RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 AGBL4Q5VU57 503 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 FRRS1Q6ZNA5 592 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 OR8K3Q8NH51 312 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 TMEM239Q8WW34 195 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 SMARCD2Q92925 531 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 COX14Q96I36 57 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 KCNN2Q9H2S1 579 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 TRIM36Q9NQ86 728 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 GTF2A1LQ9UNN4 478 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 CDH10Q9Y6N8 788 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 OR6C74A6NCV1 312 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 RIIAD1A6NNX1 92 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 HMGN1P05114 100 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 ENDOUP21128 410 aaKnown RBP12.55□□□□□ -0.4
VHL-201ENST00000256474 PEBP1P30086 187 aaKnown RBP12.55□□□□□ -0.4
VHL-201ENST00000256474 RPS5P46782 204 aaKnown RBP12.55□□□□□ -0.4
VHL-201ENST00000256474 PGDP52209 483 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 GNG2P59768 71 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 CRYZQ08257 329 aaKnown RBP12.55□□□□□ -0.4
VHL-201ENST00000256474 OR1Q1Q15612 314 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 TMEM52BQ4KMG9 183 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 AADACL4Q5VUY2 407 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 MFSD12Q6NUT3 480 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 ADAMTSL4Q6UY14 1074 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 ZNF765Q7L2R6 523 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 KIAA0907Q7Z7F0 614 aaPredicted RBP12.55□□□□□ -0.4
VHL-201ENST00000256474 TTLQ8NG68 377 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 ERMAPQ96PL5 475 aaPredicted RBP12.55□□□□□ -0.4
VHL-201ENST00000256474 TNFRSF13CQ96RJ3 184 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 PDCD1LG2Q9BQ51 273 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 TMEM43Q9BTV4 400 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 NDC1Q9BTX1 674 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 MENTQ9BUN1 341 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 GNG8Q9UK08 70 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 IRGMA1A4Y4 181 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 IMPA2O14732 288 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 SCO1O75880 301 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 GNRH1P01148 92 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 CEACAM5P06731 702 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 AGFG1P52594 562 aaKnown RBP12.55□□□□□ -0.4
VHL-201ENST00000256474 RPL6Q02878 288 aaKnown RBP12.55□□□□□ -0.4
VHL-201ENST00000256474 RUNX3Q13761 415 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 SUZ12Q15022 739 aaKnown RBP12.55□□□□□ -0.4
VHL-201ENST00000256474 TMEM35AQ53FP2 167 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 ZAR1Q86SH2 424 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 ASPGQ86U10 573 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 LINC00471Q8N535 108 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 OR4D9Q8NGE8 314 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 SNX33Q8WV41 574 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 AKAP1Q92667 903 aaKnown RBP eCLIP12.55□□□□□ -0.44e-19■■■■■ 28.9
VHL-201ENST00000256474 BPIFA2Q96DR5 249 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 OMA1Q96E52 524 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 DHRS1Q96LJ7 313 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 CCDC3Q9BQI4 270 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 FGF20Q9NP95 211 aaPredicted RBP12.55□□□□□ -0.4
VHL-201ENST00000256474 MAFFQ9ULX9 164 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 MGAT4AQ9UM21 535 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 CDHR4A6H8M9 788 aa12.54□□□□□ -0.4
VHL-201ENST00000256474 ERVH48-1M5A8F1 160 aa12.54□□□□□ -0.4
VHL-201ENST00000256474 RNGTTO60942 597 aaKnown RBP12.54□□□□□ -0.4
VHL-201ENST00000256474 ACSL1P33121 698 aa12.54□□□□□ -0.4
VHL-201ENST00000256474 BMP8BP34820 402 aa12.54□□□□□ -0.4
VHL-201ENST00000256474 SOX2P48431 317 aa12.54□□□□□ -0.4
VHL-201ENST00000256474 MNX1P50219 401 aaPredicted RBP12.54□□□□□ -0.4
VHL-201ENST00000256474 GAS1P54826 345 aa12.54□□□□□ -0.4
VHL-201ENST00000256474 HES5Q5TA89 166 aa12.54□□□□□ -0.4
VHL-201ENST00000256474 MBOAT2Q6ZWT7 520 aa12.54□□□□□ -0.4
VHL-201ENST00000256474 BMP8AQ7Z5Y6 402 aa12.54□□□□□ -0.4
VHL-201ENST00000256474 TOMM5Q8N4H5 51 aa12.54□□□□□ -0.4
VHL-201ENST00000256474 SLC44A3Q8N4M1 653 aa12.54□□□□□ -0.4
VHL-201ENST00000256474 OR5J2Q8NH18 312 aa12.54□□□□□ -0.4
VHL-201ENST00000256474 ZNF431Q8TF32 576 aaPredicted RBP12.54□□□□□ -0.4
VHL-201ENST00000256474 NKX3-1Q99801 234 aaPredicted RBP12.54□□□□□ -0.4
VHL-201ENST00000256474 FAM83CQ9BQN1 747 aa12.54□□□□□ -0.4
VHL-201ENST00000256474 FUZQ9BT04 418 aa12.54□□□□□ -0.4
VHL-201ENST00000256474 TMEM168Q9H0V1 697 aa12.54□□□□□ -0.4
VHL-201ENST00000256474 STMN3Q9NZ72 180 aa12.54□□□□□ -0.4
VHL-201ENST00000256474 ZNF346Q9UL40 294 aaKnown RBP12.54□□□□□ -0.4
VHL-201ENST00000256474 SMAD9O15198 467 aaKnown RBP12.54□□□□□ -0.4
VHL-201ENST00000256474 P2RX6O15547 441 aa12.54□□□□□ -0.4
VHL-201ENST00000256474 STAT5AP42229 794 aa12.54□□□□□ -0.4
VHL-201ENST00000256474 RRAS2P62070 204 aaPredicted RBP12.54□□□□□ -0.4
VHL-201ENST00000256474 ABATP80404 500 aa12.54□□□□□ -0.4
VHL-201ENST00000256474 TFF2Q03403 129 aa12.54□□□□□ -0.4
VHL-201ENST00000256474 ACSM3Q53FZ2 586 aa12.54□□□□□ -0.4
VHL-201ENST00000256474 FAM109BQ6ICB4 259 aaPredicted RBP12.54□□□□□ -0.4
VHL-201ENST00000256474 LINGO2Q7L985 606 aa12.54□□□□□ -0.4
VHL-201ENST00000256474 SRFBP1Q8NEF9 429 aaKnown RBP12.54□□□□□ -0.4
VHL-201ENST00000256474 GHSRQ92847 366 aa12.54□□□□□ -0.4
VHL-201ENST00000256474 HS6ST2Q96MM7 605 aa12.54□□□□□ -0.4
VHL-201ENST00000256474 ASB16Q96NS5 453 aa12.54□□□□□ -0.4
VHL-201ENST00000256474 C11orf49Q9H6J7 331 aa12.54□□□□□ -0.4
VHL-201ENST00000256474 NPAP1Q9NZP6 1156 aa12.54□□□□□ -0.4
VHL-201ENST00000256474 CALML5Q9NZT1 146 aa12.54□□□□□ -0.4
VHL-201ENST00000256474 KCMF1Q9P0J7 381 aa12.54□□□□□ -0.4
VHL-201ENST00000256474 TRANK1O15050 2925 aa12.54□□□□□ -0.4
VHL-201ENST00000256474 ZSCAN5BA6NJL1 495 aa12.54□□□□□ -0.4
VHL-201ENST00000256474 DUXAA6NLW8 204 aa12.54□□□□□ -0.4
VHL-201ENST00000256474 TEX46H3BTG2 121 aa12.54□□□□□ -0.4
VHL-201ENST00000256474 STK25O00506 426 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms