RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 UMODP07911 640 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 TMED10P49755 219 aaKnown RBP13.03□□□□□ -0.32
SDF2-201ENST00000247020 CTBP2P56545 445 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 COPZ1P61923 177 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 PRKCDQ05655 676 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 SKP2Q13309 424 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 STPG1Q5TH74 334 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 LINC00114Q6XXX2 140 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 CCDC71Q8IV32 467 aaPredicted RBP13.03□□□□□ -0.32
SDF2-201ENST00000247020 MISPQ8IVT2 679 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 SLC15A4Q8N697 577 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 RHOXF1Q8NHV9 184 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 FAM81AQ8TBF8 368 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 M1APQ8TC57 530 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 ELP5Q8TE02 316 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 TMEM255BQ8WV15 326 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 TRUB1Q8WWH5 349 aaKnown RBP13.03□□□□□ -0.32
SDF2-201ENST00000247020 LRFN3Q9BTN0 628 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 NRSN2Q9GZP1 204 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 ADNPQ9H2P0 1102 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 C12orf10Q9HB07 376 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 SLC25A19Q9HC21 320 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 HHATLQ9HCP6 504 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 CCNB1IP1Q9NPC3 277 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 PLCXD1Q9NUJ7 323 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 IMPAD1Q9NX62 359 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 SCN3BQ9NY72 215 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 SELENONQ9NZV5 590 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 TPRKBQ9Y3C4 175 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 NPFFR2Q9Y5X5 522 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 CACNA1HO95180 2353 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 H3BN98 237 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 PRKNO60260 465 aaPredicted RBP13.03□□□□□ -0.32
SDF2-201ENST00000247020 IGF2P01344 180 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 LIMK1P53667 647 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 FOXL2P58012 376 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 CCDC157Q569K6 752 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 HES3Q5TGS1 186 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 BROXQ5VW32 411 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 C12orf73Q69YU5 71 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 LAIR2Q6ISS4 152 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 RPL13AP3Q6NVV1 102 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 ZNF773Q6PK81 442 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 PRICKLE2Q7Z3G6 844 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 P3H2Q8IVL5 708 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 NRMQ8IXM6 262 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 CDK20Q8IZL9 346 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 SLC43A2Q8N370 569 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 POGLUT1Q8NBL1 392 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 PHOSPHO1Q8TCT1 267 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 PRRG3Q9BZD7 231 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 FLRT3Q9NZU0 649 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 RNF6Q9Y252 685 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 MED31Q9Y3C7 131 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 HEATR5AQ86XA9 2040 aa13.02□□□□□ -0.32
SDF2-201ENST00000247020 WDFY4Q6ZS81 3184 aa13.02□□□□□ -0.33
SDF2-201ENST00000247020 SMIM31A0A1B0GVY4 71 aa13.02□□□□□ -0.33
SDF2-201ENST00000247020 CDC14CA4D256 554 aa13.02□□□□□ -0.33
SDF2-201ENST00000247020 SH3D21A4FU49 640 aa13.02□□□□□ -0.33
SDF2-201ENST00000247020 GTPBP1O00178 669 aaKnown RBP13.02□□□□□ -0.33
SDF2-201ENST00000247020 FADS1O60427 444 aa13.02□□□□□ -0.33
SDF2-201ENST00000247020 COX6A1P12074 109 aa13.02□□□□□ -0.33
SDF2-201ENST00000247020 ATP6V1B1P15313 513 aa13.02□□□□□ -0.33
SDF2-201ENST00000247020 GABRB1P18505 474 aa13.02□□□□□ -0.33
SDF2-201ENST00000247020 CDK5Q00535 292 aa13.02□□□□□ -0.33
SDF2-201ENST00000247020 FOXD4Q12950 439 aaPredicted RBP13.02□□□□□ -0.33
SDF2-201ENST00000247020 CD226Q15762 336 aa13.02□□□□□ -0.33
SDF2-201ENST00000247020 ALG10BQ5I7T1 473 aa13.02□□□□□ -0.33
SDF2-201ENST00000247020 PLAG1Q6DJT9 500 aa13.02□□□□□ -0.33
SDF2-201ENST00000247020 WBP2NLQ6ICG8 309 aa13.02□□□□□ -0.33
SDF2-201ENST00000247020 DHRS13Q6UX07 377 aa13.02□□□□□ -0.33
SDF2-201ENST00000247020 ISLR2Q6UXK2 745 aa13.02□□□□□ -0.33
SDF2-201ENST00000247020 TMPRSS11FQ6ZWK6 438 aa13.02□□□□□ -0.33
SDF2-201ENST00000247020 PRR22Q8IZ63 422 aa13.02□□□□□ -0.33
SDF2-201ENST00000247020 ESX1Q8N693 406 aa13.02□□□□□ -0.33
SDF2-201ENST00000247020 CNIH3Q8TBE1 160 aa13.02□□□□□ -0.33
SDF2-201ENST00000247020 SLC22A8Q8TCC7 542 aa13.02□□□□□ -0.33
SDF2-201ENST00000247020 RNF138Q8WVD3 245 aa13.02□□□□□ -0.33
SDF2-201ENST00000247020 IPCEF1Q8WWN9 437 aaPredicted RBP13.02□□□□□ -0.33
SDF2-201ENST00000247020 TTC9Q92623 222 aa13.02□□□□□ -0.33
SDF2-201ENST00000247020 TMCO6Q96DC7 493 aa13.02□□□□□ -0.33
SDF2-201ENST00000247020 FAM46AQ96IP4 442 aaKnown RBP13.02□□□□□ -0.33
SDF2-201ENST00000247020 IMMP1LQ96LU5 166 aa13.02□□□□□ -0.33
SDF2-201ENST00000247020 TBL1XR1Q9BZK7 514 aa13.02□□□□□ -0.33
SDF2-201ENST00000247020 SLC19A3Q9BZV2 496 aa13.02□□□□□ -0.33
SDF2-201ENST00000247020 MMP25Q9NPA2 562 aa13.02□□□□□ -0.33
SDF2-201ENST00000247020 IL20Q9NYY1 176 aa13.02□□□□□ -0.33
SDF2-201ENST00000247020 HS3ST3B1Q9Y662 390 aa13.02□□□□□ -0.33
SDF2-201ENST00000247020 FRYLO94915 3013 aa13.01□□□□□ -0.33
SDF2-201ENST00000247020 TMEM200CA6NKL6 621 aa13.01□□□□□ -0.33
SDF2-201ENST00000247020 C9orf172C9J069 976 aa13.01□□□□□ -0.33
SDF2-201ENST00000247020 ADAM11O75078 769 aa13.01□□□□□ -0.33
SDF2-201ENST00000247020 WBP4O75554 376 aaKnown RBP13.01□□□□□ -0.33
SDF2-201ENST00000247020 NADKO95544 446 aaPredicted RBP13.01□□□□□ -0.33
SDF2-201ENST00000247020 LINGO3P0C6S8 592 aa13.01□□□□□ -0.33
SDF2-201ENST00000247020 EVI2BP34910 448 aa13.01□□□□□ -0.33
SDF2-201ENST00000247020 ALDH3B2P48448 385 aa13.01□□□□□ -0.33
SDF2-201ENST00000247020 IDH2P48735 452 aaKnown RBP13.01□□□□□ -0.33
SDF2-201ENST00000247020 SMSP52788 366 aa13.01□□□□□ -0.33
SDF2-201ENST00000247020 SNRPGP62308 76 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms