RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 GIMAP5Q96F15 307 aa10.71□□□□□ -0.69
TROAP-201ENST00000257909 SLC38A3Q99624 504 aa10.71□□□□□ -0.69
TROAP-201ENST00000257909 SEC22CQ9BRL7 303 aa10.71□□□□□ -0.69
TROAP-201ENST00000257909 SAV1Q9H4B6 383 aaPredicted RBP10.71□□□□□ -0.69
TROAP-201ENST00000257909 NOX3Q9HBY0 568 aa10.71□□□□□ -0.69
TROAP-201ENST00000257909 KRCC1Q9NPI7 259 aaPredicted RBP10.71□□□□□ -0.69
TROAP-201ENST00000257909 NFKBIL1Q9UBC1 381 aaPredicted RBP10.71□□□□□ -0.69
TROAP-201ENST00000257909 HS3ST2Q9Y278 367 aa10.71□□□□□ -0.69
TROAP-201ENST00000257909 MTCL1Q9Y4B5 1905 aaKnown RBP10.71□□□□□ -0.7
TROAP-201ENST00000257909 CASP8AP2Q9UKL3 1982 aa10.71□□□□□ -0.7
TROAP-201ENST00000257909 ANKRD61A6NGH8 418 aa10.71□□□□□ -0.7
TROAP-201ENST00000257909 E9PI62 339 aa10.71□□□□□ -0.7
TROAP-201ENST00000257909 GABARAPH6UMI1 98 aa10.71□□□□□ -0.7
TROAP-201ENST00000257909 RFXAPO00287 272 aa10.71□□□□□ -0.7
TROAP-201ENST00000257909 RTCAO00442 366 aaKnown RBP10.71□□□□□ -0.7
TROAP-201ENST00000257909 REM1O75628 298 aa10.71□□□□□ -0.7
TROAP-201ENST00000257909 ARL6IP5O75915 188 aa10.71□□□□□ -0.7
TROAP-201ENST00000257909 AQP8O94778 261 aa10.71□□□□□ -0.7
TROAP-201ENST00000257909 PLATP00750 562 aa10.71□□□□□ -0.7
TROAP-201ENST00000257909 ATP1B1P05026 303 aa10.71□□□□□ -0.7
TROAP-201ENST00000257909 CTGFP29279 349 aa10.71□□□□□ -0.7
TROAP-201ENST00000257909 PBLDP30039 288 aaPredicted RBP10.71□□□□□ -0.7
TROAP-201ENST00000257909 RAD52P43351 418 aa10.71□□□□□ -0.7
TROAP-201ENST00000257909 GPR4P46093 362 aa10.71□□□□□ -0.7
TROAP-201ENST00000257909 E2F1Q01094 437 aa10.71□□□□□ -0.7
TROAP-201ENST00000257909 SCRN3Q0VDG4 424 aa10.71□□□□□ -0.7
TROAP-201ENST00000257909 OR5M10Q6IEU7 315 aa10.71□□□□□ -0.7
TROAP-201ENST00000257909 LINGO2Q7L985 606 aa10.71□□□□□ -0.7
TROAP-201ENST00000257909 OLIG3Q7RTU3 272 aa10.71□□□□□ -0.7
TROAP-201ENST00000257909 ZNF689Q96CS4 500 aaPredicted RBP10.71□□□□□ -0.7
TROAP-201ENST00000257909 MRPS24Q96EL2 167 aaKnown RBP10.71□□□□□ -0.7
TROAP-201ENST00000257909 PGLYRP3Q96LB9 341 aa10.71□□□□□ -0.7
TROAP-201ENST00000257909 HCSTQ9UBK5 93 aa10.71□□□□□ -0.7
TROAP-201ENST00000257909 GPR160Q9UJ42 338 aa10.71□□□□□ -0.7
TROAP-201ENST00000257909 ARPC4-TTLL3A0A0A6YYG9 625 aa10.7□□□□□ -0.7
TROAP-201ENST00000257909 ARPC5O15511 151 aa10.7□□□□□ -0.7
TROAP-201ENST00000257909 MAPK3P27361 379 aaPredicted RBP10.7□□□□□ -0.7
TROAP-201ENST00000257909 OR1D2P34982 312 aa10.7□□□□□ -0.7
TROAP-201ENST00000257909 CTSOP43234 321 aaPredicted RBP10.7□□□□□ -0.7
TROAP-201ENST00000257909 MECP2P51608 486 aaKnown RBP10.7□□□□□ -0.7
TROAP-201ENST00000257909 KRT33BQ14525 404 aa10.7□□□□□ -0.7
TROAP-201ENST00000257909 GRM7Q14831 915 aa10.7□□□□□ -0.7
TROAP-201ENST00000257909 UBXN2BQ14CS0 331 aa10.7□□□□□ -0.7
TROAP-201ENST00000257909 KCNA10Q16322 511 aa10.7□□□□□ -0.7
TROAP-201ENST00000257909 PABPC1L2AQ5JQF8 200 aa10.7□□□□□ -0.7
TROAP-201ENST00000257909 PRAMEF14Q5SWL7 426 aa10.7□□□□□ -0.7
TROAP-201ENST00000257909 PRPF38BQ5VTL8 546 aaKnown RBP10.7□□□□□ -0.7
TROAP-201ENST00000257909 PRAMEF13Q5VWM6 474 aa10.7□□□□□ -0.7
TROAP-201ENST00000257909 DMKNQ6E0U4 476 aaPredicted RBP10.7□□□□□ -0.7
TROAP-201ENST00000257909 GDPD4Q6W3E5 623 aa10.7□□□□□ -0.7
TROAP-201ENST00000257909 ESPNLQ6ZVH7 1005 aa10.7□□□□□ -0.7
TROAP-201ENST00000257909 MBOAT2Q6ZWT7 520 aa10.7□□□□□ -0.7
TROAP-201ENST00000257909 TAS1R1Q7RTX1 841 aa10.7□□□□□ -0.7
TROAP-201ENST00000257909 DGLUCYQ7Z3D6 616 aa10.7□□□□□ -0.7
TROAP-201ENST00000257909 FAM129CQ86XR2 697 aa10.7□□□□□ -0.7
TROAP-201ENST00000257909 CDH26Q8IXH8 852 aa10.7□□□□□ -0.7
TROAP-201ENST00000257909 NRMQ8IXM6 262 aa10.7□□□□□ -0.7
TROAP-201ENST00000257909 ZNF671Q8TAW3 534 aa10.7□□□□□ -0.7
TROAP-201ENST00000257909 ST8SIA2Q92186 375 aa10.7□□□□□ -0.7
TROAP-201ENST00000257909 PIGKQ92643 395 aa10.7□□□□□ -0.7
TROAP-201ENST00000257909 GLYATL1Q969I3 302 aa10.7□□□□□ -0.7
TROAP-201ENST00000257909 SAMD8Q96LT4 415 aa10.7□□□□□ -0.7
TROAP-201ENST00000257909 UTP23Q9BRU9 249 aaKnown RBP10.7□□□□□ -0.7
TROAP-201ENST00000257909 MS4A8Q9BY19 250 aa10.7□□□□□ -0.7
TROAP-201ENST00000257909 ARL6Q9H0F7 186 aa10.7□□□□□ -0.7
TROAP-201ENST00000257909 RHBGQ9H310 441 aa10.7□□□□□ -0.7
TROAP-201ENST00000257909 UBQLN3Q9H347 655 aa10.7□□□□□ -0.7
TROAP-201ENST00000257909 KLHL9Q9P2J3 617 aa10.7□□□□□ -0.7
TROAP-201ENST00000257909 CLEC4EQ9ULY5 219 aa10.7□□□□□ -0.7
TROAP-201ENST00000257909 TMEM88BA6NKF7 163 aa10.69□□□□□ -0.7
TROAP-201ENST00000257909 SLC22A31A6NKX4 558 aa10.69□□□□□ -0.7
TROAP-201ENST00000257909 OR5K4A6NMS3 321 aa10.69□□□□□ -0.7
TROAP-201ENST00000257909 SIGLEC6O43699 453 aa10.69□□□□□ -0.7
TROAP-201ENST00000257909 CTSAP10619 480 aa10.69□□□□□ -0.7
TROAP-201ENST00000257909 FUT5Q11128 374 aa10.69□□□□□ -0.7
TROAP-201ENST00000257909 MTFR2Q6P444 385 aa10.69□□□□□ -0.7
TROAP-201ENST00000257909 ATRAIDQ6UW56 229 aa10.69□□□□□ -0.7
TROAP-201ENST00000257909 LCTLQ6UWM7 567 aa10.69□□□□□ -0.7
TROAP-201ENST00000257909 APOOLQ6UXV4 268 aa10.69□□□□□ -0.7
TROAP-201ENST00000257909 NUDT13Q86X67 352 aa10.69□□□□□ -0.7
TROAP-201ENST00000257909 NKAIN4Q8IVV8 208 aa10.69□□□□□ -0.7
TROAP-201ENST00000257909 LMNTD1Q8N9Z9 388 aa10.69□□□□□ -0.7
TROAP-201ENST00000257909 C17orf47Q8NEP4 570 aa10.69□□□□□ -0.7
TROAP-201ENST00000257909 PNPLA2Q96AD5 504 aa10.69□□□□□ -0.7
TROAP-201ENST00000257909 C4orf36Q96KX1 117 aa10.69□□□□□ -0.7
TROAP-201ENST00000257909 F2RL3Q96RI0 385 aa10.69□□□□□ -0.7
TROAP-201ENST00000257909 DNTTIP1Q9H147 329 aa10.69□□□□□ -0.7
TROAP-201ENST00000257909 GLIPR2Q9H4G4 154 aa10.69□□□□□ -0.7
TROAP-201ENST00000257909 EVA1AQ9H8M9 152 aa10.69□□□□□ -0.7
TROAP-201ENST00000257909 KLHL28Q9NXS3 571 aa10.69□□□□□ -0.7
TROAP-201ENST00000257909 MRPL15Q9P015 296 aaKnown RBP10.69□□□□□ -0.7
TROAP-201ENST00000257909 IL20RAQ9UHF4 553 aa10.69□□□□□ -0.7
TROAP-201ENST00000257909 LSM7Q9UK45 103 aaKnown RBP10.69□□□□□ -0.7
TROAP-201ENST00000257909 KCNK7Q9Y2U2 307 aa10.69□□□□□ -0.7
TROAP-201ENST00000257909 PCDHGA9Q9Y5G4 932 aaKnown RBP10.69□□□□□ -0.7
TROAP-201ENST00000257909 A0A0B4J203 849 aa10.69□□□□□ -0.7
TROAP-201ENST00000257909 J3QLW9 94 aa10.69□□□□□ -0.7
TROAP-201ENST00000257909 ZNF254O75437 659 aa10.69□□□□□ -0.7
TROAP-201ENST00000257909 KRT33AO76009 404 aa10.69□□□□□ -0.7
TROAP-201ENST00000257909 TBX6O95947 436 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms