RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	ATAD3B	Q5T9A4	648 aa		13.56	□□□□□ -0.24
PHGDH-231	ENST00000641939	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	13.56	□□□□□ -0.24
PHGDH-231	ENST00000641939	PLXDC2	Q6UX71	529 aa		13.56	□□□□□ -0.24
PHGDH-231	ENST00000641939	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	13.56	□□□□□ -0.24
PHGDH-231	ENST00000641939	ZNF614	Q8N883	585 aa		13.56	□□□□□ -0.24
PHGDH-231	ENST00000641939	XAGE5	Q8WWM1	108 aa		13.56	□□□□□ -0.24
PHGDH-231	ENST00000641939	ZBTB8A	Q96BR9	441 aa		13.56	□□□□□ -0.24
PHGDH-231	ENST00000641939	ACBD3	Q9H3P7	528 aa		13.56	□□□□□ -0.24
PHGDH-231	ENST00000641939	SLC24A3	Q9HC58	644 aa		13.56	□□□□□ -0.24
PHGDH-231	ENST00000641939	SDR39U1	Q9NRG7	319 aa	Predicted RBP	13.56	□□□□□ -0.24
PHGDH-231	ENST00000641939	INTS9	Q9NV88	658 aa	Known RBP	13.56	□□□□□ -0.24
PHGDH-231	ENST00000641939	ZIM2	Q9NZV7	527 aa		13.56	□□□□□ -0.24
PHGDH-231	ENST00000641939	C7orf72	A4D263	438 aa		13.55	□□□□□ -0.24
PHGDH-231	ENST00000641939	SLC22A20	A6NK97	555 aa		13.55	□□□□□ -0.24
PHGDH-231	ENST00000641939		H0YC42	278 aa		13.55	□□□□□ -0.24
PHGDH-231	ENST00000641939	GTPBP1	O00178	669 aa	Known RBP	13.55	□□□□□ -0.24
PHGDH-231	ENST00000641939	TNFRSF21	O75509	655 aa		13.55	□□□□□ -0.24
PHGDH-231	ENST00000641939	TGDS	O95455	350 aa		13.55	□□□□□ -0.24
PHGDH-231	ENST00000641939	TGM6	O95932	706 aa		13.55	□□□□□ -0.24
PHGDH-231	ENST00000641939	KHK	P50053	298 aa		13.55	□□□□□ -0.24
PHGDH-231	ENST00000641939	RNF144A	P50876	292 aa	Predicted RBP	13.55	□□□□□ -0.24
PHGDH-231	ENST00000641939	AGFG1	P52594	562 aa	Known RBP	13.55	□□□□□ -0.24
PHGDH-231	ENST00000641939	TPD52	P55327	224 aa	Predicted RBP	13.55	□□□□□ -0.24
PHGDH-231	ENST00000641939	DLX5	P56178	289 aa		13.55	□□□□□ -0.24
PHGDH-231	ENST00000641939	FOXF2	Q12947	444 aa		13.55	□□□□□ -0.24
PHGDH-231	ENST00000641939	GPR68	Q15743	365 aa		13.55	□□□□□ -0.24
PHGDH-231	ENST00000641939	FBXL19-AS1	Q494R0	122 aa		13.55	□□□□□ -0.24
PHGDH-231	ENST00000641939	HEPHL1	Q6MZM0	1159 aa		13.55	□□□□□ -0.24
PHGDH-231	ENST00000641939	P4HA3	Q7Z4N8	544 aa		13.55	□□□□□ -0.24
PHGDH-231	ENST00000641939	SMPDL3B	Q92485	455 aa		13.55	□□□□□ -0.24
PHGDH-231	ENST00000641939	RAB8B	Q92930	207 aa		13.55	□□□□□ -0.24
PHGDH-231	ENST00000641939	INTS12	Q96CB8	462 aa	Known RBP	13.55	□□□□□ -0.24
PHGDH-231	ENST00000641939	RNF145	Q96MT1	663 aa		13.55	□□□□□ -0.24
PHGDH-231	ENST00000641939	KLHDC3	Q9BQ90	382 aa		13.55	□□□□□ -0.24
PHGDH-231	ENST00000641939	INPP5K	Q9BT40	448 aa		13.55	□□□□□ -0.24
PHGDH-231	ENST00000641939	SFXN3	Q9BWM7	321 aa		13.55	□□□□□ -0.24
PHGDH-231	ENST00000641939	ZNF350	Q9GZX5	532 aa		13.55	□□□□□ -0.24
PHGDH-231	ENST00000641939	MKLN1	Q9UL63	735 aa		13.55	□□□□□ -0.24
PHGDH-231	ENST00000641939	CARD8	Q9Y2G2	431 aa		13.55	□□□□□ -0.24
PHGDH-231	ENST00000641939	CCDC168	Q8NDH2	2452 aa		13.55	□□□□□ -0.24
PHGDH-231	ENST00000641939	POLR3G	O15318	223 aa	Predicted RBP	13.54	□□□□□ -0.24
PHGDH-231	ENST00000641939	OIP5	O43482	229 aa		13.54	□□□□□ -0.24
PHGDH-231	ENST00000641939	FCMR	O60667	390 aa		13.54	□□□□□ -0.24
PHGDH-231	ENST00000641939	NUDT14	O95848	222 aa		13.54	□□□□□ -0.24
PHGDH-231	ENST00000641939	GUSB	P08236	651 aa		13.54	□□□□□ -0.24
PHGDH-231	ENST00000641939	LINGO3	P0C6S8	592 aa		13.54	□□□□□ -0.24
PHGDH-231	ENST00000641939	UQCRC1	P31930	480 aa		13.54	□□□□□ -0.24
PHGDH-231	ENST00000641939	EIF1	P41567	113 aa	Known RBP	13.54	□□□□□ -0.24
PHGDH-231	ENST00000641939	CDKN2C	P42773	168 aa		13.54	□□□□□ -0.24
PHGDH-231	ENST00000641939	P2RX1	P51575	399 aa		13.54	□□□□□ -0.24
PHGDH-231	ENST00000641939	POLR2J	P52435	117 aa	Known RBP	13.54	□□□□□ -0.24
PHGDH-231	ENST00000641939	SUMO3	P55854	103 aa	Predicted RBP	13.54	□□□□□ -0.24
PHGDH-231	ENST00000641939	RPS3A	P61247	264 aa	Known RBP	13.54	□□□□□ -0.24
PHGDH-231	ENST00000641939	TXNL4A	P83876	142 aa	Known RBP	13.54	□□□□□ -0.24
PHGDH-231	ENST00000641939	ZNF141	Q15928	474 aa		13.54	□□□□□ -0.24
PHGDH-231	ENST00000641939	PDZK1	Q5T2W1	519 aa		13.54	□□□□□ -0.24
PHGDH-231	ENST00000641939	CBLN3	Q6UW01	205 aa		13.54	□□□□□ -0.24
PHGDH-231	ENST00000641939	ZNF621	Q6ZSS3	439 aa		13.54	□□□□□ -0.24
PHGDH-231	ENST00000641939	RNF130	Q86XS8	419 aa		13.54	□□□□□ -0.24
PHGDH-231	ENST00000641939	GCNT2	Q8N0V5	402 aa		13.54	□□□□□ -0.24
PHGDH-231	ENST00000641939	MIER2	Q8N344	545 aa		13.54	□□□□□ -0.24
PHGDH-231	ENST00000641939	METTL25	Q8N6Q8	603 aa		13.54	□□□□□ -0.24
PHGDH-231	ENST00000641939	RNASE6	Q93091	150 aa	Known RBP	13.54	□□□□□ -0.24
PHGDH-231	ENST00000641939	NPAS1	Q99742	590 aa		13.54	□□□□□ -0.24
PHGDH-231	ENST00000641939	PINK1	Q9BXM7	581 aa		13.54	□□□□□ -0.24
PHGDH-231	ENST00000641939	TCF7L2	Q9NQB0	619 aa		13.54	□□□□□ -0.24
PHGDH-231	ENST00000641939	POLE3	Q9NRF9	147 aa		13.54	□□□□□ -0.24
PHGDH-231	ENST00000641939	KCNN3	Q9UGI6	736 aa		13.54	□□□□□ -0.24
PHGDH-231	ENST00000641939	FOXD3	Q9UJU5	478 aa	Predicted RBP	13.54	□□□□□ -0.24
PHGDH-231	ENST00000641939	ICAM5	Q9UMF0	924 aa		13.54	□□□□□ -0.24
PHGDH-231	ENST00000641939	ZNF175	Q9Y473	711 aa		13.54	□□□□□ -0.24
PHGDH-231	ENST00000641939	AKAP6	Q13023	2319 aa		13.54	□□□□□ -0.24
PHGDH-231	ENST00000641939	PDZD2	O15018	2839 aa		13.54	□□□□□ -0.24
PHGDH-231	ENST00000641939	ABCA4	P78363	2273 aa		13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	SERINC4	A6NH21	518 aa		13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	EEF1E1-BLOC1S5	C9J1V9	151 aa		13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	HMGN4	O00479	90 aa		13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	RFXANK	O14593	260 aa		13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	ZNF264	O43296	627 aa		13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	EEF1E1	O43324	174 aa	Known RBP	13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	KIAA0513	O60268	411 aa		13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	EIF4E2	O60573	245 aa	Known RBP	13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	UGT2B17	O75795	530 aa		13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	SASH3	O75995	380 aa		13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	C1QC	P02747	245 aa		13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	GSN	P06396	782 aa		13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	UBL4A	P11441	157 aa		13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	ME2	P23368	584 aa		13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	PSMA4	P25789	261 aa	Known RBP	13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	PEX19	P40855	299 aa		13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	ANXA11	P50995	505 aa	Known RBP	13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	RAC1	P63000	192 aa		13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	EEF1A1	P68104	462 aa	Known RBP	13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	TLE4	Q04727	773 aa		13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	FUT5	Q11128	374 aa		13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	EEF1A1P5	Q5VTE0	462 aa		13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	AP1AR	Q63HQ0	302 aa		13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	OR2A2	Q6IF42	318 aa		13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	MSANTD1	Q6ZTZ1	278 aa		13.53	□□□□□ -0.24
PHGDH-231	ENST00000641939	OLIG3	Q7RTU3	272 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms