RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 BOKQ9UMX3 212 aaPredicted RBP12.47□□□□□ -0.41
HLA-C-210ENST00000640219 MYRFQ9Y2G1 1151 aa12.47□□□□□ -0.41
HLA-C-210ENST00000640219 AP3M1Q9Y2T2 418 aa12.47□□□□□ -0.41
HLA-C-210ENST00000640219 PCDHA9Q9Y5H5 950 aa12.47□□□□□ -0.41
HLA-C-210ENST00000640219 GNG14A0A1W2PPG7 69 aa12.46□□□□□ -0.41
HLA-C-210ENST00000640219 CD8B2A6NJW9 211 aa12.46□□□□□ -0.41
HLA-C-210ENST00000640219 TP53P04637 393 aaPredicted RBP12.46□□□□□ -0.41
HLA-C-210ENST00000640219 CPMP14384 443 aa12.46□□□□□ -0.41
HLA-C-210ENST00000640219 PCSK2P16519 638 aa12.46□□□□□ -0.41
HLA-C-210ENST00000640219 ZNF26P17031 533 aaPredicted RBP12.46□□□□□ -0.41
HLA-C-210ENST00000640219 TIA1P31483 386 aaKnown RBP eCLIP12.46□□□□□ -0.41
HLA-C-210ENST00000640219 ARFIP1P53367 373 aa12.46□□□□□ -0.41
HLA-C-210ENST00000640219 SLC37A1P57057 533 aa12.46□□□□□ -0.41
HLA-C-210ENST00000640219 CRYZQ08257 329 aaKnown RBP12.46□□□□□ -0.41
HLA-C-210ENST00000640219 MAD2L1Q13257 205 aaPredicted RBP12.46□□□□□ -0.41
HLA-C-210ENST00000640219 INTS11Q5TA45 600 aaKnown RBP12.46□□□□□ -0.41
HLA-C-210ENST00000640219 DESI1Q6ICB0 168 aa12.46□□□□□ -0.41
HLA-C-210ENST00000640219 SLC48A1Q6P1K1 146 aa12.46□□□□□ -0.41
HLA-C-210ENST00000640219 PAGE2Q7Z2X7 111 aa12.46□□□□□ -0.41
HLA-C-210ENST00000640219 SLC15A3Q8IY34 581 aa12.46□□□□□ -0.41
HLA-C-210ENST00000640219 PM20D2Q8IYS1 436 aa12.46□□□□□ -0.41
HLA-C-210ENST00000640219 LRRC25Q8N386 305 aaPredicted RBP12.46□□□□□ -0.41
HLA-C-210ENST00000640219 OR4K14Q8NGD5 310 aa12.46□□□□□ -0.41
HLA-C-210ENST00000640219 C16orf78Q8WTQ4 265 aa12.46□□□□□ -0.41
HLA-C-210ENST00000640219 EXOSC8Q96B26 276 aaKnown RBP12.46□□□□□ -0.41
HLA-C-210ENST00000640219 CNRIP1Q96F85 164 aaPredicted RBP12.46□□□□□ -0.41
HLA-C-210ENST00000640219 PIK3IP1Q96FE7 263 aa12.46□□□□□ -0.41
HLA-C-210ENST00000640219 FBXL20Q96IG2 436 aa12.46□□□□□ -0.41
HLA-C-210ENST00000640219 PPP3R2Q96LZ3 170 aa12.46□□□□□ -0.41
HLA-C-210ENST00000640219 BRINP2Q9C0B6 783 aa12.46□□□□□ -0.41
HLA-C-210ENST00000640219 TUBB1Q9H4B7 451 aa12.46□□□□□ -0.41
HLA-C-210ENST00000640219 CXorf21Q9HAI6 301 aa12.46□□□□□ -0.41
HLA-C-210ENST00000640219 YAE1D1Q9NRH1 226 aa12.46□□□□□ -0.41
HLA-C-210ENST00000640219 QPCTLQ9NXS2 382 aa12.46□□□□□ -0.41
HLA-C-210ENST00000640219 UBAP1Q9NZ09 502 aa12.46□□□□□ -0.41
HLA-C-210ENST00000640219 AHSPQ9NZD4 102 aa12.46□□□□□ -0.41
HLA-C-210ENST00000640219 COPS7AQ9UBW8 275 aa12.46□□□□□ -0.41
HLA-C-210ENST00000640219 ADAM29Q9UKF5 820 aa12.46□□□□□ -0.41
HLA-C-210ENST00000640219 AURKCQ9UQB9 309 aa12.46□□□□□ -0.41
HLA-C-210ENST00000640219 CAMK2AQ9UQM7 478 aa12.46□□□□□ -0.41
HLA-C-210ENST00000640219 DLGAP4Q9Y2H0 992 aa12.46□□□□□ -0.41
HLA-C-210ENST00000640219 TESMINQ9Y4I5 508 aa12.46□□□□□ -0.41
HLA-C-210ENST00000640219 RNF103-CHMP3A0A140T963 221 aa12.45□□□□□ -0.42
HLA-C-210ENST00000640219 MBD3L3A6NE82 208 aaPredicted RBP12.45□□□□□ -0.42
HLA-C-210ENST00000640219 SLC28A1O00337 649 aa12.45□□□□□ -0.42
HLA-C-210ENST00000640219 NME4O00746 187 aa12.45□□□□□ -0.42
HLA-C-210ENST00000640219 SIAH2O43255 324 aa12.45□□□□□ -0.42
HLA-C-210ENST00000640219 TLX2O43763 284 aaPredicted RBP12.45□□□□□ -0.42
HLA-C-210ENST00000640219 TIPRLO75663 272 aa12.45□□□□□ -0.42
HLA-C-210ENST00000640219 SLC35E2P0CK97 266 aa12.45□□□□□ -0.42
HLA-C-210ENST00000640219 SMIM18P0DKX4 95 aa12.45□□□□□ -0.42
HLA-C-210ENST00000640219 TMIGD3P0DMS9 266 aaPredicted RBP12.45□□□□□ -0.42
HLA-C-210ENST00000640219 ESRRGP62508 458 aa12.45□□□□□ -0.42
HLA-C-210ENST00000640219 EMX2Q04743 252 aa12.45□□□□□ -0.42
HLA-C-210ENST00000640219 ACSM2AQ08AH3 577 aa12.45□□□□□ -0.42
HLA-C-210ENST00000640219 CAPRIN1Q14444 709 aaKnown RBP12.45□□□□□ -0.42
HLA-C-210ENST00000640219 EBPQ15125 230 aaKnown RBP12.45□□□□□ -0.42
HLA-C-210ENST00000640219 NRF1Q16656 503 aa12.45□□□□□ -0.42
HLA-C-210ENST00000640219 SMU1Q2TAY7 513 aa12.45□□□□□ -0.42
HLA-C-210ENST00000640219 KRTAP24-1Q3LI83 254 aa12.45□□□□□ -0.42
HLA-C-210ENST00000640219 CHRFAM7AQ494W8 412 aa12.45□□□□□ -0.42
HLA-C-210ENST00000640219 C6orf10Q5SRN2 563 aa12.45□□□□□ -0.42
HLA-C-210ENST00000640219 PRAMEF20Q5VT98 475 aa12.45□□□□□ -0.42
HLA-C-210ENST00000640219 SLC22A10Q63ZE4 541 aa12.45□□□□□ -0.42
HLA-C-210ENST00000640219 ACSM2BQ68CK6 577 aa12.45□□□□□ -0.42
HLA-C-210ENST00000640219 BICRALQ6AI39 1079 aa12.45□□□□□ -0.42
HLA-C-210ENST00000640219 LYPD8Q6UX82 237 aa12.45□□□□□ -0.42
HLA-C-210ENST00000640219 FKBP9P1Q75LS8 142 aa12.45□□□□□ -0.42
HLA-C-210ENST00000640219 AMIGO2Q86SJ2 522 aa12.45□□□□□ -0.42
HLA-C-210ENST00000640219 SATL1Q86VE3 508 aa12.45□□□□□ -0.42
HLA-C-210ENST00000640219 RETREG3Q86VR2 466 aa12.45□□□□□ -0.42
HLA-C-210ENST00000640219 GALNT12Q8IXK2 581 aa12.45□□□□□ -0.42
HLA-C-210ENST00000640219 ALDH16A1Q8IZ83 802 aa12.45□□□□□ -0.42
HLA-C-210ENST00000640219 MEIOBQ8N635 442 aa12.45□□□□□ -0.42
HLA-C-210ENST00000640219 FNDC5Q8NAU1 212 aa12.45□□□□□ -0.42
HLA-C-210ENST00000640219 TSPAN14Q8NG11 270 aa12.45□□□□□ -0.42
HLA-C-210ENST00000640219 CLHC1Q8NHS4 586 aa12.45□□□□□ -0.42
HLA-C-210ENST00000640219 MBD3L2Q8NHZ7 208 aaPredicted RBP12.45□□□□□ -0.42
HLA-C-210ENST00000640219 CANT1Q8WVQ1 401 aa12.45□□□□□ -0.42
HLA-C-210ENST00000640219 POP5Q969H6 163 aaKnown RBP12.45□□□□□ -0.42
HLA-C-210ENST00000640219 GFM2Q969S9 779 aaKnown RBP12.45□□□□□ -0.42
HLA-C-210ENST00000640219 SLCO4A1Q96BD0 722 aa12.45□□□□□ -0.42
HLA-C-210ENST00000640219 CENPNQ96H22 339 aaPredicted RBP12.45□□□□□ -0.42
HLA-C-210ENST00000640219 PRPF18Q99633 342 aaKnown RBP12.45□□□□□ -0.42
HLA-C-210ENST00000640219 WWTR1Q9GZV5 400 aa12.45□□□□□ -0.42
HLA-C-210ENST00000640219 CMTM6Q9NX76 183 aa12.45□□□□□ -0.42
HLA-C-210ENST00000640219 PTTG2Q9NZH5 202 aa12.45□□□□□ -0.42
HLA-C-210ENST00000640219 UTS2RQ9UKP6 389 aa12.45□□□□□ -0.42
HLA-C-210ENST00000640219 C1orf226A1L170 272 aa12.44□□□□□ -0.42
HLA-C-210ENST00000640219 LRRC3CA6NJW4 275 aa12.44□□□□□ -0.42
HLA-C-210ENST00000640219 DEFB108AA8MXU0 73 aa12.44□□□□□ -0.42
HLA-C-210ENST00000640219 RNF223E7ERA6 249 aa12.44□□□□□ -0.42
HLA-C-210ENST00000640219 RGS14O43566 566 aa12.44□□□□□ -0.42
HLA-C-210ENST00000640219 PGM3O95394 542 aa12.44□□□□□ -0.42
HLA-C-210ENST00000640219 H6PDO95479 791 aa12.44□□□□□ -0.42
HLA-C-210ENST00000640219 HSD3B1P14060 373 aa12.44□□□□□ -0.42
HLA-C-210ENST00000640219 S1PR1P21453 382 aa12.44□□□□□ -0.42
HLA-C-210ENST00000640219 SLC6A2P23975 617 aa12.44□□□□□ -0.42
HLA-C-210ENST00000640219 HSD3B2P26439 372 aa12.44□□□□□ -0.42
HLA-C-210ENST00000640219 MYBPC1Q00872 1141 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms