RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 ACKR1Q16570 336 aa13.43□□□□□ -0.26
UPK3A-201ENST00000216211 CTU2Q2VPK5 515 aaKnown RBP13.43□□□□□ -0.26
UPK3A-201ENST00000216211 Q5PR19 223 aa13.43□□□□□ -0.26
UPK3A-201ENST00000216211 CPTPQ5TA50 214 aa13.43□□□□□ -0.26
UPK3A-201ENST00000216211 ZCCHC12Q6PEW1 402 aa13.43□□□□□ -0.26
UPK3A-201ENST00000216211 R3HCC1LQ7Z5L2 792 aaKnown RBP13.43□□□□□ -0.26
UPK3A-201ENST00000216211 P3H2Q8IVL5 708 aa13.43□□□□□ -0.26
UPK3A-201ENST00000216211 FITM2Q8N6M3 262 aa13.43□□□□□ -0.26
UPK3A-201ENST00000216211 OR7A2PQ8NGA2 310 aa13.43□□□□□ -0.26
UPK3A-201ENST00000216211 OR6K3Q8NGY3 331 aa13.43□□□□□ -0.26
UPK3A-201ENST00000216211 POC1BQ8TC44 478 aa13.43□□□□□ -0.26
UPK3A-201ENST00000216211 AGR3Q8TD06 166 aa13.43□□□□□ -0.26
UPK3A-201ENST00000216211 PIGTQ969N2 578 aa13.43□□□□□ -0.26
UPK3A-201ENST00000216211 ZBTB8AQ96BR9 441 aa13.43□□□□□ -0.26
UPK3A-201ENST00000216211 MTERF3Q96E29 417 aa13.43□□□□□ -0.26
UPK3A-201ENST00000216211 GMPPAQ96IJ6 420 aaPredicted RBP13.43□□□□□ -0.26
UPK3A-201ENST00000216211 CCL19Q99731 98 aa13.43□□□□□ -0.26
UPK3A-201ENST00000216211 PIP5K1AQ99755 562 aa13.43□□□□□ -0.26
UPK3A-201ENST00000216211 TMEM185BQ9H7F4 350 aa13.43□□□□□ -0.26
UPK3A-201ENST00000216211 PLSCR4Q9NRQ2 329 aa13.43□□□□□ -0.26
UPK3A-201ENST00000216211 UBQLN4Q9NRR5 601 aa13.43□□□□□ -0.26
UPK3A-201ENST00000216211 ZCCHC3Q9NUD5 404 aaKnown RBP13.43□□□□□ -0.26
UPK3A-201ENST00000216211 MCTS1Q9ULC4 181 aaKnown RBP13.43□□□□□ -0.26
UPK3A-201ENST00000216211 RAP2CQ9Y3L5 183 aa13.43□□□□□ -0.26
UPK3A-201ENST00000216211 TRAF6Q9Y4K3 522 aa13.43□□□□□ -0.26
UPK3A-201ENST00000216211 A0A0J9YW62 118 aa13.42□□□□□ -0.26
UPK3A-201ENST00000216211 C7orf72A4D263 438 aa13.42□□□□□ -0.26
UPK3A-201ENST00000216211 SCDO00767 359 aa13.42□□□□□ -0.26
UPK3A-201ENST00000216211 SCAMP2O15127 329 aaKnown RBP13.42□□□□□ -0.26
UPK3A-201ENST00000216211 ARHGEF9O43307 516 aa13.42□□□□□ -0.26
UPK3A-201ENST00000216211 SS18L1O75177 396 aaPredicted RBP13.42□□□□□ -0.26
UPK3A-201ENST00000216211 PEX11AO75192 247 aa13.42□□□□□ -0.26
UPK3A-201ENST00000216211 SYNGR4O95473 234 aa13.42□□□□□ -0.26
UPK3A-201ENST00000216211 HMGN2P05204 90 aaKnown RBP13.42□□□□□ -0.26
UPK3A-201ENST00000216211 THBDP07204 575 aa13.42□□□□□ -0.26
UPK3A-201ENST00000216211 FGF4P08620 206 aa13.42□□□□□ -0.26
UPK3A-201ENST00000216211 IL11P20809 199 aa13.42□□□□□ -0.26
UPK3A-201ENST00000216211 PSMA4P25789 261 aaKnown RBP13.42□□□□□ -0.26
UPK3A-201ENST00000216211 LCN1P31025 176 aa13.42□□□□□ -0.26
UPK3A-201ENST00000216211 HPCAL1P37235 193 aa13.42□□□□□ -0.26
UPK3A-201ENST00000216211 PRIM2P49643 509 aa13.42□□□□□ -0.26
UPK3A-201ENST00000216211 RNF144AP50876 292 aaPredicted RBP13.42□□□□□ -0.26
UPK3A-201ENST00000216211 LTBQ06643 244 aa13.42□□□□□ -0.26
UPK3A-201ENST00000216211 LASP1Q14847 261 aaKnown RBP13.42□□□□□ -0.26
UPK3A-201ENST00000216211 ARL13AQ5H913 290 aaPredicted RBP13.42□□□□□ -0.26
UPK3A-201ENST00000216211 EXOSC6Q5RKV6 272 aaKnown RBP13.42□□□□□ -0.26
UPK3A-201ENST00000216211 HBMQ6B0K9 141 aa13.42□□□□□ -0.26
UPK3A-201ENST00000216211 LRRC75A-AS1Q8N1F1 130 aa13.42□□□□□ -0.26
UPK3A-201ENST00000216211 OR2V1Q8NHB1 315 aa13.42□□□□□ -0.26
UPK3A-201ENST00000216211 B4GALNT2Q8NHY0 566 aa13.42□□□□□ -0.26
UPK3A-201ENST00000216211 ACTRT2Q8TDY3 377 aa13.42□□□□□ -0.26
UPK3A-201ENST00000216211 NUDT8Q8WV74 236 aa13.42□□□□□ -0.26
UPK3A-201ENST00000216211 CDS1Q92903 461 aa13.42□□□□□ -0.26
UPK3A-201ENST00000216211 LRRC37BQ96QE4 947 aa13.42□□□□□ -0.26
UPK3A-201ENST00000216211 C1orf50Q9BV19 199 aa13.42□□□□□ -0.26
UPK3A-201ENST00000216211 HHATLQ9HCP6 504 aa13.42□□□□□ -0.26
UPK3A-201ENST00000216211 PNPOQ9NVS9 261 aa13.42□□□□□ -0.26
UPK3A-201ENST00000216211 PAQR5Q9NXK6 330 aaPredicted RBP13.42□□□□□ -0.26
UPK3A-201ENST00000216211 GIN1Q9NXP7 522 aa13.42□□□□□ -0.26
UPK3A-201ENST00000216211 ATP6V1HQ9UI12 483 aa13.42□□□□□ -0.26
UPK3A-201ENST00000216211 RRP15Q9Y3B9 282 aaKnown RBP13.42□□□□□ -0.26
UPK3A-201ENST00000216211 SNX8Q9Y5X2 465 aa13.42□□□□□ -0.26
UPK3A-201ENST00000216211 NSD1Q96L73 2696 aaPredicted RBP13.42□□□□□ -0.26
UPK3A-201ENST00000216211 PRR14LQ5THK1 2151 aa13.41□□□□□ -0.26
UPK3A-201ENST00000216211 NPIPA5A0A0B4J1W7 369 aa13.41□□□□□ -0.26
UPK3A-201ENST00000216211 A0A1W2PQD3 144 aa13.41□□□□□ -0.26
UPK3A-201ENST00000216211 NPIPA7E9PJI5 369 aa13.41□□□□□ -0.26
UPK3A-201ENST00000216211 ZNF195O14628 629 aa13.41□□□□□ -0.26
UPK3A-201ENST00000216211 ADAMDEC1O15204 470 aa13.41□□□□□ -0.26
UPK3A-201ENST00000216211 UBOX5O94941 541 aa13.41□□□□□ -0.26
UPK3A-201ENST00000216211 NPIPA8P0DM63 369 aa13.41□□□□□ -0.26
UPK3A-201ENST00000216211 LAMP1P11279 417 aa13.41□□□□□ -0.26
UPK3A-201ENST00000216211 FPR1P21462 350 aa13.41□□□□□ -0.26
UPK3A-201ENST00000216211 ME2P23368 584 aa13.41□□□□□ -0.26
UPK3A-201ENST00000216211 AQP5P55064 265 aa13.41□□□□□ -0.26
UPK3A-201ENST00000216211 BNIP1Q12981 228 aa13.41□□□□□ -0.26
UPK3A-201ENST00000216211 MLC1Q15049 377 aa13.41□□□□□ -0.26
UPK3A-201ENST00000216211 CLEC9AQ6UXN8 241 aa13.41□□□□□ -0.26
UPK3A-201ENST00000216211 STAC2Q6ZMT1 411 aa13.41□□□□□ -0.26
UPK3A-201ENST00000216211 ESPNLQ6ZVH7 1005 aa13.41□□□□□ -0.26
UPK3A-201ENST00000216211 MISPQ8IVT2 679 aa13.41□□□□□ -0.26
UPK3A-201ENST00000216211 STON2Q8WXE9 905 aa13.41□□□□□ -0.26
UPK3A-201ENST00000216211 PPP3R2Q96LZ3 170 aa13.41□□□□□ -0.26
UPK3A-201ENST00000216211 BTBD2Q9BX70 525 aa13.41□□□□□ -0.26
UPK3A-201ENST00000216211 PIGUQ9H490 435 aa13.41□□□□□ -0.26
UPK3A-201ENST00000216211 EML4Q9HC35 981 aaKnown RBP13.41□□□□□ -0.26
UPK3A-201ENST00000216211 FREM1Q5H8C1 2179 aa13.41□□□□□ -0.26
UPK3A-201ENST00000216211 SLCO1B7G3V0H7 640 aa13.4□□□□□ -0.26
UPK3A-201ENST00000216211 OIP5O43482 229 aa13.4□□□□□ -0.26
UPK3A-201ENST00000216211 LINGO3P0C6S8 592 aa13.4□□□□□ -0.26
UPK3A-201ENST00000216211 KITP10721 976 aa13.4□□□□□ -0.26
UPK3A-201ENST00000216211 DDX5P17844 614 aaKnown RBP13.4□□□□□ -0.26
UPK3A-201ENST00000216211 MAPK1P28482 360 aa13.4□□□□□ -0.26
UPK3A-201ENST00000216211 SHC1P29353 583 aa13.4□□□□□ -0.26
UPK3A-201ENST00000216211 SFTPDP35247 375 aa13.4□□□□□ -0.26
UPK3A-201ENST00000216211 RPL14P50914 215 aaKnown RBP13.4□□□□□ -0.26
UPK3A-201ENST00000216211 ZNF117Q03924 483 aa13.4□□□□□ -0.26
UPK3A-201ENST00000216211 FOXF1Q12946 379 aa13.4□□□□□ -0.26
UPK3A-201ENST00000216211 TP53BP2Q13625 1128 aa13.4□□□□□ -0.26
UPK3A-201ENST00000216211 PTGR1Q14914 329 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms