RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 HS6ST2Q96MM7 605 aa17.2■□□□□ 0.34
TNFSF9-201ENST00000245817 PITX2Q99697 317 aa17.2■□□□□ 0.34
TNFSF9-201ENST00000245817 SPRY4Q9C004 299 aa17.2■□□□□ 0.34
TNFSF9-201ENST00000245817 ADNPQ9H2P0 1102 aa17.2■□□□□ 0.34
TNFSF9-201ENST00000245817 HS3ST3B1Q9Y662 390 aa17.2■□□□□ 0.34
TNFSF9-201ENST00000245817 NSG1A0A0A6YYJ2 146 aa17.19■□□□□ 0.34
TNFSF9-201ENST00000245817 A0A1W2PNU3 283 aaPredicted RBP17.19■□□□□ 0.34
TNFSF9-201ENST00000245817 A0A1W2PQD3 144 aa17.19■□□□□ 0.34
TNFSF9-201ENST00000245817 THY1P04216 161 aa17.19■□□□□ 0.34
TNFSF9-201ENST00000245817 EPHA2P29317 976 aa17.19■□□□□ 0.34
TNFSF9-201ENST00000245817 TMED10P49755 219 aaKnown RBP17.19■□□□□ 0.34
TNFSF9-201ENST00000245817 NOVA1P51513 510 aaKnown RBP17.19■□□□□ 0.34
TNFSF9-201ENST00000245817 CCR4P51679 360 aa17.19■□□□□ 0.34
TNFSF9-201ENST00000245817 ISL1P61371 349 aa17.19■□□□□ 0.34
TNFSF9-201ENST00000245817 SSPNQ14714 243 aa17.19■□□□□ 0.34
TNFSF9-201ENST00000245817 CD300LDQ6UXZ3 194 aa17.19■□□□□ 0.34
TNFSF9-201ENST00000245817 NDUFAF7Q7L592 441 aa17.19■□□□□ 0.34
TNFSF9-201ENST00000245817 PRICKLE2Q7Z3G6 844 aa17.19■□□□□ 0.34
TNFSF9-201ENST00000245817 DEPDC4Q8N2C3 294 aa17.19■□□□□ 0.34
TNFSF9-201ENST00000245817 M1APQ8TC57 530 aa17.19■□□□□ 0.34
TNFSF9-201ENST00000245817 TMEM239Q8WW34 195 aa17.19■□□□□ 0.34
TNFSF9-201ENST00000245817 EXOSC3Q9NQT5 275 aaKnown RBP17.19■□□□□ 0.34
TNFSF9-201ENST00000245817 MYOTQ9UBF9 498 aa17.19■□□□□ 0.34
TNFSF9-201ENST00000245817 KIF26BQ2KJY2 2108 aa17.18■□□□□ 0.34
TNFSF9-201ENST00000245817 A0A0B4J2E0 115 aa17.18■□□□□ 0.34
TNFSF9-201ENST00000245817 A0A1B0GWA3 101 aa17.18■□□□□ 0.34
TNFSF9-201ENST00000245817 A0A1B0GX12 115 aa17.18■□□□□ 0.34
TNFSF9-201ENST00000245817 ALG1L2C9J202 215 aa17.18■□□□□ 0.34
TNFSF9-201ENST00000245817 CHP2O43745 196 aa17.18■□□□□ 0.34
TNFSF9-201ENST00000245817 COX6A1P12074 109 aa17.18■□□□□ 0.34
TNFSF9-201ENST00000245817 NAGAP17050 411 aa17.18■□□□□ 0.34
TNFSF9-201ENST00000245817 CHMP24386 653 aa17.18■□□□□ 0.34
TNFSF9-201ENST00000245817 ELK4P28324 431 aa17.18■□□□□ 0.34
TNFSF9-201ENST00000245817 OTX2P32243 289 aa17.18■□□□□ 0.34
TNFSF9-201ENST00000245817 GGT2P36268 569 aa17.18■□□□□ 0.34
TNFSF9-201ENST00000245817 CDC42P60953 191 aa17.18■□□□□ 0.34
TNFSF9-201ENST00000245817 CD47Q08722 323 aa17.18■□□□□ 0.34
TNFSF9-201ENST00000245817 TOP3AQ13472 1001 aaPredicted RBP17.18■□□□□ 0.34
TNFSF9-201ENST00000245817 PTGES3Q15185 160 aaKnown RBP17.18■□□□□ 0.34
TNFSF9-201ENST00000245817 CD226Q15762 336 aa17.18■□□□□ 0.34
TNFSF9-201ENST00000245817 MEP1AQ16819 746 aa17.18■□□□□ 0.34
TNFSF9-201ENST00000245817 NDUFAF6Q330K2 333 aa17.18■□□□□ 0.34
TNFSF9-201ENST00000245817 KCTD21Q4G0X4 260 aa17.18■□□□□ 0.34
TNFSF9-201ENST00000245817 ALG10BQ5I7T1 473 aa17.18■□□□□ 0.34
TNFSF9-201ENST00000245817 RBM48Q5RL73 367 aaKnown RBP17.18■□□□□ 0.34
TNFSF9-201ENST00000245817 FNDC7Q5VTL7 733 aa17.18■□□□□ 0.34
TNFSF9-201ENST00000245817 PLAG1Q6DJT9 500 aa17.18■□□□□ 0.34
TNFSF9-201ENST00000245817 ULK3Q6PHR2 472 aa17.18■□□□□ 0.34
TNFSF9-201ENST00000245817 KIRREL2Q6UWL6 708 aa17.18■□□□□ 0.34
TNFSF9-201ENST00000245817 TMPRSS12Q86WS5 348 aa17.18■□□□□ 0.34
TNFSF9-201ENST00000245817 NRMQ8IXM6 262 aa17.18■□□□□ 0.34
TNFSF9-201ENST00000245817 TSPAN14Q8NG11 270 aa17.18■□□□□ 0.34
TNFSF9-201ENST00000245817 ELP5Q8TE02 316 aa17.18■□□□□ 0.34
TNFSF9-201ENST00000245817 MPP4Q96JB8 637 aa17.18■□□□□ 0.34
TNFSF9-201ENST00000245817 MRPS26Q9BYN8 205 aaKnown RBP17.18■□□□□ 0.34
TNFSF9-201ENST00000245817 B3GNT4Q9C0J1 378 aa17.18■□□□□ 0.34
TNFSF9-201ENST00000245817 LAT2Q9GZY6 243 aa17.18■□□□□ 0.34
TNFSF9-201ENST00000245817 BLOC1S6Q9UL45 172 aa17.18■□□□□ 0.34
TNFSF9-201ENST00000245817 CARD8Q9Y2G2 431 aa17.18■□□□□ 0.34
TNFSF9-201ENST00000245817 DKK1O94907 266 aa17.17■□□□□ 0.34
TNFSF9-201ENST00000245817 EVI2BP34910 448 aa17.17■□□□□ 0.34
TNFSF9-201ENST00000245817 SLC6A8P48029 635 aa17.17■□□□□ 0.34
TNFSF9-201ENST00000245817 GSSP48637 474 aa17.17■□□□□ 0.34
TNFSF9-201ENST00000245817 IDH2P48735 452 aaKnown RBP17.17■□□□□ 0.34
TNFSF9-201ENST00000245817 TSPAN31Q12999 210 aa17.17■□□□□ 0.34
TNFSF9-201ENST00000245817 C6orf141Q5SZD1 244 aa17.17■□□□□ 0.34
TNFSF9-201ENST00000245817 APOOLQ6UXV4 268 aa17.17■□□□□ 0.34
TNFSF9-201ENST00000245817 C16orf47Q6ZP98 133 aaPredicted RBP17.17■□□□□ 0.34
TNFSF9-201ENST00000245817 MARCH3Q86UD3 253 aa17.17■□□□□ 0.34
TNFSF9-201ENST00000245817 CACTIN-AS1Q8N1I8 211 aa17.17■□□□□ 0.34
TNFSF9-201ENST00000245817 AMER2Q8N7J2 671 aa17.17■□□□□ 0.34
TNFSF9-201ENST00000245817 FAM71CQ8NEG0 241 aa17.17■□□□□ 0.34
TNFSF9-201ENST00000245817 OR11G2Q8NGC1 345 aa17.17■□□□□ 0.34
TNFSF9-201ENST00000245817 OR5M3Q8NGP4 307 aa17.17■□□□□ 0.34
TNFSF9-201ENST00000245817 FAM81AQ8TBF8 368 aa17.17■□□□□ 0.34
TNFSF9-201ENST00000245817 DNAJA4Q8WW22 397 aaPredicted RBP17.17■□□□□ 0.34
TNFSF9-201ENST00000245817 HDAC2Q92769 488 aaKnown RBP17.17■□□□□ 0.34
TNFSF9-201ENST00000245817 FAM46AQ96IP4 442 aaKnown RBP17.17■□□□□ 0.34
TNFSF9-201ENST00000245817 GPR87Q9BY21 358 aa17.17■□□□□ 0.34
TNFSF9-201ENST00000245817 IMPAD1Q9NX62 359 aa17.17■□□□□ 0.34
TNFSF9-201ENST00000245817 REV1Q9UBZ9 1251 aa17.17■□□□□ 0.34
TNFSF9-201ENST00000245817 MED31Q9Y3C7 131 aa17.17■□□□□ 0.34
TNFSF9-201ENST00000245817 C21orf140B9A014 251 aa17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 HCRTR2O43614 444 aa17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 EIF4E2O60573 245 aaKnown RBP17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 SMNDC1O75940 238 aaKnown RBP eCLIP17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 SOX14O95416 240 aa17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 CLPTM1O96005 669 aa17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 ICAM2P13598 275 aa17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 EEF1B2P24534 225 aaKnown RBP17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 OMPP47874 163 aa17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 RPS18P62269 152 aaKnown RBP17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 LSM11P83369 360 aaKnown RBP eCLIP17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 SKP2Q13309 424 aa17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 DESI1Q6ICB0 168 aa17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 Q6ZPB1 254 aaPredicted RBP17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 MISPQ8IVT2 679 aa17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 ZNF563Q8TA94 476 aa17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 ARSGQ96EG1 525 aa17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 IMMP1LQ96LU5 166 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms