RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 MAN2C1Q9NTJ4 1040 aa14.12□□□□□ -0.15
CLN6-219ENST00000637329 POFUT2Q9Y2G5 429 aa14.12□□□□□ -0.15
CLN6-219ENST00000637329 KIF26BQ2KJY2 2108 aa14.12□□□□□ -0.15
CLN6-219ENST00000637329 DSPP15924 2871 aaKnown RBP14.11□□□□□ -0.15
CLN6-219ENST00000637329 NSG1A0A0A6YYJ2 146 aa14.11□□□□□ -0.15
CLN6-219ENST00000637329 SH3PXD2BA1X283 911 aa14.11□□□□□ -0.15
CLN6-219ENST00000637329 TRAPPC13A5PLN9 417 aa14.11□□□□□ -0.15
CLN6-219ENST00000637329 PRKNO60260 465 aaPredicted RBP14.11□□□□□ -0.15
CLN6-219ENST00000637329 TPST2O60704 377 aa14.11□□□□□ -0.15
CLN6-219ENST00000637329 REM1O75628 298 aa14.11□□□□□ -0.15
CLN6-219ENST00000637329 SNAP29O95721 258 aa14.11□□□□□ -0.15
CLN6-219ENST00000637329 UBL4AP11441 157 aa14.11□□□□□ -0.15
CLN6-219ENST00000637329 CBLP22681 906 aa14.11□□□□□ -0.15
CLN6-219ENST00000637329 DAPP51397 102 aa14.11□□□□□ -0.15
CLN6-219ENST00000637329 RPS6KA3P51812 740 aa14.11□□□□□ -0.15
CLN6-219ENST00000637329 LAPTM4AQ15012 233 aa14.11□□□□□ -0.15
CLN6-219ENST00000637329 BTBD16Q32M84 506 aa14.11□□□□□ -0.15
CLN6-219ENST00000637329 SWT1Q5T5J6 900 aaKnown RBP14.11□□□□□ -0.15
CLN6-219ENST00000637329 TTC23Q5W5X9 447 aa14.11□□□□□ -0.15
CLN6-219ENST00000637329 ZNF770Q6IQ21 691 aaPredicted RBP14.11□□□□□ -0.15
CLN6-219ENST00000637329 KIRREL2Q6UWL6 708 aa14.11□□□□□ -0.15
CLN6-219ENST00000637329 PPP1R32Q7Z5V6 425 aa14.11□□□□□ -0.15
CLN6-219ENST00000637329 MISPQ8IVT2 679 aa14.11□□□□□ -0.15
CLN6-219ENST00000637329 PARP8Q8N3A8 854 aa14.11□□□□□ -0.15
CLN6-219ENST00000637329 OR4C3Q8NH37 302 aa14.11□□□□□ -0.15
CLN6-219ENST00000637329 OR52J3Q8NH60 311 aa14.11□□□□□ -0.15
CLN6-219ENST00000637329 ADAMTS16Q8TE57 1224 aa14.11□□□□□ -0.15
CLN6-219ENST00000637329 CNOT9Q92600 299 aaKnown RBP14.11□□□□□ -0.15
CLN6-219ENST00000637329 SLC38A4Q969I6 547 aa14.11□□□□□ -0.15
CLN6-219ENST00000637329 SLC41A3Q96GZ6 507 aa14.11□□□□□ -0.15
CLN6-219ENST00000637329 ADOQ96SZ5 270 aa14.11□□□□□ -0.15
CLN6-219ENST00000637329 BARD1Q99728 777 aaKnown RBP14.11□□□□□ -0.15
CLN6-219ENST00000637329 GABARAPL3Q9BY60 117 aa14.11□□□□□ -0.15
CLN6-219ENST00000637329 TRIM2Q9C040 744 aa14.11□□□□□ -0.15
CLN6-219ENST00000637329 NRSN2Q9GZP1 204 aa14.11□□□□□ -0.15
CLN6-219ENST00000637329 TOR3AQ9H497 397 aa14.11□□□□□ -0.15
CLN6-219ENST00000637329 RHCGQ9UBD6 479 aa14.11□□□□□ -0.15
CLN6-219ENST00000637329 MGAT4BQ9UQ53 548 aa14.11□□□□□ -0.15
CLN6-219ENST00000637329 NPFFR2Q9Y5X5 522 aa14.11□□□□□ -0.15
CLN6-219ENST00000637329 GCN1Q92616 2671 aaKnown RBP14.1□□□□□ -0.15
CLN6-219ENST00000637329 TRBV4-1A0A0J9YWV2 114 aa14.1□□□□□ -0.15
CLN6-219ENST00000637329 TMEM200CA6NKL6 621 aa14.1□□□□□ -0.15
CLN6-219ENST00000637329 CPSF4LA6NMK7 179 aaKnown RBP14.1□□□□□ -0.15
CLN6-219ENST00000637329 CDRT15L2A8MXV6 281 aa14.1□□□□□ -0.15
CLN6-219ENST00000637329 ALG1L2C9J202 215 aa14.1□□□□□ -0.15
CLN6-219ENST00000637329 ICOSLGO75144 302 aa14.1□□□□□ -0.15
CLN6-219ENST00000637329 CYP7B1O75881 506 aa14.1□□□□□ -0.15
CLN6-219ENST00000637329 NADKO95544 446 aaPredicted RBP14.1□□□□□ -0.15
CLN6-219ENST00000637329 HPP00738 406 aa14.1□□□□□ -0.15
CLN6-219ENST00000637329 ICAM2P13598 275 aa14.1□□□□□ -0.15
CLN6-219ENST00000637329 PRKACGP22612 351 aa14.1□□□□□ -0.15
CLN6-219ENST00000637329 MYF6P23409 242 aa14.1□□□□□ -0.15
CLN6-219ENST00000637329 RBMS1P29558 406 aaKnown RBP14.1□□□□□ -0.15
CLN6-219ENST00000637329 IFNGR2P38484 337 aa14.1□□□□□ -0.15
CLN6-219ENST00000637329 UGT2B15P54855 530 aa14.1□□□□□ -0.15
CLN6-219ENST00000637329 ADARB1P78563 741 aaKnown RBP14.1□□□□□ -0.15
CLN6-219ENST00000637329 IL18R1Q13478 541 aa14.1□□□□□ -0.15
CLN6-219ENST00000637329 USP51Q70EK9 711 aa14.1□□□□□ -0.15
CLN6-219ENST00000637329 TMPRSS7Q7RTY8 843 aa14.1□□□□□ -0.15
CLN6-219ENST00000637329 TSPYL5Q86VY4 417 aaPredicted RBP14.1□□□□□ -0.15
CLN6-219ENST00000637329 RAB43Q86YS6 212 aa14.1□□□□□ -0.15
CLN6-219ENST00000637329 DND1Q8IYX4 353 aaKnown RBP14.1□□□□□ -0.15
CLN6-219ENST00000637329 PRR22Q8IZ63 422 aa14.1□□□□□ -0.15
CLN6-219ENST00000637329 ARMC10Q8N2F6 343 aa14.1□□□□□ -0.15
CLN6-219ENST00000637329 SLC5A8Q8N695 610 aa14.1□□□□□ -0.15
CLN6-219ENST00000637329 LSMEM1Q8N8F7 131 aa14.1□□□□□ -0.15
CLN6-219ENST00000637329 ZNF555Q8NEP9 628 aa14.1□□□□□ -0.15
CLN6-219ENST00000637329 SLC7A13Q8TCU3 470 aa14.1□□□□□ -0.15
CLN6-219ENST00000637329 CYGBQ8WWM9 190 aa14.1□□□□□ -0.15
CLN6-219ENST00000637329 IP6K3Q96PC2 410 aa14.1□□□□□ -0.15
CLN6-219ENST00000637329 MBOAT4Q96T53 435 aa14.1□□□□□ -0.15
CLN6-219ENST00000637329 FEVQ99581 238 aa14.1□□□□□ -0.15
CLN6-219ENST00000637329 SCNM1Q9BWG6 230 aa14.1□□□□□ -0.15
CLN6-219ENST00000637329 DGCR6LQ9BY27 220 aa14.1□□□□□ -0.15
CLN6-219ENST00000637329 DEFB126Q9BYW3 111 aa14.1□□□□□ -0.15
CLN6-219ENST00000637329 HHATLQ9HCP6 504 aa14.1□□□□□ -0.15
CLN6-219ENST00000637329 KRCC1Q9NPI7 259 aaPredicted RBP14.1□□□□□ -0.15
CLN6-219ENST00000637329 PAPOLBQ9NRJ5 636 aaKnown RBP14.1□□□□□ -0.15
CLN6-219ENST00000637329 MYOTQ9UBF9 498 aa14.1□□□□□ -0.15
CLN6-219ENST00000637329 SDK2Q58EX2 2172 aa14.09□□□□□ -0.15
CLN6-219ENST00000637329 CDC14CA4D256 554 aa14.09□□□□□ -0.15
CLN6-219ENST00000637329 SLC16A6O15403 523 aa14.09□□□□□ -0.15
CLN6-219ENST00000637329 DXOO77932 396 aaKnown RBP14.09□□□□□ -0.15
CLN6-219ENST00000637329 HTR2AP28223 471 aa14.09□□□□□ -0.15
CLN6-219ENST00000637329 DLSTP36957 453 aa14.09□□□□□ -0.15
CLN6-219ENST00000637329 SLC6A8P48029 635 aa14.09□□□□□ -0.15
CLN6-219ENST00000637329 KCNAB2Q13303 367 aa14.09□□□□□ -0.15
CLN6-219ENST00000637329 SKP2Q13309 424 aa14.09□□□□□ -0.15
CLN6-219ENST00000637329 KEAP1Q14145 624 aa14.09□□□□□ -0.15
CLN6-219ENST00000637329 PDK3Q15120 406 aa14.09□□□□□ -0.15
CLN6-219ENST00000637329 FAM69BQ5VUD6 431 aa14.09□□□□□ -0.15
CLN6-219ENST00000637329 MRGPREQ86SM8 312 aa14.09□□□□□ -0.15
CLN6-219ENST00000637329 POGLUT1Q8NBL1 392 aa14.09□□□□□ -0.15
CLN6-219ENST00000637329 AQP11Q8NBQ7 271 aa14.09□□□□□ -0.15
CLN6-219ENST00000637329 OR9Q2Q8NGE9 314 aa14.09□□□□□ -0.15
CLN6-219ENST00000637329 RNF138Q8WVD3 245 aa14.09□□□□□ -0.15
CLN6-219ENST00000637329 ACOT11Q8WXI4 607 aaPredicted RBP14.09□□□□□ -0.15
CLN6-219ENST00000637329 TTC9Q92623 222 aa14.09□□□□□ -0.15
CLN6-219ENST00000637329 CCNL2Q96S94 520 aaPredicted RBP14.09□□□□□ -0.15
CLN6-219ENST00000637329 TMEM27Q9HBJ8 222 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms