RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 DEFB109BQ30KR1 87 aa8.75□□□□□ -1.01
PDLIM5-223ENST00000627587 FLYWCH1Q4VC44 716 aa8.75□□□□□ -1.01
PDLIM5-223ENST00000627587 LIN52Q52LA3 116 aa8.75□□□□□ -1.01
PDLIM5-223ENST00000627587 FAM69BQ5VUD6 431 aa8.75□□□□□ -1.01
PDLIM5-223ENST00000627587 FAAH2Q6GMR7 532 aa8.75□□□□□ -1.01
PDLIM5-223ENST00000627587 KRT80Q6KB66 452 aa8.75□□□□□ -1.01
PDLIM5-223ENST00000627587 C9orf40Q8IXQ3 194 aa8.75□□□□□ -1.01
PDLIM5-223ENST00000627587 GIPC3Q8TF64 312 aa8.75□□□□□ -1.01
PDLIM5-223ENST00000627587 METTL21AQ8WXB1 218 aa8.75□□□□□ -1.01
PDLIM5-223ENST00000627587 ADIPOR1Q96A54 375 aa8.75□□□□□ -1.01
PDLIM5-223ENST00000627587 ABHD17AQ96GS6 310 aa8.75□□□□□ -1.01
PDLIM5-223ENST00000627587 LRFN5Q96NI6 719 aa8.75□□□□□ -1.01
PDLIM5-223ENST00000627587 PSD2Q9BQI7 771 aa8.75□□□□□ -1.01
PDLIM5-223ENST00000627587 G6PC3Q9BUM1 346 aa8.75□□□□□ -1.01
PDLIM5-223ENST00000627587 ULBP3Q9BZM4 244 aa8.75□□□□□ -1.01
PDLIM5-223ENST00000627587 SLC26A1Q9H2B4 701 aa8.75□□□□□ -1.01
PDLIM5-223ENST00000627587 ARMC7Q9H6L4 198 aa8.75□□□□□ -1.01
PDLIM5-223ENST00000627587 ZNF223Q9UK11 482 aaPredicted RBP8.75□□□□□ -1.01
PDLIM5-223ENST00000627587 CBLCQ9ULV8 474 aa8.75□□□□□ -1.01
PDLIM5-223ENST00000627587 IGHV3-20A0A0C4DH32 117 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 H0YAE9 185 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 MKRN2OSH3BPM6 223 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 ADAM11O75078 769 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 ALOX12BO75342 701 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 STK17BO94768 372 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 DLGAP3O95886 979 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 LYNP07948 512 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 NID1P14543 1247 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 CDH2P19022 906 aaPredicted RBP8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 MYF6P23409 242 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 ELAVL4P26378 380 aaKnown RBP8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 IFNA8P32881 189 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 PPICP45877 212 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 RNF144AP50876 292 aaPredicted RBP8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 EMP2P54851 167 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 RGS8P57771 180 aaPredicted RBP8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 HOXC5Q00444 222 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 MICAQ29983 383 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 FAM199XQ6PEV8 388 aaPredicted RBP8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 FAM198BQ6UWH4 519 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 TIPARPQ7Z3E1 657 aaKnown RBP8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 GALNT5Q7Z7M9 940 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 OFCC1Q8IZS5 231 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 SLC5A8Q8N695 610 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 TEX19Q8NA77 164 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 MORN4Q8NDC4 146 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 ZNF555Q8NEP9 628 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 OR10G2Q8NGC3 310 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 OR9Q2Q8NGE9 314 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 SLC7A13Q8TCU3 470 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 NR4A3Q92570 626 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 PRRC1Q96M27 445 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 FEVQ99581 238 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 WDR77Q9BQA1 342 aaPredicted RBP8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 NXF5Q9H1B4 397 aaKnown RBP8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 ZNF71Q9NQZ8 489 aaPredicted RBP8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 FAM118AQ9NWS6 357 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 GPN3Q9UHW5 284 aaPredicted RBP8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 NXT1Q9UKK6 140 aaKnown RBP8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 NTNG1Q9Y2I2 539 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 PCSK5Q92824 1860 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 CDHR4A6H8M9 788 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 MAGEA13PA6NCF6 341 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 OR6C76A6NM76 312 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 C9J4A7 227 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 AP3D1O14617 1153 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 CCNB2O95067 398 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 NTN1O95631 604 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 H1F0P07305 194 aaKnown RBP8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 CYC1P08574 325 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 CCNYL3P0C7X3 344 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 PRKAR1AP10644 381 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 PRG2P13727 222 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 ANXA8P13928 327 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 STAT5AP42229 794 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 CHN2P52757 468 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 DCAF7P61962 342 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 IL1RL1Q01638 556 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 EBPQ15125 230 aaKnown RBP8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 IGFBP7Q16270 282 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 FGD3Q5JSP0 725 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 MRPL2Q5T653 305 aaKnown RBP8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 RNF220Q5VTB9 566 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 TTC23Q5W5X9 447 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 HLA-DQA1Q5Y7H0 255 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 C6orf15Q6UXA7 325 aaPredicted RBP8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 SLC29A4Q7RTT9 530 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 ANKRD37Q7Z713 158 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 BCORP1Q8N888 145 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 APCDD1LQ8NCL9 501 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 PIK3C3Q8NEB9 887 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 NFAM1Q8NET5 270 aaPredicted RBP8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 OR1N1Q8NGS0 311 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 DIO2Q92813 273 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 MIB2Q96AX9 1013 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 ARSGQ96EG1 525 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 ALPK1Q96QP1 1244 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 NIPSNAP1Q9BPW8 284 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 CRB3Q9BUF7 120 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 FNDC11Q9BVV2 318 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms