RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 ENDOUP21128 410 aaKnown RBP27.37■■□□□ 1.97
PABPN1-201ENST00000216727 FXYD6P3P58550 94 aa27.37■■□□□ 1.97
PABPN1-201ENST00000216727 PMS2CLQ68D20 193 aa27.37■■□□□ 1.97
PABPN1-201ENST00000216727 KANSL1Q7Z3B3 1105 aa27.37■■□□□ 1.97
PABPN1-201ENST00000216727 TMEM151BQ8IW70 566 aa27.37■■□□□ 1.97
PABPN1-201ENST00000216727 DEFB123Q8N688 67 aa27.37■■□□□ 1.97
PABPN1-201ENST00000216727 OR52L1Q8NGH7 329 aa27.37■■□□□ 1.97
PABPN1-201ENST00000216727 CCDC74AQ96AQ1 378 aa27.37■■□□□ 1.97
PABPN1-201ENST00000216727 ZNF501Q96CX3 271 aaPredicted RBP27.37■■□□□ 1.97
PABPN1-201ENST00000216727 MEPEQ9NQ76 525 aaPredicted RBP27.37■■□□□ 1.97
PABPN1-201ENST00000216727 MUTYHQ9UIF7 546 aa27.37■■□□□ 1.97
PABPN1-201ENST00000216727 SERINC4A6NH21 518 aa27.36■■□□□ 1.97
PABPN1-201ENST00000216727 EFCAB7A8K855 629 aa27.36■■□□□ 1.97
PABPN1-201ENST00000216727 A8MU76 341 aa27.36■■□□□ 1.97
PABPN1-201ENST00000216727 POLR1CO15160 346 aaPredicted RBP27.36■■□□□ 1.97
PABPN1-201ENST00000216727 HBQ1P09105 142 aa27.36■■□□□ 1.97
PABPN1-201ENST00000216727 TBXA2RP21731 343 aa27.36■■□□□ 1.97
PABPN1-201ENST00000216727 PRAMEF17Q5VTA0 474 aa27.36■■□□□ 1.97
PABPN1-201ENST00000216727 BMP8AQ7Z5Y6 402 aa27.36■■□□□ 1.97
PABPN1-201ENST00000216727 OR4C3Q8NH37 302 aa27.36■■□□□ 1.97
PABPN1-201ENST00000216727 NUDT22Q9BRQ3 303 aa27.36■■□□□ 1.97
PABPN1-201ENST00000216727 CFL2Q9Y281 166 aa27.36■■□□□ 1.97
PABPN1-201ENST00000216727 LOC100506127A0A0U1RQW1 187 aa27.36■■□□□ 1.97
PABPN1-201ENST00000216727 CLDN25C9JDP6 229 aa27.36■■□□□ 1.97
PABPN1-201ENST00000216727 BMP7P18075 431 aa27.36■■□□□ 1.97
PABPN1-201ENST00000216727 MYL12AP19105 171 aa27.36■■□□□ 1.97
PABPN1-201ENST00000216727 FBLP22087 321 aaKnown RBP27.36■■□□□ 1.97
PABPN1-201ENST00000216727 PPICP45877 212 aa27.36■■□□□ 1.97
PABPN1-201ENST00000216727 CDH11P55287 796 aa27.36■■□□□ 1.97
PABPN1-201ENST00000216727 MLLT11Q13015 90 aaPredicted RBP27.36■■□□□ 1.97
PABPN1-201ENST00000216727 NXNL2Q5VZ03 156 aa27.36■■□□□ 1.97
PABPN1-201ENST00000216727 LINC00114Q6XXX2 140 aa27.36■■□□□ 1.97
PABPN1-201ENST00000216727 HSDL2Q6YN16 418 aa27.36■■□□□ 1.97
PABPN1-201ENST00000216727 ARHGAP22Q7Z5H3 698 aa27.36■■□□□ 1.97
PABPN1-201ENST00000216727 OR6Q1Q8NGQ2 317 aa27.36■■□□□ 1.97
PABPN1-201ENST00000216727 S100ZQ8WXG8 99 aa27.36■■□□□ 1.97
PABPN1-201ENST00000216727 TSLPQ969D9 159 aa27.36■■□□□ 1.97
PABPN1-201ENST00000216727 CHCHD6Q9BRQ6 235 aa27.36■■□□□ 1.97
PABPN1-201ENST00000216727 HMG20AQ9NP66 347 aa27.36■■□□□ 1.97
PABPN1-201ENST00000216727 AKIP1Q9NQ31 210 aa27.36■■□□□ 1.97
PABPN1-201ENST00000216727 IL20RAQ9UHF4 553 aa27.36■■□□□ 1.97
PABPN1-201ENST00000216727 A0A1B0GX78 115 aa27.35■■□□□ 1.97
PABPN1-201ENST00000216727 KPNA4O00629 521 aaPredicted RBP27.35■■□□□ 1.97
PABPN1-201ENST00000216727 BHLHE40O14503 412 aa27.35■■□□□ 1.97
PABPN1-201ENST00000216727 ALG10BQ5I7T1 473 aa27.35■■□□□ 1.97
PABPN1-201ENST00000216727 ULK3Q6PHR2 472 aa27.35■■□□□ 1.97
PABPN1-201ENST00000216727 WDR5BQ86VZ2 330 aa27.35■■□□□ 1.97
PABPN1-201ENST00000216727 CENPOQ9BU64 300 aa27.35■■□□□ 1.97
PABPN1-201ENST00000216727 FGF21Q9NSA1 209 aa27.35■■□□□ 1.97
PABPN1-201ENST00000216727 SUSD2Q9UGT4 822 aa27.35■■□□□ 1.97
PABPN1-201ENST00000216727 SIGLEC7Q9Y286 467 aa27.35■■□□□ 1.97
PABPN1-201ENST00000216727 TMEM129A0AVI4 362 aa27.34■■□□□ 1.97
PABPN1-201ENST00000216727 IGKV3-11P04433 115 aa27.34■■□□□ 1.97
PABPN1-201ENST00000216727 RORAP35398 523 aa27.34■■□□□ 1.97
PABPN1-201ENST00000216727 ETV5P41161 510 aa27.34■■□□□ 1.97
PABPN1-201ENST00000216727 ETV1P50549 477 aa27.34■■□□□ 1.97
PABPN1-201ENST00000216727 SQSTM1Q13501 440 aa27.34■■□□□ 1.97
PABPN1-201ENST00000216727 ZNF846Q147U1 533 aa27.34■■□□□ 1.97
PABPN1-201ENST00000216727 ELAVL1Q15717 326 aaKnown RBP27.34■■□□□ 1.97
PABPN1-201ENST00000216727 KLHL26Q53HC5 615 aa27.34■■□□□ 1.97
PABPN1-201ENST00000216727 PAQR6Q6TCH4 344 aa27.34■■□□□ 1.97
PABPN1-201ENST00000216727 LNX2Q8N448 690 aa27.34■■□□□ 1.97
PABPN1-201ENST00000216727 ARSGQ96EG1 525 aa27.34■■□□□ 1.97
PABPN1-201ENST00000216727 HOXD1Q9GZZ0 328 aa27.34■■□□□ 1.97
PABPN1-201ENST00000216727 SLC35A3Q9Y2D2 325 aa27.34■■□□□ 1.97
PABPN1-201ENST00000216727 EXOSC1Q9Y3B2 195 aaKnown RBP27.34■■□□□ 1.97
PABPN1-201ENST00000216727 CORINQ9Y5Q5 1042 aa27.34■■□□□ 1.97
PABPN1-201ENST00000216727 CLCA3PQ9Y6N3 262 aa27.34■■□□□ 1.97
PABPN1-201ENST00000216727 A3GALT2U3KPV4 340 aa27.34■■□□□ 1.97
PABPN1-201ENST00000216727 A0A1B0GTQ1 180 aa27.34■■□□□ 1.97
PABPN1-201ENST00000216727 TCRBV16S1A1N1A0A5B0 115 aa27.34■■□□□ 1.97
PABPN1-201ENST00000216727 CSTAP01040 98 aa27.34■■□□□ 1.97
PABPN1-201ENST00000216727 TMEM71Q6P5X7 295 aa27.34■■□□□ 1.97
PABPN1-201ENST00000216727 WDR12Q9GZL7 423 aaKnown RBP27.34■■□□□ 1.97
PABPN1-201ENST00000216727 FN3KQ9H479 309 aa27.34■■□□□ 1.97
PABPN1-201ENST00000216727 CHCHD3Q9NX63 227 aaKnown RBP27.34■■□□□ 1.97
PABPN1-201ENST00000216727 PILRBQ9UKJ0 227 aa27.34■■□□□ 1.97
PABPN1-201ENST00000216727 SEC16AO15027 2179 aa27.34■■□□□ 1.97
PABPN1-201ENST00000216727 RP1P56715 2156 aa27.34■■□□□ 1.97
PABPN1-201ENST00000216727 RFPL3O75679 317 aa27.33■■□□□ 1.97
PABPN1-201ENST00000216727 TDGF1P13385 188 aa27.33■■□□□ 1.97
PABPN1-201ENST00000216727 FUT1P19526 365 aa27.33■■□□□ 1.97
PABPN1-201ENST00000216727 ANKDD1AQ495B1 522 aa27.33■■□□□ 1.97
PABPN1-201ENST00000216727 GDPGP1Q6ZNW5 385 aa27.33■■□□□ 1.97
PABPN1-201ENST00000216727 AMER2Q8N7J2 671 aa27.33■■□□□ 1.97
PABPN1-201ENST00000216727 ZNF321PQ8N8H1 164 aa27.33■■□□□ 1.97
PABPN1-201ENST00000216727 NUP210LQ5VU65 1888 aa27.33■■□□□ 1.97
PABPN1-201ENST00000216727 PTP4A3O75365 173 aa27.33■■□□□ 1.96
PABPN1-201ENST00000216727 HTR1FP30939 366 aa27.33■■□□□ 1.96
PABPN1-201ENST00000216727 ADH7P40394 386 aa27.33■■□□□ 1.96
PABPN1-201ENST00000216727 SOWAHCQ53LP3 525 aaPredicted RBP27.33■■□□□ 1.96
PABPN1-201ENST00000216727 SMARCD3Q6STE5 483 aa27.33■■□□□ 1.96
PABPN1-201ENST00000216727 SLITRK4Q8IW52 837 aa27.33■■□□□ 1.96
PABPN1-201ENST00000216727 ZNF440Q8IYI8 595 aa27.33■■□□□ 1.96
PABPN1-201ENST00000216727 MMP27Q9H306 513 aa27.33■■□□□ 1.96
PABPN1-201ENST00000216727 PRMT8Q9NR22 394 aaPredicted RBP27.33■■□□□ 1.96
PABPN1-201ENST00000216727 CCDC59Q9P031 241 aaKnown RBP27.33■■□□□ 1.96
PABPN1-201ENST00000216727 B3GNT3Q9Y2A9 372 aa27.33■■□□□ 1.96
PABPN1-201ENST00000216727 HCN1O60741 890 aa27.32■■□□□ 1.96
PABPN1-201ENST00000216727 IL33O95760 270 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms