RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Ccdc86Q9JJ89 426 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Dpy19l1A6X919 746 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Kcng2F7A6P6 480 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Znf354cQ571J5 560 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Ubr7Q8BU04 425 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Olfr450Q8VF81 310 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Olfr820Q8VFU5 312 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Serinc1Q9QZI8 453 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Map2k5Q9WVS7 448 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 NalcnQ8BXR5 1738 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Ccbe1Q3MI99 408 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Bdkrb1Q61125 334 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Dnajc27Q8CFP6 273 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Vmn1r188Q8K3N2 308 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Ak6Q8VCP8 172 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Il36bQ9D6Z6 183 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Peak1Q69Z38 1735 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Vmn2r103E9PWW0 856 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 AhrP30561 848 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 PtprrQ62132 656 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Fjx1Q8BQB4 450 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 H1fntQ8CJI4 398 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Lrrc66Q8K0B3 872 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 LctlQ8K1F9 566 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Tmem239Q9DA47 151 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Hnf4gQ9WUU6 408 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Gm3604A0A087WPN2 559 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Olfr723E9PZU2 309 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Slc6a11P31650 627 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Cyp3a16Q64481 504 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 GkQ64516 559 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Cr1lQ64735 483 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Vmn1r76F8VQ63 324 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Gm2056J3QQ02 144 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Gm8024L7N2E0 100 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Hoxd12P23812 268 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Anxa7Q07076 463 aaKnown RBP13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Olfr463Q5SW49 311 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Olfr462Q5SW50 311 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Ca7Q9ERQ8 264 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Scn4aQ9ER60 1841 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Tp53bp1P70399 1969 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 4930402K13RikB1AW18 415 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Rarres1F6ZIS7 283 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Ccr5P51682 354 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Olfr629Q0VBH3 314 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Olfr464Q5SW48 313 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Gpr17Q6NS65 339 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Prickle2Q80Y24 845 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 PdhxQ8BKZ9 501 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Nmnat2Q8BNJ3 307 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Sumf2Q8BPG6 308 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Rnh1Q91VI7 456 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Dhrs1Q99L04 313 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Arpc5lQ9D898 153 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Herpud2Q9JJC9 404 aa13.24□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Heg1E9Q7X6 1337 aa13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Gm13124A2A752 406 aa13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Gm10717D3Z1I8 228 aa13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Acbd4E9Q289 327 aa13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Pdlim1O70400 327 aa13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Dok2O70469 412 aa13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 SparcP07214 302 aa13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 LplP11152 474 aa13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Klhdc9Q3USL1 350 aa13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 OmgQ63912 440 aa13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Zfp157Q6PCM4 567 aa13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Olfr116Q923Q6 321 aa13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 S100a10P08207 97 aa13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Gstm2P15626 218 aa13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Gdf5P43027 495 aa13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Rps24P62849 133 aaKnown RBP13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Ermp1Q3UVK0 898 aaKnown RBP13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Sema6dQ76KF0 1073 aa13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 IpmkQ7TT16 396 aa13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Ndufb10Q9DCS9 176 aa13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Dock11A2AF47 2073 aa13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Dlx5P70396 289 aa13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Foxj1Q61660 421 aa13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Tas2r120Q7M721 295 aa13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 AardQ811W1 167 aa13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Lrfn5Q8BXA0 719 aa13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Kctd12bQ8C7J6 292 aa13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Coro6Q920M5 471 aa13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Zdhhc4Q9D6H5 343 aa13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Olfr948Q9EQ95 321 aa13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Kntc1Q8C3Y4 2207 aa13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Acp4D3YTS9 425 aa13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Bmi1P25916 324 aa13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Zic2Q62520 530 aa13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Cldn17Q8BXA6 224 aa13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Plcxd1Q8CHS4 345 aa13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Olfr53Q8VGL8 312 aa13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Papd4Q91YI6 484 aa13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Ndufa9Q9DC69 377 aaKnown RBP13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Alox8O35936 677 aa13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Shc4Q6S5L9 626 aa13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Vmn1r222Q8R269 308 aa13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Fam69bQ99ML4 431 aa13.23□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Rnf111Q99ML9 989 aa13.23□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 45 ms