RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 MAB21L1Q13394 359 aa17.37■□□□□ 0.37
CPSF3-201ENST00000238112 TNK1Q13470 666 aa17.37■□□□□ 0.37
CPSF3-201ENST00000238112 TRAM1Q15629 374 aa17.37■□□□□ 0.37
CPSF3-201ENST00000238112 FBXO42Q6P3S6 717 aa17.37■□□□□ 0.37
CPSF3-201ENST00000238112 ASB18Q6ZVZ8 466 aa17.37■□□□□ 0.37
CPSF3-201ENST00000238112 BMP8AQ7Z5Y6 402 aa17.37■□□□□ 0.37
CPSF3-201ENST00000238112 OR4M1Q8NGD0 313 aa17.37■□□□□ 0.37
CPSF3-201ENST00000238112 OR13C2Q8NGS9 318 aa17.37■□□□□ 0.37
CPSF3-201ENST00000238112 BPIFA2Q96DR5 249 aa17.37■□□□□ 0.37
CPSF3-201ENST00000238112 THAP7Q9BT49 309 aaPredicted RBP17.37■□□□□ 0.37
CPSF3-201ENST00000238112 SFXN1Q9H9B4 322 aa17.37■□□□□ 0.37
CPSF3-201ENST00000238112 RASD1Q9Y272 281 aa17.37■□□□□ 0.37
CPSF3-201ENST00000238112 TMEM5Q9Y2B1 443 aa17.37■□□□□ 0.37
CPSF3-201ENST00000238112 NPIPA5A0A0B4J1W7 369 aa17.36■□□□□ 0.37
CPSF3-201ENST00000238112 LRRC72A6NJI9 287 aa17.36■□□□□ 0.37
CPSF3-201ENST00000238112 RIIAD1A6NNX1 92 aa17.36■□□□□ 0.37
CPSF3-201ENST00000238112 NPIPA7E9PJI5 369 aa17.36■□□□□ 0.37
CPSF3-201ENST00000238112 PEX12O00623 359 aa17.36■□□□□ 0.37
CPSF3-201ENST00000238112 P2RX6O15547 441 aa17.36■□□□□ 0.37
CPSF3-201ENST00000238112 EIF4EP06730 217 aaKnown RBP17.36■□□□□ 0.37
CPSF3-201ENST00000238112 NPIPA8P0DM63 369 aa17.36■□□□□ 0.37
CPSF3-201ENST00000238112 ZNF10P21506 573 aaPredicted RBP17.36■□□□□ 0.37
CPSF3-201ENST00000238112 RPS4Y1P22090 263 aaKnown RBP17.36■□□□□ 0.37
CPSF3-201ENST00000238112 TAS2R43P59537 309 aa17.36■□□□□ 0.37
CPSF3-201ENST00000238112 GALK2Q01415 458 aa17.36■□□□□ 0.37
CPSF3-201ENST00000238112 SLC3A1Q07837 685 aa17.36■□□□□ 0.37
CPSF3-201ENST00000238112 GPR176Q14439 515 aa17.36■□□□□ 0.37
CPSF3-201ENST00000238112 SFXN4Q6P4A7 337 aa17.36■□□□□ 0.37
CPSF3-201ENST00000238112 SCARF2Q96GP6 870 aaPredicted RBP17.36■□□□□ 0.37
CPSF3-201ENST00000238112 TEAD3Q99594 435 aa17.36■□□□□ 0.37
CPSF3-201ENST00000238112 PPIL3Q9H2H8 161 aaKnown RBP17.36■□□□□ 0.37
CPSF3-201ENST00000238112 SLC28A3Q9HAS3 691 aa17.36■□□□□ 0.37
CPSF3-201ENST00000238112 GALNT9Q9HCQ5 603 aa17.36■□□□□ 0.37
CPSF3-201ENST00000238112 MED31Q9Y3C7 131 aa17.36■□□□□ 0.37
CPSF3-201ENST00000238112 CDHR4A6H8M9 788 aa17.36■□□□□ 0.37
CPSF3-201ENST00000238112 SYNDIG1LA6NDD5 238 aa17.36■□□□□ 0.37
CPSF3-201ENST00000238112 PLPP2O43688 288 aa17.36■□□□□ 0.37
CPSF3-201ENST00000238112 DNAJB6O75190 326 aa17.36■□□□□ 0.37
CPSF3-201ENST00000238112 PRKCAP17252 672 aa17.36■□□□□ 0.37
CPSF3-201ENST00000238112 AK4P27144 223 aaPredicted RBP17.36■□□□□ 0.37
CPSF3-201ENST00000238112 PITPNBP48739 271 aa17.36■□□□□ 0.37
CPSF3-201ENST00000238112 DBPQ10586 325 aaPredicted RBP17.36■□□□□ 0.37
CPSF3-201ENST00000238112 FAM27D1Q5T7N8 215 aa17.36■□□□□ 0.37
CPSF3-201ENST00000238112 GARNL3Q5VVW2 1013 aa17.36■□□□□ 0.37
CPSF3-201ENST00000238112 THSD4Q6ZMP0 1018 aa17.36■□□□□ 0.37
CPSF3-201ENST00000238112 RD3Q7Z3Z2 195 aa17.36■□□□□ 0.37
CPSF3-201ENST00000238112 CEACAM19Q7Z692 300 aa17.36■□□□□ 0.37
CPSF3-201ENST00000238112 TPRA1Q86W33 373 aa17.36■□□□□ 0.37
CPSF3-201ENST00000238112 DTX3Q8N9I9 347 aa17.36■□□□□ 0.37
CPSF3-201ENST00000238112 PHOSPHO2Q8TCD6 241 aa17.36■□□□□ 0.37
CPSF3-201ENST00000238112 PTP4A1Q93096 173 aa17.36■□□□□ 0.37
CPSF3-201ENST00000238112 OR2A5Q96R48 311 aa17.36■□□□□ 0.37
CPSF3-201ENST00000238112 MKRN2Q9H000 416 aaKnown RBP17.36■□□□□ 0.37
CPSF3-201ENST00000238112 KLHL1Q9NR64 748 aa17.36■□□□□ 0.37
CPSF3-201ENST00000238112 SATB2Q9UPW6 733 aa17.36■□□□□ 0.37
CPSF3-201ENST00000238112 SLC22A7Q9Y694 548 aa17.36■□□□□ 0.37
CPSF3-201ENST00000238112 TRBV23OR9-2A0A075B6M9 112 aa17.35■□□□□ 0.37
CPSF3-201ENST00000238112 E9PI62 339 aa17.35■□□□□ 0.37
CPSF3-201ENST00000238112 J3QLW9 94 aa17.35■□□□□ 0.37
CPSF3-201ENST00000238112 ZNF780AO75290 641 aaPredicted RBP17.35■□□□□ 0.37
CPSF3-201ENST00000238112 SMIM10L1P0DMW3 83 aa17.35■□□□□ 0.37
CPSF3-201ENST00000238112 ZNF19P17023 458 aa17.35■□□□□ 0.37
CPSF3-201ENST00000238112 SLC6A1P30531 599 aa17.35■□□□□ 0.37
CPSF3-201ENST00000238112 RFX3P48380 749 aa17.35■□□□□ 0.37
CPSF3-201ENST00000238112 AMZ1Q400G9 498 aa17.35■□□□□ 0.37
CPSF3-201ENST00000238112 FCRLBQ6BAA4 426 aa17.35■□□□□ 0.37
CPSF3-201ENST00000238112 TMPRSS11FQ6ZWK6 438 aa17.35■□□□□ 0.37
CPSF3-201ENST00000238112 ABHD13Q7L211 337 aa17.35■□□□□ 0.37
CPSF3-201ENST00000238112 OAFQ86UD1 273 aa17.35■□□□□ 0.37
CPSF3-201ENST00000238112 CDRT4Q8N9R6 151 aa17.35■□□□□ 0.37
CPSF3-201ENST00000238112 OR4C6Q8NH72 309 aa17.35■□□□□ 0.37
CPSF3-201ENST00000238112 TM4SF19Q96DZ7 209 aa17.35■□□□□ 0.37
CPSF3-201ENST00000238112 SMIM10Q96HG1 83 aa17.35■□□□□ 0.37
CPSF3-201ENST00000238112 C4orf36Q96KX1 117 aa17.35■□□□□ 0.37
CPSF3-201ENST00000238112 GTPBP2Q9BX10 602 aaKnown RBP17.35■□□□□ 0.37
CPSF3-201ENST00000238112 FOLH1BQ9HBA9 442 aa17.35■□□□□ 0.37
CPSF3-201ENST00000238112 DUSP22Q9NRW4 184 aa17.35■□□□□ 0.37
CPSF3-201ENST00000238112 FBXO34Q9NWN3 711 aa17.35■□□□□ 0.37
CPSF3-201ENST00000238112 SIGLEC7Q9Y286 467 aa17.35■□□□□ 0.37
CPSF3-201ENST00000238112 ZNF860A6NHJ4 632 aa17.35■□□□□ 0.37
CPSF3-201ENST00000238112 PLOD3O60568 738 aa17.35■□□□□ 0.37
CPSF3-201ENST00000238112 FMO6PO60774 539 aa17.35■□□□□ 0.37
CPSF3-201ENST00000238112 LYPD3O95274 346 aa17.35■□□□□ 0.37
CPSF3-201ENST00000238112 PAHP00439 452 aa17.35■□□□□ 0.37
CPSF3-201ENST00000238112 NPR2P20594 1047 aa17.35■□□□□ 0.37
CPSF3-201ENST00000238112 NT5EP21589 574 aa17.35■□□□□ 0.37
CPSF3-201ENST00000238112 THBS2P35442 1172 aa17.35■□□□□ 0.37
CPSF3-201ENST00000238112 AGFG1P52594 562 aaKnown RBP17.35■□□□□ 0.37
CPSF3-201ENST00000238112 ADPRHP54922 357 aa17.35■□□□□ 0.37
CPSF3-201ENST00000238112 OR10A3P58181 314 aa17.35■□□□□ 0.37
CPSF3-201ENST00000238112 GNG2P59768 71 aa17.35■□□□□ 0.37
CPSF3-201ENST00000238112 SHC2P98077 582 aa17.35■□□□□ 0.37
CPSF3-201ENST00000238112 KIR2DS3Q14952 304 aa17.35■□□□□ 0.37
CPSF3-201ENST00000238112 FHL5Q5TD97 284 aa17.35■□□□□ 0.37
CPSF3-201ENST00000238112 FIGNL1Q6PIW4 674 aa17.35■□□□□ 0.37
CPSF3-201ENST00000238112 ABHD4Q8TB40 342 aa17.35■□□□□ 0.37
CPSF3-201ENST00000238112 DEDD2Q8WXF8 326 aa17.35■□□□□ 0.37
CPSF3-201ENST00000238112 TRAF4Q9BUZ4 470 aaPredicted RBP17.35■□□□□ 0.37
CPSF3-201ENST00000238112 PLA2G2FQ9BZM2 168 aa17.35■□□□□ 0.37
CPSF3-201ENST00000238112 ABCG5Q9H222 651 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms