RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 FANK1Q8TC84 345 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 SECISBP2Q96T21 854 aaKnown RBP14.6□□□□□ -0.07
LRFN1-201ENST00000248668 HCAR1Q9BXC0 346 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 HDHD5Q9BXW7 423 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 IL20Q9NYY1 176 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 H2AFY2Q9P0M6 372 aaPredicted RBP14.6□□□□□ -0.07
LRFN1-201ENST00000248668 MTCH2Q9Y6C9 303 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 CFAP54Q96N23 3096 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 UBL4AP11441 157 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 STAT5AP42229 794 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 CASP3P42574 277 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 EMDP50402 254 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 PLAURQ03405 335 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 RAB40BQ12829 278 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 STX4Q12846 297 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 EIPR1Q53HC9 387 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 MCATQ8IVS2 390 aaKnown RBP14.6□□□□□ -0.07
LRFN1-201ENST00000248668 GHDCQ8N2G8 530 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 CELF2-AS1Q8N7Q2 184 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 CYB561A3Q8NBI2 242 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 TMEM239Q8WW34 195 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 TTTY10Q9BZA0 68 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 HYKKA2RU49 373 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 CDHR4A6H8M9 788 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 PLOD3O60568 738 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 DBIP07108 87 aaKnown RBP14.6□□□□□ -0.07
LRFN1-201ENST00000248668 MRPL3P09001 348 aaKnown RBP14.6□□□□□ -0.07
LRFN1-201ENST00000248668 CELP19835 753 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 MAOAP21397 527 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 RPS7P62081 194 aaKnown RBP14.6□□□□□ -0.07
LRFN1-201ENST00000248668 ZNF267Q14586 743 aaPredicted RBP14.6□□□□□ -0.07
LRFN1-201ENST00000248668 THSD4Q6ZMP0 1018 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 CADM2Q8N3J6 435 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 LMX1AQ8TE12 382 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 SPACA7Q96KW9 195 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 OR51V1Q9H2C8 321 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 SIDT1Q9NXL6 827 aaKnown RBP14.6□□□□□ -0.07
LRFN1-201ENST00000248668 WSB2Q9NYS7 404 aaPredicted RBP14.6□□□□□ -0.07
LRFN1-201ENST00000248668 CDH10Q9Y6N8 788 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 UNC13CQ8NB66 2214 aa14.6□□□□□ -0.07
LRFN1-201ENST00000248668 ZNF670-ZNF695F2Z2N8 137 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 DYRK3O43781 588 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 REM1O75628 298 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 RFPL3O75679 317 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 SNX4O95219 450 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 SLC1A3P43003 542 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 FXYD6P3P58550 94 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 C3orf38Q5JPI3 329 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 C19orf47Q8N9M1 422 aaKnown RBP14.59□□□□□ -0.07
LRFN1-201ENST00000248668 TSTD1Q8NFU3 115 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 TXNDC15Q96J42 360 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 SLC30A2Q9BRI3 323 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 NLGN3Q9NZ94 848 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 MAU2Q9Y6X3 613 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 UNC119BA6NIH7 251 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 SNTNA6NMZ2 147 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 DVL2O14641 736 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 GYPBP06028 91 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 RORCP51449 518 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 PRKCDQ05655 676 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 RUNX1T1Q06455 604 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 GAS6Q14393 721 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 SIRT6Q8N6T7 355 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 RBM18Q96H35 190 aaKnown RBP14.59□□□□□ -0.07
LRFN1-201ENST00000248668 IFT27Q9BW83 186 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 TIGARQ9NQ88 270 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 SOHLH2Q9NX45 425 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 POMT2Q9UKY4 750 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 RGS13O14921 159 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 NCR1O76036 304 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 IGKV1D-16P01601 117 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 CLUP10909 449 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 SLC9A3P48764 834 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 GFERP55789 205 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 DAB2P98082 770 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 ZNF45Q02386 682 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 FAM53BQ14153 422 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 TAB1Q15750 504 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 AADACL4Q5VUY2 407 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 CXXC5Q7LFL8 322 aaKnown RBP14.59□□□□□ -0.07
LRFN1-201ENST00000248668 MINDY2Q8NBR6 621 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 TGM7Q96PF1 710 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 CD180Q99467 661 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 TEX12Q9BXU0 123 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 PRRG3Q9BZD7 231 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 DUSP22Q9NRW4 184 aa14.59□□□□□ -0.07
LRFN1-201ENST00000248668 A0A1W2PPC4 97 aa14.58□□□□□ -0.08
LRFN1-201ENST00000248668 KDM4EB2RXH2 506 aaPredicted RBP14.58□□□□□ -0.08
LRFN1-201ENST00000248668 KLF4O43474 513 aa14.58□□□□□ -0.08
LRFN1-201ENST00000248668 RAB38P57729 211 aa14.58□□□□□ -0.08
LRFN1-201ENST00000248668 PSG6Q00889 435 aa14.58□□□□□ -0.08
LRFN1-201ENST00000248668 FABP5Q01469 135 aa14.58□□□□□ -0.08
LRFN1-201ENST00000248668 NKAIN2Q5VXU1 208 aa14.58□□□□□ -0.08
LRFN1-201ENST00000248668 KLBQ86Z14 1044 aa14.58□□□□□ -0.08
LRFN1-201ENST00000248668 ASCC1Q8N9N2 400 aaKnown RBP14.58□□□□□ -0.08
LRFN1-201ENST00000248668 SPRYD4Q8WW59 207 aaPredicted RBP14.58□□□□□ -0.08
LRFN1-201ENST00000248668 UFD1Q92890 307 aa14.58□□□□□ -0.08
LRFN1-201ENST00000248668 SDHCQ99643 169 aaPredicted RBP14.58□□□□□ -0.08
LRFN1-201ENST00000248668 SEMA6CQ9H3T2 930 aa14.58□□□□□ -0.08
LRFN1-201ENST00000248668 ISG20L2Q9H9L3 353 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms