RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 EIF1BO60739 113 aaKnown RBP2.75□□□□□ -1.97
VIM-210ENST00000637053 SC5DO75845 299 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 MT-CYBP00156 380 aaPredicted RBP2.75□□□□□ -1.97
VIM-210ENST00000637053 RAF1P04049 648 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 SFTPBP07988 381 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 HCKP08631 526 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 OCM2P0CE71 109 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 RAP2AP10114 183 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 THRAP10827 490 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 CDH1P12830 882 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 ATP1B2P14415 290 aaPredicted RBP2.75□□□□□ -1.97
VIM-210ENST00000637053 HLA-GP17693 338 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 TSPAN8P19075 237 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 PMCHP20382 165 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 S100PP25815 95 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 GABRA5P31644 462 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 UQCRC1P31930 480 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 GKP32189 559 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 CCKBRP32239 447 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 EIF1P41567 113 aaKnown RBP2.75□□□□□ -1.97
VIM-210ENST00000637053 CDX1P47902 265 aaPredicted RBP2.75□□□□□ -1.97
VIM-210ENST00000637053 SLC6A8P48029 635 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 DNA2P51530 1060 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 KCNQ1P51787 676 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 PRKXP51817 358 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 PRELPP51888 382 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 ACLYP53396 1101 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 FGF8P55075 233 aaPredicted RBP2.75□□□□□ -1.97
VIM-210ENST00000637053 GNG2P59768 71 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 MRPS34P82930 218 aaKnown RBP2.75□□□□□ -1.97
VIM-210ENST00000637053 VLDLRP98155 873 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 SP3Q02447 781 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 SRSF1Q07955 248 aaKnown RBP eCLIP2.75□□□□□ -1.97
VIM-210ENST00000637053 AESQ08117 197 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 GRIK2Q13002 908 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 GK3PQ14409 553 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 HNF4GQ14541 408 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 GPNMBQ14956 572 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 TAF1AQ15573 450 aaPredicted RBP2.75□□□□□ -1.97
VIM-210ENST00000637053 HLFQ16534 295 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 SYPL1Q16563 259 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 KCTD19Q17RG1 926 aaPredicted RBP2.75□□□□□ -1.97
VIM-210ENST00000637053 KLHL12Q53G59 568 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 EARS2Q5JPH6 523 aaKnown RBP2.75□□□□□ -1.97
VIM-210ENST00000637053 FAM46CQ5VWP2 391 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 OR4F3Q6IEY1 312 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 ADAM5Q6NVV9 412 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 ACSM6Q6P461 480 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 CWC27Q6UX04 472 aaKnown RBP2.75□□□□□ -1.97
VIM-210ENST00000637053 LINGO4Q6UY18 593 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 QSOX2Q6ZRP7 698 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 CDHR3Q6ZTQ4 885 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 CENPUQ71F23 418 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 PRSS45Q7RTY3 260 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 H2BFWTQ7Z2G1 175 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 DPY19L4Q7Z388 723 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 ZNF572Q7Z3I7 529 aaPredicted RBP2.75□□□□□ -1.97
VIM-210ENST00000637053 RNF144BQ7Z419 303 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 TFAP2DQ7Z6R9 452 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 LYG2Q86SG7 212 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 SETD3Q86TU7 594 aaPredicted RBP2.75□□□□□ -1.97
VIM-210ENST00000637053 IGFN1Q86VF2 1251 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 RANBP3LQ86VV4 465 aaPredicted RBP2.75□□□□□ -1.97
VIM-210ENST00000637053 CCDC71Q8IV32 467 aaPredicted RBP2.75□□□□□ -1.97
VIM-210ENST00000637053 VRK3Q8IV63 474 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 TRIM48Q8IWZ4 208 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 GPR135Q8IZ08 494 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 C2orf73Q8N5S3 287 aaPredicted RBP2.75□□□□□ -1.97
VIM-210ENST00000637053 CPSF7Q8N684 471 aaKnown RBP2.75□□□□□ -1.97
VIM-210ENST00000637053 ZNF611Q8N823 705 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 EXD3Q8N9H8 876 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 CDRT4Q8N9R6 151 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 BOLLQ8N9W6 283 aaKnown RBP2.75□□□□□ -1.97
VIM-210ENST00000637053 B3GNT7Q8NFL0 401 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 OR2AP1Q8NGE2 309 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 OR51G2Q8NGK0 314 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 OR10Q1Q8NGQ4 319 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 VANGL1Q8TAA9 524 aaPredicted RBP2.75□□□□□ -1.97
VIM-210ENST00000637053 WDR20Q8TBZ3 569 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 MRAPQ8TCY5 172 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 BLOC1S5Q8TDH9 187 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 CA5BP1Q8WTZ4 195 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 PHF10Q8WUB8 498 aaKnown RBP2.75□□□□□ -1.97
VIM-210ENST00000637053 TM9SF4Q92544 642 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 CDS1Q92903 461 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 YIPF5Q969M3 257 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 PPWD1Q96BP3 646 aaKnown RBP2.75□□□□□ -1.97
VIM-210ENST00000637053 C10orf35Q96D05 121 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 HPDLQ96IR7 371 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 RNF170Q96K19 258 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 VSTM2LQ96N03 204 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 GPR137Q96N19 417 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 ZNF285Q96NJ3 590 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 AMDHD1Q96NU7 426 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 SERPINB12Q96P63 405 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 SLC38A2Q96QD8 506 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 XPO6Q96QU8 1125 aaKnown RBP2.75□□□□□ -1.97
VIM-210ENST00000637053 SNX18Q96RF0 628 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 DDOQ99489 341 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 C12orf57Q99622 126 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms