RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 A0A1W2PPE3 182 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 SH3PXD2BA1X283 911 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 CPED1A4D0V7 1026 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 ZNF840PA6NDX5 716 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 ANKUB1A6NFN9 424 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 SYCE1LA8MT33 242 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 A8MX80 341 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 H3BN98 237 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 TMEM189-UBE2V1I3L0A0 370 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 J3KR12 359 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 CLDN5O00501 218 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 TRAFD1O14545 582 aaPredicted RBP2.66□□□□□ -1.98
PSPC1-208ENST00000635562 CCSO14618 274 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 BET1O15155 118 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 SLC22A2O15244 555 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 STX7O15400 261 aaKnown RBP2.66□□□□□ -1.98
PSPC1-208ENST00000635562 SSX4O60224 188 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 MAGEC1O60732 1142 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 NXPH2O95156 264 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 NDUFB4O95168 129 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 SYNGR4O95473 234 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 MOCS2O96007 188 aaPredicted RBP2.66□□□□□ -1.98
PSPC1-208ENST00000635562 NUDT17P0C025 328 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 ETS2P15036 469 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 NCK1P16333 377 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 CD36P16671 472 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 GOT1P17174 413 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 UGT1A4P22310 534 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 FCARP24071 287 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 SSTR1P30872 391 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 GABRA5P31644 462 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 HNRNPH1P31943 449 aaKnown RBP2.66□□□□□ -1.98
PSPC1-208ENST00000635562 CDH5P33151 784 aaPredicted RBP2.66□□□□□ -1.98
PSPC1-208ENST00000635562 UGT1A3P35503 534 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 UGT1A5P35504 534 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 CFHR2P36980 270 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 HSD17B3P37058 310 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 TGFBR2P37173 567 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 RFX2P48378 723 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 CDK9P50750 372 aaKnown RBP2.66□□□□□ -1.98
PSPC1-208ENST00000635562 RPL14P50914 215 aaKnown RBP2.66□□□□□ -1.98
PSPC1-208ENST00000635562 RIDAP52758 137 aaKnown RBP2.66□□□□□ -1.98
PSPC1-208ENST00000635562 PSMD4P55036 377 aaKnown RBP2.66□□□□□ -1.98
PSPC1-208ENST00000635562 HNRNPH2P55795 449 aaKnown RBP2.66□□□□□ -1.98
PSPC1-208ENST00000635562 MLF1P58340 268 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 HERVK_113P63132 956 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 ERVK-25P63136 954 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 CDK3Q00526 305 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 RAD51Q06609 339 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 C2orf54Q08AI8 447 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 GRIK2Q13002 908 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 DYNC1I2Q13409 638 aaKnown RBP2.66□□□□□ -1.98
PSPC1-208ENST00000635562 MED21Q13503 144 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 CTTNQ14247 550 aaKnown RBP2.66□□□□□ -1.98
PSPC1-208ENST00000635562 HNF4GQ14541 408 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 PTGR1Q14914 329 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 TRAM2Q15035 370 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 ZBTB6Q15916 424 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 ACKR1Q16570 336 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 MEP1AQ16819 746 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 ZSWIM7Q19AV6 140 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 QRICH1Q2TAL8 776 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 CTU2Q2VPK5 515 aaKnown RBP2.66□□□□□ -1.98
PSPC1-208ENST00000635562 PTPN20Q4JDL3 420 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 TMEM35AQ53FP2 167 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 PIGGQ5H8A4 983 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 HES5Q5TA89 166 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 METTL21CQ5VZV1 264 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 ALS2CLQ60I27 953 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 OR2A2Q6IF42 318 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 SLC8B1Q6J4K2 584 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 CES5AQ6NT32 575 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 ZNF530Q6P9A1 599 aaPredicted RBP2.66□□□□□ -1.98
PSPC1-208ENST00000635562 KCNIP4Q6PIL6 250 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 ZNF562Q6V9R5 426 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 C3orf62Q6ZUJ4 267 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 CENPUQ71F23 418 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 G2E3Q7L622 706 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 IRF2BP2Q7Z5L9 587 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 CTU1Q7Z7A3 348 aaKnown RBP2.66□□□□□ -1.98
PSPC1-208ENST00000635562 ZNF546Q86UE3 836 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 PTOV1Q86YD1 416 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 MFSD6LQ8IWD5 586 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 ZC3H3Q8IXZ2 948 aaKnown RBP2.66□□□□□ -1.98
PSPC1-208ENST00000635562 FAM71AQ8IYT1 594 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 SLC38A6Q8IZM9 456 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 CMTM8Q8IZV2 173 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 TMEM123Q8N131 208 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 SYS1Q8N2H4 156 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 MARVELD2Q8N4S9 558 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 TMEM156Q8N614 296 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 C8orf31Q8N9H6 132 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.66□□□□□ -1.98
PSPC1-208ENST00000635562 CCDC71LQ8N9Z2 235 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 OR2D3Q8NGH3 330 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 OR2L8Q8NGY9 312 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 OR52N1Q8NH53 320 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 OR6X1Q8NH79 312 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 OR2V1Q8NHB1 315 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 SAP25Q8TEE9 199 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms