RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 ZNF136P52737 540 aa13.03□□□□□ -0.32
USH1C-201ENST00000005226 ACSM3Q53FZ2 586 aa13.03□□□□□ -0.32
USH1C-201ENST00000005226 SFRP4Q6FHJ7 346 aaPredicted RBP13.03□□□□□ -0.32
USH1C-201ENST00000005226 CDC73Q6P1J9 531 aa13.03□□□□□ -0.32
USH1C-201ENST00000005226 ANKRD33Q7Z3H0 272 aa13.03□□□□□ -0.32
USH1C-201ENST00000005226 GLRX5Q86SX6 157 aa13.03□□□□□ -0.32
USH1C-201ENST00000005226 TMEFF1Q8IYR6 380 aa13.03□□□□□ -0.32
USH1C-201ENST00000005226 SFXN5Q8TD22 340 aa13.03□□□□□ -0.32
USH1C-201ENST00000005226 THAP4Q8WY91 577 aa13.03□□□□□ -0.32
USH1C-201ENST00000005226 PEX11GQ96HA9 241 aa13.03□□□□□ -0.32
USH1C-201ENST00000005226 TEAD3Q99594 435 aa13.03□□□□□ -0.32
USH1C-201ENST00000005226 DHRS9Q9BPW9 319 aa13.03□□□□□ -0.32
USH1C-201ENST00000005226 WDR45Q9Y484 360 aa13.03□□□□□ -0.32
USH1C-201ENST00000005226 ATG2BQ96BY7 2078 aa13.03□□□□□ -0.32
USH1C-201ENST00000005226 MPC2O95563 127 aa13.03□□□□□ -0.32
USH1C-201ENST00000005226 CFDP00746 253 aaPredicted RBP13.03□□□□□ -0.32
USH1C-201ENST00000005226 RAF1P04049 648 aa13.03□□□□□ -0.32
USH1C-201ENST00000005226 ASGR2P07307 311 aa13.03□□□□□ -0.32
USH1C-201ENST00000005226 ATF1P18846 271 aa13.03□□□□□ -0.32
USH1C-201ENST00000005226 ZNF81P51508 661 aa13.03□□□□□ -0.32
USH1C-201ENST00000005226 SIM1P81133 766 aaPredicted RBP13.03□□□□□ -0.32
USH1C-201ENST00000005226 CRYZQ08257 329 aaKnown RBP13.03□□□□□ -0.32
USH1C-201ENST00000005226 DUSP5Q16690 384 aa13.03□□□□□ -0.32
USH1C-201ENST00000005226 PRPF38BQ5VTL8 546 aaKnown RBP13.03□□□□□ -0.32
USH1C-201ENST00000005226 SPRED2Q7Z698 418 aa13.03□□□□□ -0.32
USH1C-201ENST00000005226 TMIEQ8NEW7 156 aa13.03□□□□□ -0.32
USH1C-201ENST00000005226 CEP76Q8TAP6 659 aa13.03□□□□□ -0.32
USH1C-201ENST00000005226 TTC9Q92623 222 aa13.03□□□□□ -0.32
USH1C-201ENST00000005226 GHSRQ92847 366 aa13.03□□□□□ -0.32
USH1C-201ENST00000005226 YIPF5Q969M3 257 aa13.03□□□□□ -0.32
USH1C-201ENST00000005226 ZNF764Q96H86 408 aaPredicted RBP13.03□□□□□ -0.32
USH1C-201ENST00000005226 ACTRT3Q9BYD9 372 aa13.03□□□□□ -0.32
USH1C-201ENST00000005226 CAPN10Q9HC96 672 aa13.03□□□□□ -0.32
USH1C-201ENST00000005226 TRIM36Q9NQ86 728 aa13.03□□□□□ -0.32
USH1C-201ENST00000005226 USP36Q9P275 1121 aaKnown RBP13.03□□□□□ -0.32
USH1C-201ENST00000005226 INSL6Q9Y581 213 aa13.03□□□□□ -0.32
USH1C-201ENST00000005226 ZNF780BQ9Y6R6 833 aa13.03□□□□□ -0.32
USH1C-201ENST00000005226 C7orf66A4D0T2 115 aa13.02□□□□□ -0.32
USH1C-201ENST00000005226 PEX12O00623 359 aa13.02□□□□□ -0.32
USH1C-201ENST00000005226 PDGFAP04085 211 aa13.02□□□□□ -0.32
USH1C-201ENST00000005226 HRGP04196 525 aa13.02□□□□□ -0.32
USH1C-201ENST00000005226 WNT1P04628 370 aa13.02□□□□□ -0.32
USH1C-201ENST00000005226 ADRB1P08588 477 aa13.02□□□□□ -0.32
USH1C-201ENST00000005226 RBMS1P29558 406 aaKnown RBP13.02□□□□□ -0.32
USH1C-201ENST00000005226 PRKAR1BP31321 381 aa13.02□□□□□ -0.32
USH1C-201ENST00000005226 RAB28P51157 221 aa13.02□□□□□ -0.32
USH1C-201ENST00000005226 ZNF85Q03923 595 aa13.02□□□□□ -0.32
USH1C-201ENST00000005226 GALEQ14376 348 aa13.02□□□□□ -0.32
USH1C-201ENST00000005226 ELAVL3Q14576 367 aaKnown RBP13.02□□□□□ -0.32
USH1C-201ENST00000005226 TMEM52BQ4KMG9 183 aa13.02□□□□□ -0.32
USH1C-201ENST00000005226 TP53I3Q53FA7 332 aa13.02□□□□□ -0.32
USH1C-201ENST00000005226 OR2L5Q8NG80 312 aa13.02□□□□□ -0.32
USH1C-201ENST00000005226 OR52E1Q8NGJ3 308 aa13.02□□□□□ -0.32
USH1C-201ENST00000005226 HMGB4Q8WW32 186 aa13.02□□□□□ -0.32
USH1C-201ENST00000005226 C1QTNF2Q9BXJ5 285 aa13.02□□□□□ -0.32
USH1C-201ENST00000005226 AUNIPQ9H7T9 357 aa13.02□□□□□ -0.32
USH1C-201ENST00000005226 MED17Q9NVC6 651 aa13.02□□□□□ -0.32
USH1C-201ENST00000005226 AK6Q9Y3D8 172 aaKnown RBP13.02□□□□□ -0.32
USH1C-201ENST00000005226 TRBV23OR9-2A0A075B6M9 112 aa13.02□□□□□ -0.33
USH1C-201ENST00000005226 BHLHE40O14503 412 aa13.02□□□□□ -0.33
USH1C-201ENST00000005226 GAAP10253 952 aa13.02□□□□□ -0.33
USH1C-201ENST00000005226 ANXA3P12429 323 aa13.02□□□□□ -0.33
USH1C-201ENST00000005226 PEBP1P30086 187 aaKnown RBP13.02□□□□□ -0.33
USH1C-201ENST00000005226 PPM1AP35813 382 aa13.02□□□□□ -0.33
USH1C-201ENST00000005226 HSD17B2P37059 387 aa13.02□□□□□ -0.33
USH1C-201ENST00000005226 MAGEB1P43366 347 aa13.02□□□□□ -0.33
USH1C-201ENST00000005226 ERVK-21P61565 698 aa13.02□□□□□ -0.33
USH1C-201ENST00000005226 FOXK2Q01167 660 aa13.02□□□□□ -0.33
USH1C-201ENST00000005226 PIAS4Q8N2W9 510 aaPredicted RBP13.02□□□□□ -0.33
USH1C-201ENST00000005226 GIMAP1Q8WWP7 306 aa13.02□□□□□ -0.33
USH1C-201ENST00000005226 HHIPL1Q96JK4 782 aa13.02□□□□□ -0.33
USH1C-201ENST00000005226 HS6ST2Q96MM7 605 aa13.02□□□□□ -0.33
USH1C-201ENST00000005226 CHIAQ9BZP6 476 aa13.02□□□□□ -0.33
USH1C-201ENST00000005226 BRD7Q9NPI1 651 aa13.02□□□□□ -0.33
USH1C-201ENST00000005226 CLDND1Q9NY35 253 aa13.02□□□□□ -0.33
USH1C-201ENST00000005226 EIF3KQ9UBQ5 218 aaKnown RBP13.02□□□□□ -0.33
USH1C-201ENST00000005226 EDDM13A0A1B0GTR0 161 aa13.01□□□□□ -0.33
USH1C-201ENST00000005226 A8MUA0 341 aa13.01□□□□□ -0.33
USH1C-201ENST00000005226 SSNA1O43805 119 aa13.01□□□□□ -0.33
USH1C-201ENST00000005226 OR5F1O95221 314 aa13.01□□□□□ -0.33
USH1C-201ENST00000005226 NFATC1O95644 943 aa13.01□□□□□ -0.33
USH1C-201ENST00000005226 MT-ND5P03915 603 aa13.01□□□□□ -0.33
USH1C-201ENST00000005226 BMP7P18075 431 aa13.01□□□□□ -0.33
USH1C-201ENST00000005226 F8A1P23610 371 aa13.01□□□□□ -0.33
USH1C-201ENST00000005226 CRMP1Q14194 572 aa13.01□□□□□ -0.33
USH1C-201ENST00000005226 ZNF267Q14586 743 aaPredicted RBP13.01□□□□□ -0.33
USH1C-201ENST00000005226 TMEM35AQ53FP2 167 aa13.01□□□□□ -0.33
USH1C-201ENST00000005226 TRMT12Q53H54 448 aaKnown RBP13.01□□□□□ -0.33
USH1C-201ENST00000005226 PYHIN1Q6K0P9 492 aa13.01□□□□□ -0.33
USH1C-201ENST00000005226 MFSD12Q6NUT3 480 aa13.01□□□□□ -0.33
USH1C-201ENST00000005226 ADAMTSL4Q6UY14 1074 aa13.01□□□□□ -0.33
USH1C-201ENST00000005226 ADGRD2Q7Z7M1 963 aa13.01□□□□□ -0.33
USH1C-201ENST00000005226 OR51Q1Q8NH59 317 aa13.01□□□□□ -0.33
USH1C-201ENST00000005226 LRRC20Q8TCA0 184 aa13.01□□□□□ -0.33
USH1C-201ENST00000005226 AHCYL2Q96HN2 611 aaKnown RBP13.01□□□□□ -0.33
USH1C-201ENST00000005226 CD180Q99467 661 aa13.01□□□□□ -0.33
USH1C-201ENST00000005226 NDC1Q9BTX1 674 aa13.01□□□□□ -0.33
USH1C-201ENST00000005226 C1QTNF6Q9BXI9 259 aa13.01□□□□□ -0.33
USH1C-201ENST00000005226 ERVMER34-1Q9H9K5 563 aa13.01□□□□□ -0.33
USH1C-201ENST00000005226 PRR23D1E9PI22 279 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms