RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 CHMP24386 653 aa17.1■□□□□ 0.33
PCDHB2-202ENST00000622947 PGDP52209 483 aa17.1■□□□□ 0.33
PCDHB2-202ENST00000622947 ZNF136P52737 540 aa17.1■□□□□ 0.33
PCDHB2-202ENST00000622947 PTGES3Q15185 160 aaKnown RBP17.1■□□□□ 0.33
PCDHB2-202ENST00000622947 TMEM71Q6P5X7 295 aa17.1■□□□□ 0.33
PCDHB2-202ENST00000622947 ZER1Q7Z7L7 766 aa17.1■□□□□ 0.33
PCDHB2-202ENST00000622947 MEX3DQ86XN8 651 aaKnown RBP17.1■□□□□ 0.33
PCDHB2-202ENST00000622947 IL17RDQ8NFM7 739 aa17.1■□□□□ 0.33
PCDHB2-202ENST00000622947 ARSGQ96EG1 525 aa17.1■□□□□ 0.33
PCDHB2-202ENST00000622947 TMEM246Q9BRR3 403 aa17.1■□□□□ 0.33
PCDHB2-202ENST00000622947 LMF2Q9BU23 707 aaKnown RBP17.1■□□□□ 0.33
PCDHB2-202ENST00000622947 SLIRPQ9GZT3 109 aaKnown RBP17.1■□□□□ 0.33
PCDHB2-202ENST00000622947 DUSP21Q9H596 190 aa17.1■□□□□ 0.33
PCDHB2-202ENST00000622947 DDX28Q9NUL7 540 aaKnown RBP17.1■□□□□ 0.33
PCDHB2-202ENST00000622947 ERVK-19Q9WJR5 959 aa17.1■□□□□ 0.33
PCDHB2-202ENST00000622947 TBX1O43435 398 aa17.09■□□□□ 0.33
PCDHB2-202ENST00000622947 PRKNO60260 465 aaPredicted RBP17.09■□□□□ 0.33
PCDHB2-202ENST00000622947 BRINP1O60477 761 aa17.09■□□□□ 0.33
PCDHB2-202ENST00000622947 TP53P04637 393 aaPredicted RBP17.09■□□□□ 0.33
PCDHB2-202ENST00000622947 PRG2P13727 222 aa17.09■□□□□ 0.33
PCDHB2-202ENST00000622947 PNLIPP16233 465 aa17.09■□□□□ 0.33
PCDHB2-202ENST00000622947 KRT20P35900 424 aa17.09■□□□□ 0.33
PCDHB2-202ENST00000622947 POU6F2P78424 691 aaPredicted RBP17.09■□□□□ 0.33
PCDHB2-202ENST00000622947 C1orf189Q5VU69 101 aa17.09■□□□□ 0.33
PCDHB2-202ENST00000622947 TMEM151BQ8IW70 566 aa17.09■□□□□ 0.33
PCDHB2-202ENST00000622947 TSLPQ969D9 159 aa17.09■□□□□ 0.33
PCDHB2-202ENST00000622947 CNPPD1Q9BV87 410 aa17.09■□□□□ 0.33
PCDHB2-202ENST00000622947 ZNF226Q9NYT6 803 aa17.09■□□□□ 0.33
PCDHB2-202ENST00000622947 ERVK-18Q9QC07 812 aa17.09■□□□□ 0.33
PCDHB2-202ENST00000622947 NUP210LQ5VU65 1888 aa17.09■□□□□ 0.33
PCDHB2-202ENST00000622947 CENPXA8MT69 81 aa17.09■□□□□ 0.33
PCDHB2-202ENST00000622947 SOX14O95416 240 aa17.09■□□□□ 0.33
PCDHB2-202ENST00000622947 ADAP00813 363 aa17.09■□□□□ 0.33
PCDHB2-202ENST00000622947 MMP11P24347 488 aa17.09■□□□□ 0.33
PCDHB2-202ENST00000622947 VBP1P61758 197 aa17.09■□□□□ 0.33
PCDHB2-202ENST00000622947 SLC35A2P78381 396 aa17.09■□□□□ 0.33
PCDHB2-202ENST00000622947 FUT7Q11130 342 aa17.09■□□□□ 0.33
PCDHB2-202ENST00000622947 ZFP69Q49AA0 526 aa17.09■□□□□ 0.33
PCDHB2-202ENST00000622947 VWA2Q5GFL6 755 aa17.09■□□□□ 0.33
PCDHB2-202ENST00000622947 ENTPD8Q5MY95 495 aa17.09■□□□□ 0.33
PCDHB2-202ENST00000622947 CCBE1Q6UXH8 406 aaPredicted RBP17.09■□□□□ 0.33
PCDHB2-202ENST00000622947 ZNF321PQ8N8H1 164 aa17.09■□□□□ 0.33
PCDHB2-202ENST00000622947 ZNF615Q8N8J6 731 aa17.09■□□□□ 0.33
PCDHB2-202ENST00000622947 ZSCAN1Q8NBB4 408 aa17.09■□□□□ 0.33
PCDHB2-202ENST00000622947 OR4K5Q8NGD3 323 aa17.09■□□□□ 0.33
PCDHB2-202ENST00000622947 C16orf52Q8NHV5 167 aa17.09■□□□□ 0.33
PCDHB2-202ENST00000622947 FAR1Q8WVX9 515 aa17.09■□□□□ 0.33
PCDHB2-202ENST00000622947 YIPF6Q96EC8 236 aa17.09■□□□□ 0.33
PCDHB2-202ENST00000622947 PTCHD1Q96NR3 888 aa17.09■□□□□ 0.33
PCDHB2-202ENST00000622947 COQ7Q99807 217 aa17.09■□□□□ 0.33
PCDHB2-202ENST00000622947 FKBP14Q9NWM8 211 aa17.09■□□□□ 0.33
PCDHB2-202ENST00000622947 KCNN3Q9UGI6 736 aa17.09■□□□□ 0.33
PCDHB2-202ENST00000622947 PCDHGB1Q9Y5G3 927 aa17.09■□□□□ 0.33
PCDHB2-202ENST00000622947 A0A087WUU8 490 aa17.08■□□□□ 0.33
PCDHB2-202ENST00000622947 M0R296 226 aa17.08■□□□□ 0.33
PCDHB2-202ENST00000622947 CT45A8P0DMV1 189 aa17.08■□□□□ 0.33
PCDHB2-202ENST00000622947 CT45A9P0DMV2 189 aa17.08■□□□□ 0.33
PCDHB2-202ENST00000622947 GABRB1P18505 474 aa17.08■□□□□ 0.33
PCDHB2-202ENST00000622947 RFX3P48380 749 aa17.08■□□□□ 0.33
PCDHB2-202ENST00000622947 IDH2P48735 452 aaKnown RBP17.08■□□□□ 0.33
PCDHB2-202ENST00000622947 RGS8P57771 180 aaPredicted RBP17.08■□□□□ 0.33
PCDHB2-202ENST00000622947 FOXL2P58012 376 aa17.08■□□□□ 0.33
PCDHB2-202ENST00000622947 TAS2R41P59536 307 aa17.08■□□□□ 0.33
PCDHB2-202ENST00000622947 TARDBPQ13148 414 aaKnown RBP eCLIP17.08■□□□□ 0.33
PCDHB2-202ENST00000622947 SQSTM1Q13501 440 aa17.08■□□□□ 0.33
PCDHB2-202ENST00000622947 NNATQ16517 81 aa17.08■□□□□ 0.33
PCDHB2-202ENST00000622947 LPAL2Q16609 132 aa17.08■□□□□ 0.33
PCDHB2-202ENST00000622947 CT45A2Q5DJT8 189 aa17.08■□□□□ 0.33
PCDHB2-202ENST00000622947 KMT5CQ86Y97 462 aa17.08■□□□□ 0.33
PCDHB2-202ENST00000622947 FAM181AQ8N9Y4 354 aa17.08■□□□□ 0.33
PCDHB2-202ENST00000622947 DTWD2Q8NBA8 298 aa17.08■□□□□ 0.33
PCDHB2-202ENST00000622947 PTPMT1Q8WUK0 201 aaPredicted RBP17.08■□□□□ 0.33
PCDHB2-202ENST00000622947 MVB12AQ96EY5 273 aa17.08■□□□□ 0.33
PCDHB2-202ENST00000622947 C12orf10Q9HB07 376 aa17.08■□□□□ 0.33
PCDHB2-202ENST00000622947 FBXO9Q9UK97 447 aaPredicted RBP17.08■□□□□ 0.33
PCDHB2-202ENST00000622947 SLC13A4Q9UKG4 626 aa17.08■□□□□ 0.33
PCDHB2-202ENST00000622947 TPRKBQ9Y3C4 175 aa17.08■□□□□ 0.33
PCDHB2-202ENST00000622947 ZAR1LA6NP61 321 aa17.08■□□□□ 0.32
PCDHB2-202ENST00000622947 FAM25AB3EWG3 89 aa17.08■□□□□ 0.32
PCDHB2-202ENST00000622947 FAM25CB3EWG5 89 aa17.08■□□□□ 0.32
PCDHB2-202ENST00000622947 FAM25GB3EWG6 89 aa17.08■□□□□ 0.32
PCDHB2-202ENST00000622947 CYP7B1O75881 506 aa17.08■□□□□ 0.32
PCDHB2-202ENST00000622947 IFNA16P05015 189 aa17.08■□□□□ 0.32
PCDHB2-202ENST00000622947 THBS1P07996 1170 aa17.08■□□□□ 0.32
PCDHB2-202ENST00000622947 GKN3PP0CG01 181 aa17.08■□□□□ 0.32
PCDHB2-202ENST00000622947 CRISP1P54107 249 aa17.08■□□□□ 0.32
PCDHB2-202ENST00000622947 SMIM11AP58511 58 aa17.08■□□□□ 0.32
PCDHB2-202ENST00000622947 LSM3P62310 102 aaKnown RBP17.08■□□□□ 0.32
PCDHB2-202ENST00000622947 LARS2Q15031 903 aaKnown RBP17.08■□□□□ 0.32
PCDHB2-202ENST00000622947 PROX2Q3B8N5 592 aa17.08■□□□□ 0.32
PCDHB2-202ENST00000622947 MRPL2Q5T653 305 aaKnown RBP17.08■□□□□ 0.32
PCDHB2-202ENST00000622947 P2RY8Q86VZ1 359 aa17.08■□□□□ 0.32
PCDHB2-202ENST00000622947 CCDC28AQ8IWP9 274 aa17.08■□□□□ 0.32
PCDHB2-202ENST00000622947 GPR135Q8IZ08 494 aa17.08■□□□□ 0.32
PCDHB2-202ENST00000622947 AMER2Q8N7J2 671 aa17.08■□□□□ 0.32
PCDHB2-202ENST00000622947 MCFD2Q8NI22 146 aa17.08■□□□□ 0.32
PCDHB2-202ENST00000622947 NDC1Q9BTX1 674 aa17.08■□□□□ 0.32
PCDHB2-202ENST00000622947 UCK2Q9BZX2 261 aa17.08■□□□□ 0.32
PCDHB2-202ENST00000622947 OR10A5Q9H207 317 aa17.08■□□□□ 0.32
PCDHB2-202ENST00000622947 SMOC1Q9H4F8 434 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms