RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 PON3Q15166 354 aa20.64■□□□□ 0.89
LSM4-201ENST00000252816 CTU2Q2VPK5 515 aaKnown RBP20.64■□□□□ 0.89
LSM4-201ENST00000252816 COX20Q5RI15 118 aa20.64■□□□□ 0.89
LSM4-201ENST00000252816 AP1ARQ63HQ0 302 aa20.64■□□□□ 0.89
LSM4-201ENST00000252816 FRRS1Q6ZNA5 592 aa20.64■□□□□ 0.89
LSM4-201ENST00000252816 PNPT1Q8TCS8 783 aaKnown RBP20.64■□□□□ 0.89
LSM4-201ENST00000252816 CKAP2Q8WWK9 683 aa20.64■□□□□ 0.89
LSM4-201ENST00000252816 ZG16BQ96DA0 208 aa20.64■□□□□ 0.89
LSM4-201ENST00000252816 ADGRG7Q96K78 797 aa20.64■□□□□ 0.89
LSM4-201ENST00000252816 SAP130Q9H0E3 1048 aa20.64■□□□□ 0.89
LSM4-201ENST00000252816 MCCC2Q9HCC0 563 aa20.64■□□□□ 0.89
LSM4-201ENST00000252816 KCNN3Q9UGI6 736 aa20.64■□□□□ 0.89
LSM4-201ENST00000252816 ZNF175Q9Y473 711 aa20.64■□□□□ 0.89
LSM4-201ENST00000252816 WDR45Q9Y484 360 aa20.64■□□□□ 0.89
LSM4-201ENST00000252816 EIF1AYO14602 144 aaKnown RBP20.63■□□□□ 0.89
LSM4-201ENST00000252816 POLR3GO15318 223 aaPredicted RBP20.63■□□□□ 0.89
LSM4-201ENST00000252816 ZNF264O43296 627 aa20.63■□□□□ 0.89
LSM4-201ENST00000252816 EFNA2O43921 213 aa20.63■□□□□ 0.89
LSM4-201ENST00000252816 RPS3AP61247 264 aaKnown RBP20.63■□□□□ 0.89
LSM4-201ENST00000252816 RAC1P63000 192 aa20.63■□□□□ 0.89
LSM4-201ENST00000252816 TIGD2Q4W5G0 525 aa20.63■□□□□ 0.89
LSM4-201ENST00000252816 RFWD2Q8NHY2 731 aa20.63■□□□□ 0.89
LSM4-201ENST00000252816 VPS33AQ96AX1 596 aa20.63■□□□□ 0.89
LSM4-201ENST00000252816 ARSGQ96EG1 525 aa20.63■□□□□ 0.89
LSM4-201ENST00000252816 ACBD3Q9H3P7 528 aa20.63■□□□□ 0.89
LSM4-201ENST00000252816 POLE3Q9NRF9 147 aa20.63■□□□□ 0.89
LSM4-201ENST00000252816 STOML1Q9UBI4 398 aa20.63■□□□□ 0.89
LSM4-201ENST00000252816 MYO9AB2RTY4 2548 aa20.63■□□□□ 0.89
LSM4-201ENST00000252816 FAM234BA2RU67 622 aa20.62■□□□□ 0.89
LSM4-201ENST00000252816 ADAMDEC1O15204 470 aa20.62■□□□□ 0.89
LSM4-201ENST00000252816 EIF4E2O60573 245 aaKnown RBP20.62■□□□□ 0.89
LSM4-201ENST00000252816 BCAS1O75363 584 aaPredicted RBP20.62■□□□□ 0.89
LSM4-201ENST00000252816 SHC1P29353 583 aa20.62■□□□□ 0.89
LSM4-201ENST00000252816 EIF1P41567 113 aaKnown RBP20.62■□□□□ 0.89
LSM4-201ENST00000252816 EIF1AXP47813 144 aaKnown RBP20.62■□□□□ 0.89
LSM4-201ENST00000252816 MRPL19P49406 292 aaKnown RBP20.62■□□□□ 0.89
LSM4-201ENST00000252816 AQP5P55064 265 aa20.62■□□□□ 0.89
LSM4-201ENST00000252816 CHRNEQ04844 493 aa20.62■□□□□ 0.89
LSM4-201ENST00000252816 MYBPHQ13203 477 aa20.62■□□□□ 0.89
LSM4-201ENST00000252816 SKP2Q13309 424 aa20.62■□□□□ 0.89
LSM4-201ENST00000252816 SYPL1Q16563 259 aa20.62■□□□□ 0.89
LSM4-201ENST00000252816 GTDC1Q4AE62 458 aa20.62■□□□□ 0.89
LSM4-201ENST00000252816 GPAT3Q53EU6 434 aa20.62■□□□□ 0.89
LSM4-201ENST00000252816 HMGN2P46Q86SG4 172 aa20.62■□□□□ 0.89
LSM4-201ENST00000252816 ZNF619Q8N2I2 560 aa20.62■□□□□ 0.89
LSM4-201ENST00000252816 TMCO5AQ8N6Q1 288 aa20.62■□□□□ 0.89
LSM4-201ENST00000252816 ANKFN1Q8N957 763 aa20.62■□□□□ 0.89
LSM4-201ENST00000252816 OR5W2Q8NH69 310 aa20.62■□□□□ 0.89
LSM4-201ENST00000252816 OR10D3Q8NH80 312 aa20.62■□□□□ 0.89
LSM4-201ENST00000252816 FBXO27Q8NI29 283 aa20.62■□□□□ 0.89
LSM4-201ENST00000252816 ZFP90Q8TF47 636 aa20.62■□□□□ 0.89
LSM4-201ENST00000252816 LRRC46Q96FV0 321 aa20.62■□□□□ 0.89
LSM4-201ENST00000252816 MAGEB18Q96M61 343 aa20.62■□□□□ 0.89
LSM4-201ENST00000252816 ZNF559Q9BR84 538 aa20.62■□□□□ 0.89
LSM4-201ENST00000252816 CCDC28BQ9BUN5 200 aa20.62■□□□□ 0.89
LSM4-201ENST00000252816 LAT2Q9GZY6 243 aa20.62■□□□□ 0.89
LSM4-201ENST00000252816 RNF122Q9H9V4 155 aa20.62■□□□□ 0.89
LSM4-201ENST00000252816 A0A0J9YW62 118 aa20.61■□□□□ 0.89
LSM4-201ENST00000252816 TNFSF11O14788 317 aa20.61■□□□□ 0.89
LSM4-201ENST00000252816 AQP8O94778 261 aa20.61■□□□□ 0.89
LSM4-201ENST00000252816 H6PDO95479 791 aa20.61■□□□□ 0.89
LSM4-201ENST00000252816 NTN1O95631 604 aa20.61■□□□□ 0.89
LSM4-201ENST00000252816 PRKCAP17252 672 aa20.61■□□□□ 0.89
LSM4-201ENST00000252816 KIR2DL2P43627 348 aaPredicted RBP20.61■□□□□ 0.89
LSM4-201ENST00000252816 KIR2DL3P43628 341 aa20.61■□□□□ 0.89
LSM4-201ENST00000252816 SLC6A8P48029 635 aa20.61■□□□□ 0.89
LSM4-201ENST00000252816 CCR4P51679 360 aa20.61■□□□□ 0.89
LSM4-201ENST00000252816 MVDP53602 400 aa20.61■□□□□ 0.89
LSM4-201ENST00000252816 FGFBP1Q14512 234 aa20.61■□□□□ 0.89
LSM4-201ENST00000252816 SGCBQ16585 318 aa20.61■□□□□ 0.89
LSM4-201ENST00000252816 OR2A2Q6IF42 318 aa20.61■□□□□ 0.89
LSM4-201ENST00000252816 VWA1Q6PCB0 445 aa20.61■□□□□ 0.89
LSM4-201ENST00000252816 MSANTD1Q6ZTZ1 278 aa20.61■□□□□ 0.89
LSM4-201ENST00000252816 LUZP2Q86TE4 346 aa20.61■□□□□ 0.89
LSM4-201ENST00000252816 LILRA2Q8N149 483 aa20.61■□□□□ 0.89
LSM4-201ENST00000252816 STARD4Q96DR4 205 aa20.61■□□□□ 0.89
LSM4-201ENST00000252816 ITCHQ96J02 903 aa20.61■□□□□ 0.89
LSM4-201ENST00000252816 QRSL1Q9H0R6 528 aaKnown RBP20.61■□□□□ 0.89
LSM4-201ENST00000252816 SLC24A3Q9HC58 644 aa20.61■□□□□ 0.89
LSM4-201ENST00000252816 CRIM1Q9NZV1 1036 aa20.61■□□□□ 0.89
LSM4-201ENST00000252816 FOXD3Q9UJU5 478 aaPredicted RBP20.61■□□□□ 0.89
LSM4-201ENST00000252816 GPC6Q9Y625 555 aaPredicted RBP20.61■□□□□ 0.89
LSM4-201ENST00000252816 HEATR5AQ86XA9 2040 aa20.61■□□□□ 0.89
LSM4-201ENST00000252816 DNAJA2O60884 412 aa20.6■□□□□ 0.89
LSM4-201ENST00000252816 CYP7B1O75881 506 aa20.6■□□□□ 0.89
LSM4-201ENST00000252816 KRT75O95678 551 aa20.6■□□□□ 0.89
LSM4-201ENST00000252816 CSTAP01040 98 aa20.6■□□□□ 0.89
LSM4-201ENST00000252816 CRHP06850 196 aa20.6■□□□□ 0.89
LSM4-201ENST00000252816 CHRM4P08173 479 aa20.6■□□□□ 0.89
LSM4-201ENST00000252816 UBTFL6P0CB48 400 aaPredicted RBP20.6■□□□□ 0.89
LSM4-201ENST00000252816 ZCCHC18P0CG32 403 aa20.6■□□□□ 0.89
LSM4-201ENST00000252816 ME2P23368 584 aa20.6■□□□□ 0.89
LSM4-201ENST00000252816 ELK4P28324 431 aa20.6■□□□□ 0.89
LSM4-201ENST00000252816 ADH6P28332 368 aa20.6■□□□□ 0.89
LSM4-201ENST00000252816 SFTPDP35247 375 aa20.6■□□□□ 0.89
LSM4-201ENST00000252816 PGM1P36871 562 aa20.6■□□□□ 0.89
LSM4-201ENST00000252816 TXNL4AP83876 142 aaKnown RBP20.6■□□□□ 0.89
LSM4-201ENST00000252816 QPRTQ15274 297 aa20.6■□□□□ 0.89
LSM4-201ENST00000252816 ESPNLQ6ZVH7 1005 aa20.6■□□□□ 0.89
LSM4-201ENST00000252816 EIF3MQ7L2H7 374 aaKnown RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms