RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 TRBV4-1A0A0J9YWV2 114 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 CENPVL1A0A0U1RR11 272 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 C2orf92A0A1B0GVN3 265 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 SYNDIG1LA6NDD5 238 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 EFCAB10A6NFE3 127 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 TMX2-CTNND1H3BSU7 103 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 M0R3G1 203 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 FAAHO00519 579 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 KPNA4O00629 521 aaPredicted RBP8.18□□□□□ -1.1
PHGDH-219ENST00000641513 FFAR1O14842 300 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 XPNPEP2O43895 674 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 OR10H3O60404 316 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 BRINP1O60477 761 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 CSO75390 466 aaKnown RBP8.18□□□□□ -1.1
PHGDH-219ENST00000641513 CYP7B1O75881 506 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 DDAH2O95865 285 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 EPPINO95925 133 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 IGKV1D-16P01601 117 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 CLPSP04118 112 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 CDK1P06493 297 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 JMJD7P0C870 316 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 CT45A8P0DMV1 189 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 CT45A9P0DMV2 189 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 POU2F1P14859 743 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 ZNF28P17035 718 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 FMO3P31513 532 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 CCKBRP32239 447 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 TGFBR2P37173 567 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 EFNA3P52797 238 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 CLDN6P56747 220 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 SLC37A1P57057 533 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 HOXC5Q00444 222 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 IRF3Q14653 427 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 SPCS2Q15005 226 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 CSRP2Q16527 193 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 MAPK14Q16539 360 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 DECR1Q16698 335 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 RGS21Q2M5E4 152 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 CT45A2Q5DJT8 189 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 TMEM201Q5SNT2 666 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 PDZK1Q5T2W1 519 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 MRPL2Q5T653 305 aaKnown RBP8.18□□□□□ -1.1
PHGDH-219ENST00000641513 DCAF12Q5T6F0 453 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 LCN10Q6JVE6 187 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 FAM199XQ6PEV8 388 aaPredicted RBP8.18□□□□□ -1.1
PHGDH-219ENST00000641513 DCDC5Q6ZRR9 648 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 ZNF367Q7RTV3 350 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 ANKRD37Q7Z713 158 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 ZAR1Q86SH2 424 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 RANBP3LQ86VV4 465 aaPredicted RBP8.18□□□□□ -1.1
PHGDH-219ENST00000641513 BMPERQ8N8U9 685 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 GALNT6Q8NCL4 622 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 MORN4Q8NDC4 146 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 ZNF721Q8TF20 911 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 SGCDQ92629 289 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 HOXB13Q92826 284 aaPredicted RBP8.18□□□□□ -1.1
PHGDH-219ENST00000641513 PMEPA1Q969W9 287 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 GTPBP3Q969Y2 492 aaKnown RBP8.18□□□□□ -1.1
PHGDH-219ENST00000641513 EFHD2Q96C19 240 aaPredicted RBP8.18□□□□□ -1.1
PHGDH-219ENST00000641513 SH3YL1Q96HL8 342 aaPredicted RBP8.18□□□□□ -1.1
PHGDH-219ENST00000641513 LCORQ96JN0 433 aaPredicted RBP8.18□□□□□ -1.1
PHGDH-219ENST00000641513 PRRC1Q96M27 445 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 CRB3Q9BUF7 120 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 CDCA4Q9BXL8 241 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 DGCR6LQ9BY27 220 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 MROQ9BYG7 248 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 SAP130Q9H0E3 1048 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.18□□□□□ -1.1
PHGDH-219ENST00000641513 FAM86C1Q9NVL1 165 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 PISDQ9UG56 409 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 MRTO4Q9UKD2 239 aaKnown RBP8.18□□□□□ -1.1
PHGDH-219ENST00000641513 ACAD8Q9UKU7 415 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 A4GNTQ9UNA3 340 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 RNF6Q9Y252 685 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 NTNG1Q9Y2I2 539 aa8.18□□□□□ -1.1
PHGDH-219ENST00000641513 PCNX3Q9H6A9 2034 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 IGLV3-12A0A075B6K2 115 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 TEX51A0A1B0GUA7 166 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 ISPDA4D126 451 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 FRG2CA6NGY1 282 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 SAGE2PA6NJ88 616 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 ZAR1LA6NP61 321 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 B4E171 279 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 PTGES3LE9PB15 166 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 TAF4O00268 1085 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 REM1O75628 298 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 GKN3PP0CG01 181 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 NID1P14543 1247 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 HPGDP15428 266 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 FUT4P22083 530 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 RPS4Y1P22090 263 aaKnown RBP8.17□□□□□ -1.1
PHGDH-219ENST00000641513 ELAVL4P26378 380 aaKnown RBP8.17□□□□□ -1.1
PHGDH-219ENST00000641513 IL12BP29460 328 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 CD40LGP29965 261 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 ETV5P41161 510 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 TSPAN7P41732 249 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 PPICP45877 212 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 NR0B1P51843 470 aaKnown RBP8.17□□□□□ -1.1
PHGDH-219ENST00000641513 LIMK1P53667 647 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 UGT2B15P54855 530 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms