RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 4933421I07RikQ9D420 214 aa15.77■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Pycr3Q9DCC4 274 aa15.77■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Dnajb8Q9QYI7 227 aa15.77■□□□□ 0.11
Ctcf-201ENSMUST00000005841 PvrigA0A1B0GS01 234 aa15.76■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Sp3O70494 783 aa15.76■□□□□ 0.11
Ctcf-201ENSMUST00000005841 D17Wsu92eQ3TT38 291 aa15.76■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Cfap52Q5F201 620 aa15.76■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Zfp82Q6P9Y7 530 aa15.76■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Olfr855Q7TRF8 312 aa15.76■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Scmh1Q8K214 706 aa15.76■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Agpat5Q9D1E8 365 aa15.76■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Isyna1Q9JHU9 557 aa15.76■□□□□ 0.11
Ctcf-201ENSMUST00000005841 PrepQ9QUR6 710 aa15.76■□□□□ 0.11
Ctcf-201ENSMUST00000005841 FaimQ9WUD8 179 aa15.76■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Dnah12Q3V0Q1 3086 aa15.76■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Gm28710A0A1B0GR31 962 aa15.76■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Prr32A2AFE9 284 aa15.76■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Nthl1O35980 300 aa15.76■□□□□ 0.11
Ctcf-201ENSMUST00000005841 FaslgP41047 279 aa15.76■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Gm14226Q3TZL0 686 aa15.76■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Mvb12bQ6KAU4 317 aa15.76■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Sgpp2Q810K3 354 aa15.76■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Oscp1Q8BHW2 379 aa15.76■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Mab21l2Q8BPP1 359 aa15.76■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Esrp2Q8K0G8 717 aaKnown RBP15.76■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Olfr164Q8VF87 315 aa15.76■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Pcdhb19Q91Y01 801 aa15.76■□□□□ 0.11
Ctcf-201ENSMUST00000005841 TardbpQ921F2 414 aaKnown RBP15.76■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Tpra1Q99MU1 369 aa15.76■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Erp27Q9D8U3 272 aa15.76■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Gm5141A0A0J9YUW3 581 aa15.76■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Olfr1348F6VB59 318 aa15.76■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Galnt9G3X942 604 aa15.76■□□□□ 0.11
Ctcf-201ENSMUST00000005841 H2-T3P14432 384 aa15.76■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Lsp1P19973 330 aa15.76■□□□□ 0.11
Ctcf-201ENSMUST00000005841 EvlP70429 414 aa15.76■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Arhgef4Q7TNR9 484 aa15.76■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Pars2Q8CFI5 475 aa15.76■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Adam4Q8CGQ2 763 aa15.76■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Sidt2Q8CIF6 832 aa15.76■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Ntng1Q8R4G0 539 aa15.76■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Fmo4Q8VHG0 560 aa15.76■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Rnf32Q9JIT1 368 aa15.76■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Gm5475D3YV11 175 aa15.75■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Vmn2r113E9PZA6 856 aa15.75■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Vmn2r105E9Q3A5 860 aa15.75■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Gm609E9Q573 300 aa15.75■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Cyp2c68K7N6C2 491 aa15.75■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Olfr209L7N1X3 305 aa15.75■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Cyp2c40P56657 491 aa15.75■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Rps11P62281 158 aaKnown RBP15.75■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Tcf7Q00417 419 aa15.75■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Atf7ip2Q3UL97 452 aa15.75■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Nr0b2Q62227 260 aa15.75■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Vmn1r59Q8R2B9 310 aa15.75■□□□□ 0.11
Ctcf-201ENSMUST00000005841 TrabdQ99JY4 376 aa15.75■□□□□ 0.11
Ctcf-201ENSMUST00000005841 4930447A16RikQ9D5F6 132 aa15.75■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Pebp4Q9D9G2 242 aa15.75■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Sertad3Q9ERC3 197 aa15.75■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Cnot9Q9JKY0 299 aa15.75■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Olfr1055A2AVX9 346 aa15.75■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Cd209fD3Z1H5 274 aa15.75■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Gm11239E9Q5Z9 360 aa15.75■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Gm11237F2Z3W5 360 aa15.75■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Gm11238F2Z478 360 aa15.75■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Zfp616J3QN14 987 aa15.75■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Gstm6O35660 218 aa15.75■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Emp1P47801 160 aa15.75■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Gm428Q3UTE2 360 aa15.75■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Gm11487Q5RIS0 354 aa15.75■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Slc35e4Q8K3D6 351 aa15.75■□□□□ 0.11
Ctcf-201ENSMUST00000005841 ScgnQ91WD9 276 aa15.75■□□□□ 0.11
Ctcf-201ENSMUST00000005841 MtfmtQ9D799 386 aa15.75■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Map2k5Q9WVS7 448 aa15.75■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Ndor1A2AI05 598 aa15.75■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Zfp934K7N6H3 473 aa15.75■□□□□ 0.11
Ctcf-201ENSMUST00000005841 RinlQ80UW3 563 aa15.75■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Sall4Q8BX22 1067 aa15.75■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Lrrtm3Q8BZ81 582 aa15.75■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Ccdc115Q8VE99 180 aaKnown RBP15.75■□□□□ 0.11
Ctcf-201ENSMUST00000005841 PnpoQ91XF0 261 aa15.75■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Uchl1Q9R0P9 223 aa15.75■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Nup214Q80U93 2085 aa15.75■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Esp22A8R0V4 111 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 P01648 108 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Fbln2P37889 1221 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Cdh11P55288 796 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Adamts8P57110 905 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Tnfrsf26P83626 204 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 AasdhQ80WC9 1100 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Klhl12Q8BZM0 568 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 GmdsQ8K0C9 372 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Defb35Q8R2I3 63 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Olfr689Q8VG18 320 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Uckl1Q91YL3 548 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Q9CQF4 240 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Lingo1Q9D1T0 614 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Pnp2Q9D8C9 305 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 SelenonD3Z2R5 557 aa15.74■□□□□ 0.11
Ctcf-201ENSMUST00000005841 GlsD3Z7P3 674 aa15.74■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 24.1 ms