBP4.52□□□□□ -1.69
RC3H1-201ENST00000258349 LCTLQ6UWM7 567 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 VASH1Q7L8A9 365 aaPredicted RBP4.52□□□□□ -1.69
RC3H1-201ENST00000258349 PLXDC1Q8IUK5 500 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 OR4K5Q8NGD3 323 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 ZFP90Q8TF47 636 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 NRG4Q8WWG1 115 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 MSLNLQ96KJ4 702 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 DPH7Q9BTV6 452 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 SMG9Q9H0W8 520 aaKnown RBP4.52□□□□□ -1.69
RC3H1-201ENST00000258349 POT1Q9NUX5 634 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 AK6Q9Y3D8 172 aaKnown RBP4.52□□□□□ -1.69
RC3H1-201ENST00000258349 STRCP1A6NGW2 1772 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 TRAV18A0A075B6X5 111 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 C2orf72A6NCS6 295 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 IGLON5A6NGN9 336 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 TK1P04183 234 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 LCKP06239 509 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 SERPINE2P07093 398 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms