RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 PLBD1Q6P4A8 553 aa14.95□□□□□ -0.02
UBE3D-201ENST00000237186 SMARCD3Q6STE5 483 aa14.95□□□□□ -0.02
UBE3D-201ENST00000237186 BMP8AQ7Z5Y6 402 aa14.95□□□□□ -0.02
UBE3D-201ENST00000237186 ACBD7Q8N6N7 88 aa14.95□□□□□ -0.02
UBE3D-201ENST00000237186 CNOT9Q92600 299 aaKnown RBP14.95□□□□□ -0.02
UBE3D-201ENST00000237186 TCTN2Q96GX1 697 aa14.95□□□□□ -0.02
UBE3D-201ENST00000237186 BAIAP2Q9UQB8 552 aa14.95□□□□□ -0.02
UBE3D-201ENST00000237186 POLHQ9Y253 713 aa14.95□□□□□ -0.02
UBE3D-201ENST00000237186 PCDHGB2Q9Y5G2 931 aa14.95□□□□□ -0.02
UBE3D-201ENST00000237186 FANCMQ8IYD8 2048 aa14.95□□□□□ -0.02
UBE3D-201ENST00000237186 SLC9B1P1A6NJY1 282 aa14.95□□□□□ -0.02
UBE3D-201ENST00000237186 NPIPB9F8W1W9 429 aa14.95□□□□□ -0.02
UBE3D-201ENST00000237186 SEC14L5O43304 696 aa14.95□□□□□ -0.02
UBE3D-201ENST00000237186 HCN1O60741 890 aa14.95□□□□□ -0.02
UBE3D-201ENST00000237186 PAICSP22234 425 aaKnown RBP14.95□□□□□ -0.02
UBE3D-201ENST00000237186 FOXK2Q01167 660 aa14.95□□□□□ -0.02
UBE3D-201ENST00000237186 CBX3Q13185 183 aa14.95□□□□□ -0.02
UBE3D-201ENST00000237186 DEFB110Q30KQ9 67 aa14.95□□□□□ -0.02
UBE3D-201ENST00000237186 ZNF362Q5T0B9 420 aaPredicted RBP14.95□□□□□ -0.02
UBE3D-201ENST00000237186 PDZK1Q5T2W1 519 aa14.95□□□□□ -0.02
UBE3D-201ENST00000237186 LINC00114Q6XXX2 140 aa14.95□□□□□ -0.02
UBE3D-201ENST00000237186 SIRT6Q8N6T7 355 aa14.95□□□□□ -0.02
UBE3D-201ENST00000237186 DNAJA4Q8WW22 397 aaPredicted RBP14.95□□□□□ -0.02
UBE3D-201ENST00000237186 SPRYD4Q8WW59 207 aaPredicted RBP14.95□□□□□ -0.02
UBE3D-201ENST00000237186 RIT1Q92963 219 aa14.95□□□□□ -0.02
UBE3D-201ENST00000237186 PTP4A1Q93096 173 aa14.95□□□□□ -0.02
UBE3D-201ENST00000237186 RBM18Q96H35 190 aaKnown RBP14.95□□□□□ -0.02
UBE3D-201ENST00000237186 ABCB9Q9NP78 766 aa14.95□□□□□ -0.02
UBE3D-201ENST00000237186 INPP5EQ9NRR6 644 aa14.95□□□□□ -0.02
UBE3D-201ENST00000237186 DNAJB12Q9NXW2 375 aaKnown RBP14.95□□□□□ -0.02
UBE3D-201ENST00000237186 FLRT3Q9NZU0 649 aa14.95□□□□□ -0.02
UBE3D-201ENST00000237186 TBC1D24Q9ULP9 559 aa14.95□□□□□ -0.02
UBE3D-201ENST00000237186 NDRG2Q9UN36 371 aaKnown RBP14.95□□□□□ -0.02
UBE3D-201ENST00000237186 MRPS33Q9Y291 106 aaKnown RBP14.95□□□□□ -0.02
UBE3D-201ENST00000237186 SLC35A3Q9Y2D2 325 aa14.95□□□□□ -0.02
UBE3D-201ENST00000237186 CLDN16Q9Y5I7 305 aa14.95□□□□□ -0.02
UBE3D-201ENST00000237186 A0A1B0GWA3 101 aa14.94□□□□□ -0.02
UBE3D-201ENST00000237186 A0A1W2PQL4 384 aaPredicted RBP14.94□□□□□ -0.02
UBE3D-201ENST00000237186 FAM183AA6NL82 134 aa14.94□□□□□ -0.02
UBE3D-201ENST00000237186 TGFBR3LH3BV60 316 aa14.94□□□□□ -0.02
UBE3D-201ENST00000237186 SNPHO15079 494 aa14.94□□□□□ -0.02
UBE3D-201ENST00000237186 MBTPS2O43462 519 aa14.94□□□□□ -0.02
UBE3D-201ENST00000237186 HRO43593 1189 aa14.94□□□□□ -0.02
UBE3D-201ENST00000237186 NSA2O95478 260 aaKnown RBP14.94□□□□□ -0.02
UBE3D-201ENST00000237186 IGKV1D-16P01601 117 aa14.94□□□□□ -0.02
UBE3D-201ENST00000237186 CSF2P04141 144 aa14.94□□□□□ -0.02
UBE3D-201ENST00000237186 CHRNB1P11230 501 aa14.94□□□□□ -0.02
UBE3D-201ENST00000237186 ATP6V1E1P36543 226 aa14.94□□□□□ -0.02
UBE3D-201ENST00000237186 SMAD4Q13485 552 aaKnown RBP14.94□□□□□ -0.02
UBE3D-201ENST00000237186 DDI2Q5TDH0 399 aa14.94□□□□□ -0.02
UBE3D-201ENST00000237186 XKRXQ6PP77 449 aa14.94□□□□□ -0.02
UBE3D-201ENST00000237186 THSD4Q6ZMP0 1018 aa14.94□□□□□ -0.02
UBE3D-201ENST00000237186 KIAA1143Q96AT1 154 aaPredicted RBP14.94□□□□□ -0.02
UBE3D-201ENST00000237186 ZNF578Q96N58 590 aaPredicted RBP14.94□□□□□ -0.02
UBE3D-201ENST00000237186 TIMP4Q99727 224 aa14.94□□□□□ -0.02
UBE3D-201ENST00000237186 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.94□□□□□ -0.02
UBE3D-201ENST00000237186 C14orf119Q9NWQ9 140 aa14.94□□□□□ -0.02
UBE3D-201ENST00000237186 TOR4AQ9NXH8 423 aa14.94□□□□□ -0.02
UBE3D-201ENST00000237186 SLCO1B1Q9Y6L6 691 aa14.94□□□□□ -0.02
UBE3D-201ENST00000237186 A0A0A6YYC8 382 aaPredicted RBP14.93□□□□□ -0.02
UBE3D-201ENST00000237186 LILRA5A6NI73 299 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 SLC22A31A6NKX4 558 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 TTC36A6NLP5 189 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 B4DGG1 531 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 I3L1I5 382 aaPredicted RBP14.93□□□□□ -0.02
UBE3D-201ENST00000237186 LRRTM2O43300 516 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 ZNF217O75362 1048 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 RFPL3O75679 317 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 FUT1P19526 365 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 CELP19835 753 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 EIF2B2P49770 351 aaKnown RBP14.93□□□□□ -0.02
UBE3D-201ENST00000237186 STX4Q12846 297 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 VASNQ6EMK4 673 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 RTL4Q6ZR62 310 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 ZNF550Q7Z398 422 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 ARL14Q8N4G2 192 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 SYT14Q8NB59 555 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 SLC37A3Q8NCC5 494 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 OR51G2Q8NGK0 314 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 HPS1Q92902 700 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 KISS1RQ969F8 398 aaPredicted RBP14.93□□□□□ -0.02
UBE3D-201ENST00000237186 CHRNA10Q9GZZ6 450 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 MIR1-1HGQ9H1L0 117 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 SLC2A4RGQ9NR83 387 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 BABAM2Q9NXR7 383 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 HAO2Q9NYQ3 351 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 DNAH14Q0VDD8 3507 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 C12orf71A8MTZ7 269 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 CD53P19397 219 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 PTNP21246 168 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 GPR3P46089 330 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 CAPZBP47756 277 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 GABRA4P48169 554 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 PSMD4P55036 377 aaKnown RBP14.93□□□□□ -0.02
UBE3D-201ENST00000237186 FGFBP1Q14512 234 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 ELOCQ15369 112 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 BAK1Q16611 211 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 ZNF791Q3KP31 576 aaPredicted RBP14.93□□□□□ -0.02
UBE3D-201ENST00000237186 CMIPQ8IY22 773 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 OR8H2Q8N162 312 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms