RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, human

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-222	ENST00000640072	RGS11	O94810	467 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	BRI3	O95415	125 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	BMP3	P12645	472 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	MYF5	P13349	255 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	CEACAM1	P13688	526 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	ACO1	P21399	889 aa	Known RBP	5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	FAM98C	Q17RN3	349 aa	Known RBP	5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	EXOC3L2	Q2M3D2	409 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	CBWD6	Q4V339	395 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	BAIAP2L2	Q6UXY1	529 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	C1orf127	Q8N9H9	656 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	HSD17B11	Q8NBQ5	300 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	DBF4B	Q8NFT6	615 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	OR2V1	Q8NHB1	315 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	SCAMP5	Q8TAC9	235 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	UBTD2	Q8WUN7	234 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	PKMYT1	Q99640	499 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	ARHGAP23	Q9P227	1491 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	LOC100130705	A0A1B0GUX0	176 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	PEX12	O00623	359 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	LEFTY1	O75610	366 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	RP2	O75695	350 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	B3GAT3	O94766	335 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	MPC2	O95563	127 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	GC	P02774	474 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	HTR1A	P08908	422 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	FGF2	P09038	288 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	PRKCH	P24723	683 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	SDHA	P31040	664 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	OTX2	P32243	289 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	DYNLT1	P63172	113 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	PITPNA	Q00169	270 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	HNRNPA0	Q13151	305 aa	Known RBP	5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	TMEM177	Q53S58	311 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	ARSJ	Q5FYB0	599 aa	Predicted RBP	5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	LCLAT1	Q6UWP7	414 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	DPY19L2P2	Q6ZN68	376 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	TMEM144	Q7Z5S9	345 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	ANGPTL5	Q86XS5	388 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	SKA3	Q8IX90	412 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	LMNTD1	Q8N9Z9	388 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	TTC16	Q8NEE8	873 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	OR2T4	Q8NH00	348 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	FAM110B	Q8TC76	370 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	RXFP4	Q8TDU9	374 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	SLC39A7	Q92504	469 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	DAZL	Q92904	295 aa	Known RBP	5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	ULK4	Q96C45	1275 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	ELMOD3	Q96FG2	381 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	ALKBH3	Q96Q83	286 aa	Predicted RBP	5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	NIPSNAP1	Q9BPW8	284 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	REG4	Q9BYZ8	158 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	AUNIP	Q9H7T9	357 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	UBE2T	Q9NPD8	197 aa	Predicted RBP	5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	SLC6A13	Q9NSD5	602 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	RBFOX1	Q9NWB1	397 aa	Known RBP	5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	GPR83	Q9NYM4	423 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	SERGEF	Q9UGK8	458 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	ICK	Q9UPZ9	632 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	PKP3	Q9Y446	797 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	ANKRD26	Q9UPS8	1709 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072		A0A1B0GVI7	797 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072		A0A1W2PPC4	97 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	CDRT15L2	A8MXV6	281 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072		H3BN98	237 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	GPR31	O00270	319 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	UBD	O15205	165 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	MSH4	O15457	936 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	LYRM1	O43325	122 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	CHST10	O43529	356 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	NARS	O43776	548 aa	Known RBP	5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	KIAA0513	O60268	411 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	SELENOF	O60613	162 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	IFNA5	P01569	189 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	F7	P08709	466 aa	Predicted RBP	5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	CELA3A	P09093	270 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	SPATA31C1	P0DKV0	1188 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	HIST1H2AD	P20671	130 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	ITPKA	P23677	461 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	S100A11	P31949	105 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	NOVA1	P51513	510 aa	Known RBP	5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	PPP3CA	Q08209	521 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	ZNF235	Q14590	738 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	LGALSL	Q3ZCW2	172 aa	Predicted RBP	5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	HIST2H2AA3	Q6FI13	130 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	ADCK2	Q7Z695	626 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	RNF113B	Q8IZP6	322 aa	Known RBP	5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	UBAC2	Q8NBM4	344 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	CLEC1A	Q8NC01	280 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	MAPK15	Q8TD08	544 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	HIST1H2AH	Q96KK5	128 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	DGAT2	Q96PD7	388 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	ACOX2	Q99424	681 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	STAC	Q99469	402 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	CMKLR1	Q99788	373 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	HIST1H2AJ	Q99878	128 aa		5.76	□□□□□ -1.49
NECAP1-222	ENST00000640072	SDCBP2	Q9H190	292 aa		5.76	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms