RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 MED9Q9NWA0 146 aa14.17□□□□□ -0.14
PMS1-221ENST00000624204 CA5BQ9Y2D0 317 aa14.17□□□□□ -0.14
PMS1-221ENST00000624204 DYRK1BQ9Y463 629 aa14.17□□□□□ -0.14
PMS1-221ENST00000624204 PSMD9O00233 223 aa14.17□□□□□ -0.14
PMS1-221ENST00000624204 OR5F1O95221 314 aa14.17□□□□□ -0.14
PMS1-221ENST00000624204 NFATC1O95644 943 aa14.17□□□□□ -0.14
PMS1-221ENST00000624204 PPP3CBP16298 524 aa14.17□□□□□ -0.14
PMS1-221ENST00000624204 CCR9P51686 369 aa14.17□□□□□ -0.14
PMS1-221ENST00000624204 PLD1Q13393 1074 aa14.17□□□□□ -0.14
PMS1-221ENST00000624204 TPRG1Q6ZUI0 275 aa14.17□□□□□ -0.14
PMS1-221ENST00000624204 CPXM2Q8N436 756 aa14.17□□□□□ -0.14
PMS1-221ENST00000624204 C17orf47Q8NEP4 570 aa14.17□□□□□ -0.14
PMS1-221ENST00000624204 ABHD4Q8TB40 342 aa14.17□□□□□ -0.14
PMS1-221ENST00000624204 MICU1Q9BPX6 476 aa14.17□□□□□ -0.14
PMS1-221ENST00000624204 MACROD1Q9BQ69 325 aa14.17□□□□□ -0.14
PMS1-221ENST00000624204 ZNF649Q9BS31 505 aa14.17□□□□□ -0.14
PMS1-221ENST00000624204 AK6Q9Y3D8 172 aaKnown RBP14.17□□□□□ -0.14
PMS1-221ENST00000624204 HELZP42694 1942 aaKnown RBP14.17□□□□□ -0.14
PMS1-221ENST00000624204 SELENOFO60613 162 aa14.16□□□□□ -0.14
PMS1-221ENST00000624204 B4GALT2O60909 372 aa14.16□□□□□ -0.14
PMS1-221ENST00000624204 PRKRAO75569 313 aaKnown RBP14.16□□□□□ -0.14
PMS1-221ENST00000624204 TGM6O95932 706 aa14.16□□□□□ -0.14
PMS1-221ENST00000624204 GIPP09681 153 aaPredicted RBP14.16□□□□□ -0.14
PMS1-221ENST00000624204 IFNGR2P38484 337 aa14.16□□□□□ -0.14
PMS1-221ENST00000624204 ACSM3Q53FZ2 586 aa14.16□□□□□ -0.14
PMS1-221ENST00000624204 GNPDA2Q8TDQ7 276 aa14.16□□□□□ -0.14
PMS1-221ENST00000624204 MNTQ99583 582 aa14.16□□□□□ -0.14
PMS1-221ENST00000624204 TMEM138Q9NPI0 162 aa14.16□□□□□ -0.14
PMS1-221ENST00000624204 P2RX2Q9UBL9 471 aa14.16□□□□□ -0.14
PMS1-221ENST00000624204 KLK11Q9UBX7 282 aa14.16□□□□□ -0.14
PMS1-221ENST00000624204 ASCC3Q8N3C0 2202 aaKnown RBP14.16□□□□□ -0.14
PMS1-221ENST00000624204 SURF4O15260 269 aa14.16□□□□□ -0.14
PMS1-221ENST00000624204 TSPAN6O43657 245 aa14.16□□□□□ -0.14
PMS1-221ENST00000624204 NARSO43776 548 aaKnown RBP14.16□□□□□ -0.14
PMS1-221ENST00000624204 PRAF2O60831 178 aa14.16□□□□□ -0.14
PMS1-221ENST00000624204 RLN2P04090 185 aa14.16□□□□□ -0.14
PMS1-221ENST00000624204 C8orf89P0DMQ9 161 aa14.16□□□□□ -0.14
PMS1-221ENST00000624204 EPHA4P54764 986 aa14.16□□□□□ -0.14
PMS1-221ENST00000624204 FGL1Q08830 312 aa14.16□□□□□ -0.14
PMS1-221ENST00000624204 GRB14Q14449 540 aa14.16□□□□□ -0.14
PMS1-221ENST00000624204 RSPO2Q6UXX9 243 aaPredicted RBP14.16□□□□□ -0.14
PMS1-221ENST00000624204 SLC9B2Q86UD5 537 aa14.16□□□□□ -0.14
PMS1-221ENST00000624204 SMPDL3AQ92484 453 aa14.16□□□□□ -0.14
PMS1-221ENST00000624204 PRRC1Q96M27 445 aa14.16□□□□□ -0.14
PMS1-221ENST00000624204 C7orf50Q9BRJ6 194 aaKnown RBP14.16□□□□□ -0.14
PMS1-221ENST00000624204 HMX1Q9NP08 348 aaPredicted RBP14.16□□□□□ -0.14
PMS1-221ENST00000624204 MARK1Q9P0L2 795 aa14.16□□□□□ -0.14
PMS1-221ENST00000624204 EDARQ9UNE0 448 aa14.16□□□□□ -0.14
PMS1-221ENST00000624204 A0A0G2JK05 382 aa14.16□□□□□ -0.14
PMS1-221ENST00000624204 PRAMEF27A3QJZ7 478 aa14.16□□□□□ -0.14
PMS1-221ENST00000624204 MEIS3P1A6NDR6 274 aa14.16□□□□□ -0.14
PMS1-221ENST00000624204 ANKRD61A6NGH8 418 aa14.16□□□□□ -0.14
PMS1-221ENST00000624204 PDHA2P29803 388 aa14.16□□□□□ -0.14
PMS1-221ENST00000624204 HTR1FP30939 366 aa14.16□□□□□ -0.14
PMS1-221ENST00000624204 FZD5Q13467 585 aa14.16□□□□□ -0.14
PMS1-221ENST00000624204 OR5M1Q8NGP8 315 aa14.16□□□□□ -0.14
PMS1-221ENST00000624204 OR10K1Q8NGX5 313 aa14.16□□□□□ -0.14
PMS1-221ENST00000624204 TMEM169Q96HH4 297 aa14.16□□□□□ -0.14
PMS1-221ENST00000624204 GPR62Q9BZJ7 368 aa14.16□□□□□ -0.14
PMS1-221ENST00000624204 ESRP2Q9H6T0 727 aaKnown RBP14.16□□□□□ -0.14
PMS1-221ENST00000624204 SLC39A1Q9NY26 324 aa14.16□□□□□ -0.14
PMS1-221ENST00000624204 SLC6A5Q9Y345 797 aa14.16□□□□□ -0.14
PMS1-221ENST00000624204 IRAK3Q9Y616 596 aa14.16□□□□□ -0.14
PMS1-221ENST00000624204 ZNF821O75541 412 aaPredicted RBP14.15□□□□□ -0.14
PMS1-221ENST00000624204 IGSF6O95976 241 aa14.15□□□□□ -0.14
PMS1-221ENST00000624204 IGHA1P01876 353 aa14.15□□□□□ -0.14
PMS1-221ENST00000624204 MAGEB1P43366 347 aa14.15□□□□□ -0.14
PMS1-221ENST00000624204 GCGRP47871 477 aa14.15□□□□□ -0.14
PMS1-221ENST00000624204 POLR2GP62487 172 aaKnown RBP eCLIP14.15□□□□□ -0.14
PMS1-221ENST00000624204 TSPAN31Q12999 210 aa14.15□□□□□ -0.14
PMS1-221ENST00000624204 FAM209BQ5JX69 171 aa14.15□□□□□ -0.14
PMS1-221ENST00000624204 ZNF697Q5TEC3 545 aa14.15□□□□□ -0.14
PMS1-221ENST00000624204 LINC00471Q8N535 108 aa14.15□□□□□ -0.14
PMS1-221ENST00000624204 OR52I2Q8NH67 350 aa14.15□□□□□ -0.14
PMS1-221ENST00000624204 TRMT61BQ9BVS5 477 aaKnown RBP14.15□□□□□ -0.14
PMS1-221ENST00000624204 NPDC1Q9NQX5 325 aaPredicted RBP14.15□□□□□ -0.14
PMS1-221ENST00000624204 TRPM7Q96QT4 1865 aa14.15□□□□□ -0.14
PMS1-221ENST00000624204 TRAV20A0A0B4J274 112 aa14.15□□□□□ -0.14
PMS1-221ENST00000624204 KLHL18O94889 574 aa14.15□□□□□ -0.14
PMS1-221ENST00000624204 APOC1P02654 83 aa14.15□□□□□ -0.14
PMS1-221ENST00000624204 GAAP10253 952 aa14.15□□□□□ -0.14
PMS1-221ENST00000624204 PYCR1P32322 319 aa14.15□□□□□ -0.14
PMS1-221ENST00000624204 HCCSP53701 268 aa14.15□□□□□ -0.14
PMS1-221ENST00000624204 ACSM1Q08AH1 577 aa14.15□□□□□ -0.14
PMS1-221ENST00000624204 HAGHLQ6PII5 290 aaPredicted RBP14.15□□□□□ -0.14
PMS1-221ENST00000624204 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.15□□□□□ -0.14
PMS1-221ENST00000624204 LRRC56Q8IYG6 542 aaPredicted RBP14.15□□□□□ -0.14
PMS1-221ENST00000624204 PM20D2Q8IYS1 436 aa14.15□□□□□ -0.14
PMS1-221ENST00000624204 CYB561A3Q8NBI2 242 aa14.15□□□□□ -0.14
PMS1-221ENST00000624204 OR5T2Q8NGG2 359 aa14.15□□□□□ -0.14
PMS1-221ENST00000624204 PIGXQ8TBF5 258 aa14.15□□□□□ -0.14
PMS1-221ENST00000624204 LGALS14Q8TCE9 139 aa14.15□□□□□ -0.14
PMS1-221ENST00000624204 SMIM4Q8WVI0 70 aa14.15□□□□□ -0.14
PMS1-221ENST00000624204 CCDC86Q9H6F5 360 aaKnown RBP14.15□□□□□ -0.14
PMS1-221ENST00000624204 PURGQ9UJV8 347 aaKnown RBP14.15□□□□□ -0.14
PMS1-221ENST00000624204 KLF2Q9Y5W3 355 aaPredicted RBP14.15□□□□□ -0.14
PMS1-221ENST00000624204 A0A1B0GUH1 482 aa14.15□□□□□ -0.14
PMS1-221ENST00000624204 PRICKLE3O43900 615 aaPredicted RBP14.15□□□□□ -0.14
PMS1-221ENST00000624204 STX11O75558 287 aa14.15□□□□□ -0.14
PMS1-221ENST00000624204 ZDHHC11BP0C7U3 371 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms