RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 XCR1P46094 333 aa10.72□□□□□ -0.69
CLN6-217ENST00000636964 KHKP50053 298 aa10.72□□□□□ -0.69
CLN6-217ENST00000636964 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.72□□□□□ -0.69
CLN6-217ENST00000636964 MCATQ8IVS2 390 aaKnown RBP10.72□□□□□ -0.69
CLN6-217ENST00000636964 LGI4Q8N135 537 aa10.72□□□□□ -0.69
CLN6-217ENST00000636964 ZNF655Q8N720 491 aaPredicted RBP10.72□□□□□ -0.69
CLN6-217ENST00000636964 C19orf47Q8N9M1 422 aaKnown RBP10.72□□□□□ -0.69
CLN6-217ENST00000636964 ZNF527Q8NB42 609 aa10.72□□□□□ -0.69
CLN6-217ENST00000636964 OR10G2Q8NGC3 310 aa10.72□□□□□ -0.69
CLN6-217ENST00000636964 C1orf216Q8TAB5 229 aa10.72□□□□□ -0.69
CLN6-217ENST00000636964 ZNF607Q96SK3 696 aa10.72□□□□□ -0.69
CLN6-217ENST00000636964 NIPSNAP1Q9BPW8 284 aa10.72□□□□□ -0.69
CLN6-217ENST00000636964 ACER3Q9NUN7 267 aa10.72□□□□□ -0.69
CLN6-217ENST00000636964 ENPP4Q9Y6X5 453 aa10.72□□□□□ -0.69
CLN6-217ENST00000636964 LOC100506127A0A0U1RQW1 187 aa10.72□□□□□ -0.69
CLN6-217ENST00000636964 OR2W5A6NFC9 320 aa10.72□□□□□ -0.69
CLN6-217ENST00000636964 HMX3A6NHT5 357 aa10.72□□□□□ -0.69
CLN6-217ENST00000636964 M0R3H8 397 aa10.72□□□□□ -0.69
CLN6-217ENST00000636964 TFECO14948 347 aaPredicted RBP10.72□□□□□ -0.69
CLN6-217ENST00000636964 GADD45GO95257 159 aa10.72□□□□□ -0.69
CLN6-217ENST00000636964 MED26O95402 600 aa10.72□□□□□ -0.69
CLN6-217ENST00000636964 CLEC2LP0C7M8 214 aa10.72□□□□□ -0.69
CLN6-217ENST00000636964 PPP2R1BP30154 601 aa10.72□□□□□ -0.69
CLN6-217ENST00000636964 TARDBPQ13148 414 aaKnown RBP eCLIP10.72□□□□□ -0.692e-43■■■■■ 32.4
CLN6-217ENST00000636964 RFX4Q33E94 735 aa10.72□□□□□ -0.69
CLN6-217ENST00000636964 BHLHB9Q6PI77 547 aa10.72□□□□□ -0.69
CLN6-217ENST00000636964 TMEM64Q6YI46 380 aa10.72□□□□□ -0.69
CLN6-217ENST00000636964 SLC46A3Q7Z3Q1 461 aa10.72□□□□□ -0.69
CLN6-217ENST00000636964 SLC30A8Q8IWU4 369 aa10.72□□□□□ -0.69
CLN6-217ENST00000636964 METTL27Q8N6F8 245 aaPredicted RBP10.72□□□□□ -0.69
CLN6-217ENST00000636964 SLC16A11Q8NCK7 471 aa10.72□□□□□ -0.69
CLN6-217ENST00000636964 OR56A1Q8NGH5 318 aa10.72□□□□□ -0.69
CLN6-217ENST00000636964 LRRC20Q8TCA0 184 aa10.72□□□□□ -0.69
CLN6-217ENST00000636964 THSD1Q9NS62 852 aa10.72□□□□□ -0.69
CLN6-217ENST00000636964 NDRG4Q9ULP0 352 aaKnown RBP10.72□□□□□ -0.69
CLN6-217ENST00000636964 GMPPBQ9Y5P6 360 aa10.72□□□□□ -0.69
CLN6-217ENST00000636964 A3GALT2U3KPV4 340 aa10.72□□□□□ -0.69
CLN6-217ENST00000636964 A0A0A6YYC8 382 aaPredicted RBP10.71□□□□□ -0.69
CLN6-217ENST00000636964 I3L1I5 382 aaPredicted RBP10.71□□□□□ -0.69
CLN6-217ENST00000636964 K7ESF4 209 aa10.71□□□□□ -0.69
CLN6-217ENST00000636964 GALR3O60755 368 aaPredicted RBP10.71□□□□□ -0.69
CLN6-217ENST00000636964 CDC123O75794 336 aaPredicted RBP10.71□□□□□ -0.69
CLN6-217ENST00000636964 IFNA16P05015 189 aa10.71□□□□□ -0.69
CLN6-217ENST00000636964 ZNF10P21506 573 aaPredicted RBP10.71□□□□□ -0.69
CLN6-217ENST00000636964 CTSKP43235 329 aa10.71□□□□□ -0.69
CLN6-217ENST00000636964 NXPH1P58417 271 aa10.71□□□□□ -0.69
CLN6-217ENST00000636964 CXCR4P61073 352 aa10.71□□□□□ -0.69
CLN6-217ENST00000636964 DBPQ10586 325 aaPredicted RBP10.71□□□□□ -0.69
CLN6-217ENST00000636964 ELOAQ14241 798 aaKnown RBP10.71□□□□□ -0.69
CLN6-217ENST00000636964 ZNF79Q15937 498 aa10.71□□□□□ -0.69
CLN6-217ENST00000636964 CAMKK1Q8N5S9 505 aa10.71□□□□□ -0.69
CLN6-217ENST00000636964 GRPEL2Q8TAA5 225 aa10.71□□□□□ -0.69
CLN6-217ENST00000636964 FAM174AQ8TBP5 190 aa10.71□□□□□ -0.69
CLN6-217ENST00000636964 GTPBP3Q969Y2 492 aaKnown RBP10.71□□□□□ -0.69
CLN6-217ENST00000636964 PRR14Q9BWN1 585 aa10.71□□□□□ -0.69
CLN6-217ENST00000636964 CAPN10Q9HC96 672 aa10.71□□□□□ -0.69
CLN6-217ENST00000636964 ZSCAN32Q9NX65 697 aa10.71□□□□□ -0.69
CLN6-217ENST00000636964 CEP192Q8TEP8 1941 aa10.71□□□□□ -0.69
CLN6-217ENST00000636964 THADAQ6YHU6 1953 aa10.71□□□□□ -0.69
CLN6-217ENST00000636964 A0A1B0GVT2 93 aa10.71□□□□□ -0.69
CLN6-217ENST00000636964 PDGFBP01127 241 aaPredicted RBP10.71□□□□□ -0.69
CLN6-217ENST00000636964 UQCRC1P31930 480 aa10.71□□□□□ -0.69
CLN6-217ENST00000636964 FASLGP48023 281 aa10.71□□□□□ -0.69
CLN6-217ENST00000636964 RAB14P61106 215 aa10.71□□□□□ -0.69
CLN6-217ENST00000636964 HNRNPKP61978 463 aaKnown RBP eCLIP10.71□□□□□ -0.69
CLN6-217ENST00000636964 NPRL3Q12980 569 aa10.71□□□□□ -0.69
CLN6-217ENST00000636964 COTL1Q14019 142 aa10.71□□□□□ -0.69
CLN6-217ENST00000636964 ERV3-1Q14264 604 aa10.71□□□□□ -0.69
CLN6-217ENST00000636964 CEBPEQ15744 281 aa10.71□□□□□ -0.69
CLN6-217ENST00000636964 FAHD1Q6P587 224 aa10.71□□□□□ -0.69
CLN6-217ENST00000636964 OR4C15Q8NGM1 316 aa10.71□□□□□ -0.69
CLN6-217ENST00000636964 CLDN23Q96B33 292 aa10.71□□□□□ -0.69
CLN6-217ENST00000636964 TMEM68Q96MH6 324 aa10.71□□□□□ -0.69
CLN6-217ENST00000636964 KCNS3Q9BQ31 491 aa10.71□□□□□ -0.69
CLN6-217ENST00000636964 CCDC59Q9P031 241 aaKnown RBP10.71□□□□□ -0.69
CLN6-217ENST00000636964 HCN3Q9P1Z3 774 aa10.71□□□□□ -0.69
CLN6-217ENST00000636964 REV1Q9UBZ9 1251 aa10.71□□□□□ -0.69
CLN6-217ENST00000636964 TINAGQ9UJW2 476 aa10.71□□□□□ -0.69
CLN6-217ENST00000636964 KLK4Q9Y5K2 254 aa10.71□□□□□ -0.69
CLN6-217ENST00000636964 V9GYH0 126 aa10.71□□□□□ -0.69
CLN6-217ENST00000636964 A0A1B0GWJ7 208 aa10.71□□□□□ -0.7
CLN6-217ENST00000636964 E9PQ18 207 aa10.71□□□□□ -0.7
CLN6-217ENST00000636964 FCMRO60667 390 aa10.71□□□□□ -0.7
CLN6-217ENST00000636964 CLN5O75503 358 aa10.71□□□□□ -0.7
CLN6-217ENST00000636964 PDE9AO76083 593 aa10.71□□□□□ -0.7
CLN6-217ENST00000636964 IL7P13232 177 aa10.71□□□□□ -0.7
CLN6-217ENST00000636964 CPMP14384 443 aa10.71□□□□□ -0.7
CLN6-217ENST00000636964 SNRPD2P62316 118 aaKnown RBP10.71□□□□□ -0.7
CLN6-217ENST00000636964 MAT1AQ00266 395 aaKnown RBP10.71□□□□□ -0.7
CLN6-217ENST00000636964 LGALS3BPQ08380 585 aa10.71□□□□□ -0.7
CLN6-217ENST00000636964 PIN1Q13526 163 aaPredicted RBP10.71□□□□□ -0.7
CLN6-217ENST00000636964 MICAQ29983 383 aa10.71□□□□□ -0.7
CLN6-217ENST00000636964 LAMTOR1Q6IAA8 161 aa10.71□□□□□ -0.7
CLN6-217ENST00000636964 TCTN3Q6NUS6 607 aa10.71□□□□□ -0.7
CLN6-217ENST00000636964 TAGAPQ8N103 731 aa10.71□□□□□ -0.7
CLN6-217ENST00000636964 GJD3Q8N144 294 aa10.71□□□□□ -0.7
CLN6-217ENST00000636964 CA13Q8N1Q1 262 aa10.71□□□□□ -0.7
CLN6-217ENST00000636964 SFXN5Q8TD22 340 aa10.71□□□□□ -0.7
CLN6-217ENST00000636964 APOBEC4Q8WW27 367 aaKnown RBP10.71□□□□□ -0.7
CLN6-217ENST00000636964 SLC35A4Q96G79 324 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms