RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 GPR176Q14439 515 aa13.58□□□□□ -0.24
SCARB2-221ENST00000640341 RPE65Q16518 533 aa13.58□□□□□ -0.24
SCARB2-221ENST00000640341 ZSWIM7Q19AV6 140 aa13.58□□□□□ -0.24
SCARB2-221ENST00000640341 GAB4Q2WGN9 574 aa13.58□□□□□ -0.24
SCARB2-221ENST00000640341 SLC25A30Q5SVS4 291 aa13.58□□□□□ -0.24
SCARB2-221ENST00000640341 MRPL2Q5T653 305 aaKnown RBP13.58□□□□□ -0.24
SCARB2-221ENST00000640341 RNLSQ5VYX0 342 aa13.58□□□□□ -0.24
SCARB2-221ENST00000640341 MFSD12Q6NUT3 480 aa13.58□□□□□ -0.24
SCARB2-221ENST00000640341 TMEM64Q6YI46 380 aa13.58□□□□□ -0.24
SCARB2-221ENST00000640341 FAM181AQ8N9Y4 354 aa13.58□□□□□ -0.24
SCARB2-221ENST00000640341 OR5W2Q8NH69 310 aa13.58□□□□□ -0.24
SCARB2-221ENST00000640341 SLC28A3Q9HAS3 691 aa13.58□□□□□ -0.24
SCARB2-221ENST00000640341 STARD5Q9NSY2 213 aa13.58□□□□□ -0.24
SCARB2-221ENST00000640341 SIDT1Q9NXL6 827 aaKnown RBP13.58□□□□□ -0.24
SCARB2-221ENST00000640341 ERVH48-1M5A8F1 160 aa13.58□□□□□ -0.24
SCARB2-221ENST00000640341 RGS9O75916 674 aaPredicted RBP13.58□□□□□ -0.24
SCARB2-221ENST00000640341 CEACAM5P06731 702 aa13.58□□□□□ -0.24
SCARB2-221ENST00000640341 PVRP15151 417 aa13.58□□□□□ -0.24
SCARB2-221ENST00000640341 GJA4P35212 333 aa13.58□□□□□ -0.24
SCARB2-221ENST00000640341 PPM1FP49593 454 aaPredicted RBP13.58□□□□□ -0.24
SCARB2-221ENST00000640341 NNATQ16517 81 aa13.58□□□□□ -0.24
SCARB2-221ENST00000640341 DUSP6Q16828 381 aa13.58□□□□□ -0.24
SCARB2-221ENST00000640341 SLC25A35Q3KQZ1 300 aa13.58□□□□□ -0.24
SCARB2-221ENST00000640341 YIF1BQ5BJH7 314 aa13.58□□□□□ -0.24
SCARB2-221ENST00000640341 PRSS41Q7RTY9 318 aa13.58□□□□□ -0.24
SCARB2-221ENST00000640341 AMIGO1Q86WK6 493 aa13.58□□□□□ -0.24
SCARB2-221ENST00000640341 GPR135Q8IZ08 494 aa13.58□□□□□ -0.24
SCARB2-221ENST00000640341 OR2L8Q8NGY9 312 aa13.58□□□□□ -0.24
SCARB2-221ENST00000640341 BADQ92934 168 aa13.58□□□□□ -0.24
SCARB2-221ENST00000640341 TSACCQ96A04 125 aaPredicted RBP13.58□□□□□ -0.24
SCARB2-221ENST00000640341 ARHGDIGQ99819 225 aa13.58□□□□□ -0.24
SCARB2-221ENST00000640341 SLX1AQ9BQ83 275 aa13.58□□□□□ -0.24
SCARB2-221ENST00000640341 KCNN2Q9H2S1 579 aa13.58□□□□□ -0.24
SCARB2-221ENST00000640341 CALML5Q9NZT1 146 aa13.58□□□□□ -0.24
SCARB2-221ENST00000640341 TBC1D29Q9UFV1 150 aa13.58□□□□□ -0.24
SCARB2-221ENST00000640341 CES1P1Q9UKY3 287 aa13.58□□□□□ -0.24
SCARB2-221ENST00000640341 CARNS1A5YM72 827 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 UNC119BA6NIH7 251 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 GRXCR1A8MXD5 290 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 CENPBD1B2RD01 187 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 PRR23D1E9PI22 279 aaPredicted RBP13.57□□□□□ -0.24
SCARB2-221ENST00000640341 HMGN1P05114 100 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 PRR23D2P0DMB1 279 aaPredicted RBP13.57□□□□□ -0.24
SCARB2-221ENST00000640341 POLR2CP19387 275 aaPredicted RBP13.57□□□□□ -0.24
SCARB2-221ENST00000640341 ERP29P30040 261 aaKnown RBP13.57□□□□□ -0.24
SCARB2-221ENST00000640341 NAA10P41227 235 aaPredicted RBP13.57□□□□□ -0.24
SCARB2-221ENST00000640341 ENPP7Q6UWV6 458 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 COX18Q8N8Q8 333 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 OR6C4Q8NGE1 309 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 DNAJA4Q8WW22 397 aaPredicted RBP13.57□□□□□ -0.24
SCARB2-221ENST00000640341 PIGKQ92643 395 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 RELTQ969Z4 430 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 PTCHD1Q96NR3 888 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 ASB16Q96NS5 453 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 MKRN2Q9H000 416 aaKnown RBP13.57□□□□□ -0.24
SCARB2-221ENST00000640341 GNG2P59768 71 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 RRAS2P62070 204 aaPredicted RBP13.57□□□□□ -0.24
SCARB2-221ENST00000640341 FCN2Q15485 313 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 GXYLT1Q4G148 440 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 OR4K14Q8NGD5 310 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 OR5T3Q8NGG3 340 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 SMARCD2Q92925 531 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 RFT1Q96AA3 541 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 KXD1Q9BQD3 176 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 SRMSQ9H3Y6 488 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 SLA2Q9H6Q3 261 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 TRIM36Q9NQ86 728 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 COL4A3Q01955 1670 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 POM121BA6NF01 834 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 FABP7O15540 132 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 TOXO94900 526 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 PPP1R3DO95685 299 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 SLC35G6P0C7Q6 338 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 ACTR1BP42025 376 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 GZMKP49863 264 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 ACTR1AP61163 376 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 MAB21L1Q13394 359 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 DECR1Q16698 335 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 TP53I3Q53FA7 332 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 MRM1Q6IN84 353 aaKnown RBP13.57□□□□□ -0.24
SCARB2-221ENST00000640341 RANBP3LQ86VV4 465 aaPredicted RBP13.57□□□□□ -0.24
SCARB2-221ENST00000640341 YAF2Q8IY57 180 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 ZNF485Q8NCK3 441 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 SRFBP1Q8NEF9 429 aaKnown RBP13.57□□□□□ -0.24
SCARB2-221ENST00000640341 GRPEL2Q8TAA5 225 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 TRMT10AQ8TBZ6 339 aaKnown RBP13.57□□□□□ -0.24
SCARB2-221ENST00000640341 SFXN5Q8TD22 340 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 TMEM239Q8WW34 195 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 GCDHQ92947 438 aaPredicted RBP13.57□□□□□ -0.24
SCARB2-221ENST00000640341 RAB7BQ96AH8 199 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 ZNF681Q96N22 645 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 HDAC8Q9BY41 377 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 MED28Q9H204 178 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 PCDHGB7Q9Y5F8 929 aa13.57□□□□□ -0.24
SCARB2-221ENST00000640341 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.56□□□□□ -0.24
SCARB2-221ENST00000640341 DUXAA6NLW8 204 aa13.56□□□□□ -0.24
SCARB2-221ENST00000640341 SYT5O00445 386 aa13.56□□□□□ -0.24
SCARB2-221ENST00000640341 ZNF780AO75290 641 aaPredicted RBP13.56□□□□□ -0.24
SCARB2-221ENST00000640341 HNRNPA1P09651 372 aaKnown RBP eCLIP13.56□□□□□ -0.24
SCARB2-221ENST00000640341 DRD5P21918 477 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms