RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 GPR148Q8TDV2 347 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 CRB3Q9BUF7 120 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 IL21RQ9HBE5 538 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 LSM5Q9Y4Y9 91 aaKnown RBP12.98□□□□□ -0.33
HCFC2-201ENST00000229330 ACTL7AQ9Y615 435 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 ZNF705GA8MUZ8 300 aaPredicted RBP12.98□□□□□ -0.33
HCFC2-201ENST00000229330 NDUFB2O95178 105 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 EGFP01133 1207 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 SHC1P29353 583 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 TAS2R19P59542 299 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 HBA1P69905 142 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 TMUB2Q71RG4 321 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 KANSL1Q7Z3B3 1105 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 PAAF1Q9BRP4 392 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 EGLN3Q9H6Z9 239 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 DMRT3Q9NQL9 472 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 SLC9B1P1A6NJY1 282 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 PDGFRLQ15198 375 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 AANATQ16613 207 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 SLC5A12Q1EHB4 618 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 SLC29A4Q7RTT9 530 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 C12orf40Q86WS4 652 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 SUMF2Q8NBJ7 301 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 SERINC1Q9NRX5 453 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 C1GALT1Q9NS00 363 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 LRFN1Q9P244 771 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 SLCO3A1Q9UIG8 710 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 KCNK6Q9Y257 313 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 RAB19A4D1S5 217 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 GPR39O43194 453 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 HLA-AP01891 365 aaKnown RBP12.97□□□□□ -0.33
HCFC2-201ENST00000229330 ATXN1LP0C7T5 689 aaKnown RBP12.97□□□□□ -0.33
HCFC2-201ENST00000229330 ALG10BQ5I7T1 473 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 NANOGP1Q8N7R0 232 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 ZNF709Q8N972 641 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 ARRDC2Q8TBH0 407 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 MARC2Q969Z3 335 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 SAMD11Q96NU1 681 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 DDOQ99489 341 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 TMEM43Q9BTV4 400 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 G6PC3Q9BUM1 346 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 RNF186Q9NXI6 227 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 CAMK2AQ9UQM7 478 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 MED6O75586 246 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 FGF18O76093 207 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 LIPCP11150 499 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 NRG3P56975 720 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 P2RY14Q15391 338 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 ZNF296Q8WUU4 475 aaPredicted RBP12.97□□□□□ -0.33
HCFC2-201ENST00000229330 IGSF21Q96ID5 467 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 LURAP1Q96LR2 239 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 ATG4BQ9Y4P1 393 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 ZNF705FA8MVS1 300 aaPredicted RBP12.97□□□□□ -0.33
HCFC2-201ENST00000229330 P2RX6O15547 441 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 ADAM12O43184 909 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 ZNF705DP0CH99 300 aaPredicted RBP12.97□□□□□ -0.33
HCFC2-201ENST00000229330 ZNF705BP0CI00 300 aaPredicted RBP12.97□□□□□ -0.33
HCFC2-201ENST00000229330 SPINT3P49223 89 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 EXOSC2Q13868 293 aaKnown RBP12.97□□□□□ -0.33
HCFC2-201ENST00000229330 BATFQ16520 125 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 XKR7Q5GH72 579 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 ANKRD34AQ69YU3 496 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 OR5M3Q8NGP4 307 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 CHD4Q14839 1912 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 A0A0U1RQS6 177 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 TRABD2BA6NFA1 517 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 K7ERQ8 282 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 LATS1O95835 1130 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 GAAP10253 952 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 PIPP12273 146 aaPredicted RBP12.97□□□□□ -0.33
HCFC2-201ENST00000229330 MASP1P48740 699 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 SNRPGP62308 76 aaKnown RBP12.97□□□□□ -0.33
HCFC2-201ENST00000229330 CXADRP78310 365 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 PAPD4Q6PIY7 484 aaKnown RBP12.97□□□□□ -0.33
HCFC2-201ENST00000229330 C17orf99Q6UX52 265 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 PRSS58Q8IYP2 241 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 TMEM239Q8WW34 195 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 ZNF587Q96SQ5 575 aaPredicted RBP12.97□□□□□ -0.33
HCFC2-201ENST00000229330 C12orf57Q99622 126 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 DPH7Q9BTV6 452 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 GPR62Q9BZJ7 368 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 OR52D1Q9H346 318 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 PLCH1Q4KWH8 1693 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 KCNK2O95069 426 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 TRIM46Q7Z4K8 759 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 ST7LQ8TDW4 575 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 HERVK_113Q902F9 699 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 CDCA4Q9BXL8 241 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 PGAP2Q9UHJ9 254 aa12.97□□□□□ -0.33
HCFC2-201ENST00000229330 CSF3P09919 207 aa12.96□□□□□ -0.33
HCFC2-201ENST00000229330 ARNTP27540 789 aa12.96□□□□□ -0.33
HCFC2-201ENST00000229330 STK19P49842 368 aaPredicted RBP12.96□□□□□ -0.33
HCFC2-201ENST00000229330 TSPAN31Q12999 210 aa12.96□□□□□ -0.33
HCFC2-201ENST00000229330 FIGNL1Q6PIW4 674 aa12.96□□□□□ -0.33
HCFC2-201ENST00000229330 SMCO4Q9NRQ5 59 aa12.96□□□□□ -0.33
HCFC2-201ENST00000229330 PRICKLE3O43900 615 aaPredicted RBP12.96□□□□□ -0.33
HCFC2-201ENST00000229330 LEFTY1O75610 366 aa12.96□□□□□ -0.33
HCFC2-201ENST00000229330 SLC19A1P41440 591 aa12.96□□□□□ -0.33
HCFC2-201ENST00000229330 CLDN20P56880 219 aa12.96□□□□□ -0.33
HCFC2-201ENST00000229330 LMAN2Q12907 356 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms