RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 TCEA2Q15560 299 aa16.03■□□□□ 0.16
USB1-201ENST00000219281 TBC1D3GQ6DHY5 549 aa16.03■□□□□ 0.16
USB1-201ENST00000219281 ZNF425Q6IV72 752 aa16.03■□□□□ 0.16
USB1-201ENST00000219281 CREB3L2Q70SY1 520 aa16.03■□□□□ 0.16
USB1-201ENST00000219281 KRT74Q7RTS7 529 aa16.03■□□□□ 0.16
USB1-201ENST00000219281 VN1R4Q7Z5H5 301 aa16.03■□□□□ 0.16
USB1-201ENST00000219281 OAFQ86UD1 273 aa16.03■□□□□ 0.16
USB1-201ENST00000219281 OR4E2Q8NGC2 313 aa16.03■□□□□ 0.16
USB1-201ENST00000219281 SDF2Q99470 211 aa16.03■□□□□ 0.16
USB1-201ENST00000219281 KXD1Q9BQD3 176 aa16.03■□□□□ 0.16
USB1-201ENST00000219281 TRAF4Q9BUZ4 470 aaPredicted RBP16.03■□□□□ 0.16
USB1-201ENST00000219281 ZNF624Q9P2J8 865 aaPredicted RBP16.03■□□□□ 0.16
USB1-201ENST00000219281 STON1Q9Y6Q2 735 aa16.03■□□□□ 0.16
USB1-201ENST00000219281 TRAV6A0A075B6T7 132 aa16.02■□□□□ 0.16
USB1-201ENST00000219281 AGR2O95994 175 aa16.02■□□□□ 0.16
USB1-201ENST00000219281 MT-ND5P03915 603 aa16.02■□□□□ 0.16
USB1-201ENST00000219281 HK1P19367 917 aa16.02■□□□□ 0.16
USB1-201ENST00000219281 NPR2P20594 1047 aa16.02■□□□□ 0.16
USB1-201ENST00000219281 SOX9P48436 509 aa16.02■□□□□ 0.16
USB1-201ENST00000219281 SIM1P81133 766 aaPredicted RBP16.02■□□□□ 0.16
USB1-201ENST00000219281 DUSP8Q13202 625 aa16.02■□□□□ 0.16
USB1-201ENST00000219281 OR1Q1Q15612 314 aa16.02■□□□□ 0.16
USB1-201ENST00000219281 ABHD4Q8TB40 342 aa16.02■□□□□ 0.16
USB1-201ENST00000219281 TMEM239Q8WW34 195 aa16.02■□□□□ 0.16
USB1-201ENST00000219281 FGF14Q92915 247 aa16.02■□□□□ 0.16
USB1-201ENST00000219281 PHF21AQ96BD5 680 aa16.02■□□□□ 0.16
USB1-201ENST00000219281 ABHD1Q96SE0 405 aa16.02■□□□□ 0.16
USB1-201ENST00000219281 NDC1Q9BTX1 674 aa16.02■□□□□ 0.16
USB1-201ENST00000219281 IFT27Q9BW83 186 aa16.02■□□□□ 0.16
USB1-201ENST00000219281 NKX2-4Q9H2Z4 354 aa16.02■□□□□ 0.16
USB1-201ENST00000219281 FOLH1BQ9HBA9 442 aa16.02■□□□□ 0.16
USB1-201ENST00000219281 CLDND1Q9NY35 253 aa16.02■□□□□ 0.16
USB1-201ENST00000219281 CACNG2Q9Y698 323 aa16.02■□□□□ 0.16
USB1-201ENST00000219281 NPIPA5A0A0B4J1W7 369 aa16.02■□□□□ 0.15
USB1-201ENST00000219281 SYNDIG1LA6NDD5 238 aa16.02■□□□□ 0.15
USB1-201ENST00000219281 PRR23D1E9PI22 279 aaPredicted RBP16.02■□□□□ 0.15
USB1-201ENST00000219281 NPIPA7E9PJI5 369 aa16.02■□□□□ 0.15
USB1-201ENST00000219281 J3QLW9 94 aa16.02■□□□□ 0.15
USB1-201ENST00000219281 BTN3A3O00478 584 aa16.02■□□□□ 0.15
USB1-201ENST00000219281 FABP7O15540 132 aa16.02■□□□□ 0.15
USB1-201ENST00000219281 TSC22D2O75157 780 aa16.02■□□□□ 0.15
USB1-201ENST00000219281 DNAJB6O75190 326 aa16.02■□□□□ 0.15
USB1-201ENST00000219281 NPIPA8P0DM63 369 aa16.02■□□□□ 0.15
USB1-201ENST00000219281 PRR23D2P0DMB1 279 aaPredicted RBP16.02■□□□□ 0.15
USB1-201ENST00000219281 ZNF19P17023 458 aa16.02■□□□□ 0.15
USB1-201ENST00000219281 BTCP35070 178 aa16.02■□□□□ 0.15
USB1-201ENST00000219281 C19orf57Q0VDD7 668 aa16.02■□□□□ 0.15
USB1-201ENST00000219281 SLC25A35Q3KQZ1 300 aa16.02■□□□□ 0.15
USB1-201ENST00000219281 TRMT12Q53H54 448 aaKnown RBP16.02■□□□□ 0.15
USB1-201ENST00000219281 EIPR1Q53HC9 387 aa16.02■□□□□ 0.15
USB1-201ENST00000219281 PARM1Q6UWI2 310 aa16.02■□□□□ 0.15
USB1-201ENST00000219281 RPTNQ6XPR3 784 aa16.02■□□□□ 0.15
USB1-201ENST00000219281 THSD4Q6ZMP0 1018 aa16.02■□□□□ 0.15
USB1-201ENST00000219281 ZNF767PQ75MW2 155 aa16.02■□□□□ 0.15
USB1-201ENST00000219281 LNX2Q8N448 690 aa16.02■□□□□ 0.15
USB1-201ENST00000219281 TRMT10AQ8TBZ6 339 aaKnown RBP16.02■□□□□ 0.15
USB1-201ENST00000219281 KCTD12Q96CX2 325 aaKnown RBP16.02■□□□□ 0.15
USB1-201ENST00000219281 ARSGQ96EG1 525 aa16.02■□□□□ 0.15
USB1-201ENST00000219281 HYLS1Q96M11 299 aa16.02■□□□□ 0.15
USB1-201ENST00000219281 TEAD3Q99594 435 aa16.02■□□□□ 0.15
USB1-201ENST00000219281 MED28Q9H204 178 aa16.02■□□□□ 0.15
USB1-201ENST00000219281 KLHL1Q9NR64 748 aa16.02■□□□□ 0.15
USB1-201ENST00000219281 NTMQ9P121 344 aa16.02■□□□□ 0.15
USB1-201ENST00000219281 SLC23A1Q9UHI7 598 aa16.02■□□□□ 0.15
USB1-201ENST00000219281 TEKT2Q9UIF3 430 aa16.02■□□□□ 0.15
USB1-201ENST00000219281 SLC9B1P1A6NJY1 282 aa16.01■□□□□ 0.15
USB1-201ENST00000219281 PLPP2O43688 288 aa16.01■□□□□ 0.15
USB1-201ENST00000219281 CHP2O43745 196 aa16.01■□□□□ 0.15
USB1-201ENST00000219281 CLUP10909 449 aa16.01■□□□□ 0.15
USB1-201ENST00000219281 ACVR1BP36896 505 aa16.01■□□□□ 0.15
USB1-201ENST00000219281 P2RX3P56373 397 aa16.01■□□□□ 0.15
USB1-201ENST00000219281 FOXK2Q01167 660 aa16.01■□□□□ 0.15
USB1-201ENST00000219281 TNFRSF17Q02223 184 aa16.01■□□□□ 0.15
USB1-201ENST00000219281 ENPP2Q13822 863 aa16.01■□□□□ 0.15
USB1-201ENST00000219281 NTRK2Q16620 822 aa16.01■□□□□ 0.15
USB1-201ENST00000219281 OR2L13Q8N349 312 aa16.01■□□□□ 0.15
USB1-201ENST00000219281 C9orf62Q8N4C0 152 aa16.01■□□□□ 0.15
USB1-201ENST00000219281 C17orf47Q8NEP4 570 aa16.01■□□□□ 0.15
USB1-201ENST00000219281 OR4K14Q8NGD5 310 aa16.01■□□□□ 0.15
USB1-201ENST00000219281 OR13C2Q8NGS9 318 aa16.01■□□□□ 0.15
USB1-201ENST00000219281 ZCCHC10Q8TBK6 192 aa16.01■□□□□ 0.15
USB1-201ENST00000219281 GAL3ST3Q96A11 431 aa16.01■□□□□ 0.15
USB1-201ENST00000219281 C4orf36Q96KX1 117 aa16.01■□□□□ 0.15
USB1-201ENST00000219281 DZANK1Q9NVP4 752 aa16.01■□□□□ 0.15
USB1-201ENST00000219281 FBXO34Q9NWN3 711 aa16.01■□□□□ 0.15
USB1-201ENST00000219281 ZMIZ1Q9ULJ6 1067 aa16.01■□□□□ 0.15
USB1-201ENST00000219281 CLEC4AQ9UMR7 237 aa16.01■□□□□ 0.15
USB1-201ENST00000219281 ATG2BQ96BY7 2078 aa16.01■□□□□ 0.15
USB1-201ENST00000219281 A0A0G2JK05 382 aa16.01■□□□□ 0.15
USB1-201ENST00000219281 FAM86C2PA6NEL3 165 aa16.01■□□□□ 0.15
USB1-201ENST00000219281 FZD7O75084 574 aa16.01■□□□□ 0.15
USB1-201ENST00000219281 SNRNP200O75643 2136 aaKnown RBP16.01■□□□□ 0.15
USB1-201ENST00000219281 SOX30O94993 753 aa16.01■□□□□ 0.15
USB1-201ENST00000219281 NOS3P29474 1203 aa16.01■□□□□ 0.15
USB1-201ENST00000219281 ID2Q02363 134 aa16.01■□□□□ 0.15
USB1-201ENST00000219281 RNASE12Q5GAN4 147 aaKnown RBP16.01■□□□□ 0.15
USB1-201ENST00000219281 MRPL2Q5T653 305 aaKnown RBP16.01■□□□□ 0.15
USB1-201ENST00000219281 PAQR7Q86WK9 346 aa16.01■□□□□ 0.15
USB1-201ENST00000219281 OR5H6Q8NGV6 325 aa16.01■□□□□ 0.15
USB1-201ENST00000219281 RSPH9Q9H1X1 276 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms