RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 NXPE4Q6UWF7 544 aa16.46■□□□□ 0.23
CDKN1B-201ENST00000228872 HTR3DQ70Z44 454 aa16.46■□□□□ 0.23
CDKN1B-201ENST00000228872 SZRD1Q7Z422 152 aa16.46■□□□□ 0.23
CDKN1B-201ENST00000228872 PXKQ7Z7A4 578 aa16.46■□□□□ 0.23
CDKN1B-201ENST00000228872 IZUMO1Q8IYV9 350 aa16.46■□□□□ 0.23
CDKN1B-201ENST00000228872 OR1S1Q8NH92 325 aa16.46■□□□□ 0.23
CDKN1B-201ENST00000228872 PIGXQ8TBF5 258 aa16.46■□□□□ 0.23
CDKN1B-201ENST00000228872 SLC5A11Q8WWX8 675 aa16.46■□□□□ 0.23
CDKN1B-201ENST00000228872 MRPS24Q96EL2 167 aaKnown RBP16.46■□□□□ 0.23
CDKN1B-201ENST00000228872 SLC35G5Q96KT7 338 aa16.46■□□□□ 0.23
CDKN1B-201ENST00000228872 IFT27Q9BW83 186 aa16.46■□□□□ 0.23
CDKN1B-201ENST00000228872 ZCCHC4Q9H5U6 513 aa16.46■□□□□ 0.23
CDKN1B-201ENST00000228872 HRASLSQ9HDD0 168 aa16.46■□□□□ 0.23
CDKN1B-201ENST00000228872 NOTCH4Q99466 2003 aa16.45■□□□□ 0.22
CDKN1B-201ENST00000228872 A0A1W2PRU2 124 aa16.45■□□□□ 0.22
CDKN1B-201ENST00000228872 NRG2O14511 850 aaPredicted RBP16.45■□□□□ 0.22
CDKN1B-201ENST00000228872 CTDSPLO15194 276 aa16.45■□□□□ 0.22
CDKN1B-201ENST00000228872 MID1O15344 667 aa16.45■□□□□ 0.22
CDKN1B-201ENST00000228872 SNAPC5O75971 98 aa16.45■□□□□ 0.22
CDKN1B-201ENST00000228872 ATF1P18846 271 aa16.45■□□□□ 0.22
CDKN1B-201ENST00000228872 RAB3BP20337 219 aa16.45■□□□□ 0.22
CDKN1B-201ENST00000228872 S100A11P31949 105 aa16.45■□□□□ 0.22
CDKN1B-201ENST00000228872 RAP2BP61225 183 aa16.45■□□□□ 0.22
CDKN1B-201ENST00000228872 ZFPM2Q8WW38 1151 aa16.45■□□□□ 0.22
CDKN1B-201ENST00000228872 TM4SF18Q96CE8 201 aa16.45■□□□□ 0.22
CDKN1B-201ENST00000228872 IL20RAQ9UHF4 553 aa16.45■□□□□ 0.22
CDKN1B-201ENST00000228872 CLEC4EQ9ULY5 219 aa16.45■□□□□ 0.22
CDKN1B-201ENST00000228872 RCE1Q9Y256 329 aa16.45■□□□□ 0.22
CDKN1B-201ENST00000228872 NPFFR2Q9Y5X5 522 aa16.45■□□□□ 0.22
CDKN1B-201ENST00000228872 ZC3H12DA2A288 527 aaKnown RBP16.45■□□□□ 0.22
CDKN1B-201ENST00000228872 PRR23D1E9PI22 279 aaPredicted RBP16.45■□□□□ 0.22
CDKN1B-201ENST00000228872 RTCAO00442 366 aaKnown RBP16.45■□□□□ 0.22
CDKN1B-201ENST00000228872 ARPC1BO15143 372 aaKnown RBP16.45■□□□□ 0.22
CDKN1B-201ENST00000228872 GATBO75879 557 aaKnown RBP16.45■□□□□ 0.22
CDKN1B-201ENST00000228872 CBX7O95931 251 aa16.45■□□□□ 0.22
CDKN1B-201ENST00000228872 SERPIND1P05546 499 aa16.45■□□□□ 0.22
CDKN1B-201ENST00000228872 CHRM4P08173 479 aa16.45■□□□□ 0.22
CDKN1B-201ENST00000228872 PRR23D2P0DMB1 279 aaPredicted RBP16.45■□□□□ 0.22
CDKN1B-201ENST00000228872 CD53P19397 219 aa16.45■□□□□ 0.22
CDKN1B-201ENST00000228872 DDX6P26196 483 aaKnown RBP eCLIP16.45■□□□□ 0.224e-7■■■■□ 23.8
CDKN1B-201ENST00000228872 STAT5AP42229 794 aa16.45■□□□□ 0.22
CDKN1B-201ENST00000228872 GNA13Q14344 377 aa16.45■□□□□ 0.22
CDKN1B-201ENST00000228872 TRAM2Q15035 370 aa16.45■□□□□ 0.22
CDKN1B-201ENST00000228872 BAIAP2L2Q6UXY1 529 aa16.45■□□□□ 0.22
CDKN1B-201ENST00000228872 CXXC5Q7LFL8 322 aaKnown RBP16.45■□□□□ 0.22
CDKN1B-201ENST00000228872 ZNF454Q8N9F8 522 aa16.45■□□□□ 0.22
CDKN1B-201ENST00000228872 BBS10Q8TAM1 723 aa16.45■□□□□ 0.22
CDKN1B-201ENST00000228872 EXOSC8Q96B26 276 aaKnown RBP16.45■□□□□ 0.22
CDKN1B-201ENST00000228872 PPP1R16AQ96I34 528 aa16.45■□□□□ 0.22
CDKN1B-201ENST00000228872 ORAI3Q9BRQ5 295 aa16.45■□□□□ 0.22
CDKN1B-201ENST00000228872 SGPP1Q9BX95 441 aa16.45■□□□□ 0.22
CDKN1B-201ENST00000228872 MTG2Q9H4K7 406 aa16.45■□□□□ 0.22
CDKN1B-201ENST00000228872 SEMA4GQ9NTN9 838 aa16.45■□□□□ 0.22
CDKN1B-201ENST00000228872 IL20Q9NYY1 176 aa16.45■□□□□ 0.22
CDKN1B-201ENST00000228872 FAM74A7A6NL05 159 aa16.44■□□□□ 0.22
CDKN1B-201ENST00000228872 OR5K4A6NMS3 321 aa16.44■□□□□ 0.22
CDKN1B-201ENST00000228872 GRXCR1A8MXD5 290 aa16.44■□□□□ 0.22
CDKN1B-201ENST00000228872 TBX19O60806 448 aa16.44■□□□□ 0.22
CDKN1B-201ENST00000228872 CA3P07451 260 aa16.44■□□□□ 0.22
CDKN1B-201ENST00000228872 HNRNPA1P09651 372 aaKnown RBP eCLIP16.44■□□□□ 0.22
CDKN1B-201ENST00000228872 HOXB1P14653 301 aaPredicted RBP16.44■□□□□ 0.22
CDKN1B-201ENST00000228872 GABRA1P14867 456 aa16.44■□□□□ 0.22
CDKN1B-201ENST00000228872 PSMA6P60900 246 aaKnown RBP16.44■□□□□ 0.22
CDKN1B-201ENST00000228872 FAM74A3Q4VXF1 159 aa16.44■□□□□ 0.22
CDKN1B-201ENST00000228872 SLC25A25Q6KCM7 469 aa16.44■□□□□ 0.22
CDKN1B-201ENST00000228872 TMUB2Q71RG4 321 aa16.44■□□□□ 0.22
CDKN1B-201ENST00000228872 KRT78Q8N1N4 520 aa16.44■□□□□ 0.22
CDKN1B-201ENST00000228872 CHD7Q9P2D1 2997 aa16.44■□□□□ 0.22
CDKN1B-201ENST00000228872 D6RAR5 112 aa16.44■□□□□ 0.22
CDKN1B-201ENST00000228872 PLPP1O14494 284 aa16.44■□□□□ 0.22
CDKN1B-201ENST00000228872 PLPP2O43688 288 aa16.44■□□□□ 0.22
CDKN1B-201ENST00000228872 C1orf105O95561 183 aa16.44■□□□□ 0.22
CDKN1B-201ENST00000228872 POU2F2P09086 479 aa16.44■□□□□ 0.22
CDKN1B-201ENST00000228872 SAGP10523 405 aaPredicted RBP16.44■□□□□ 0.22
CDKN1B-201ENST00000228872 CPN1P15169 458 aa16.44■□□□□ 0.22
CDKN1B-201ENST00000228872 PAICSP22234 425 aaKnown RBP16.44■□□□□ 0.22
CDKN1B-201ENST00000228872 FPR3P25089 353 aa16.44■□□□□ 0.22
CDKN1B-201ENST00000228872 CCR2P41597 374 aa16.44■□□□□ 0.22
CDKN1B-201ENST00000228872 FRKP42685 505 aaPredicted RBP16.44■□□□□ 0.22
CDKN1B-201ENST00000228872 GPR4P46093 362 aa16.44■□□□□ 0.22
CDKN1B-201ENST00000228872 SNRPD1P62314 119 aaKnown RBP16.44■□□□□ 0.22
CDKN1B-201ENST00000228872 TRAM1Q15629 374 aa16.44■□□□□ 0.22
CDKN1B-201ENST00000228872 PIP5KL1Q5T9C9 394 aa16.44■□□□□ 0.22
CDKN1B-201ENST00000228872 FAM109BQ6ICB4 259 aaPredicted RBP16.44■□□□□ 0.22
CDKN1B-201ENST00000228872 GLDNQ6ZMI3 551 aaPredicted RBP16.44■□□□□ 0.22
CDKN1B-201ENST00000228872 NAXDQ8IW45 347 aa16.44■□□□□ 0.22
CDKN1B-201ENST00000228872 PDZD9Q8IXQ8 264 aa16.44■□□□□ 0.22
CDKN1B-201ENST00000228872 KCT2Q8NC54 265 aa16.44■□□□□ 0.22
CDKN1B-201ENST00000228872 SLC38A3Q99624 504 aa16.44■□□□□ 0.22
CDKN1B-201ENST00000228872 FAM83CQ9BQN1 747 aa16.44■□□□□ 0.22
CDKN1B-201ENST00000228872 SLC46A2Q9BY10 475 aa16.44■□□□□ 0.22
CDKN1B-201ENST00000228872 ABRACLQ9P1F3 81 aa16.44■□□□□ 0.22
CDKN1B-201ENST00000228872 ZNF69Q9UC07 566 aa16.44■□□□□ 0.22
CDKN1B-201ENST00000228872 PRKAB1Q9Y478 270 aa16.44■□□□□ 0.22
CDKN1B-201ENST00000228872 DAPL1A0PJW8 107 aa16.43■□□□□ 0.22
CDKN1B-201ENST00000228872 CPSF4LA6NMK7 179 aaKnown RBP16.43■□□□□ 0.22
CDKN1B-201ENST00000228872 SC5DO75845 299 aa16.43■□□□□ 0.22
CDKN1B-201ENST00000228872 OR2A4O95047 310 aa16.43■□□□□ 0.22
CDKN1B-201ENST00000228872 IFNGR1P15260 489 aa16.43■□□□□ 0.22
CDKN1B-201ENST00000228872 PPP3CBP16298 524 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms