RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 PATE1Q8WXA2 126 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 ABHD8Q96I13 439 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 CMC2Q9NRP2 79 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 INPP5EQ9NRR6 644 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 TOR4AQ9NXH8 423 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 USP36Q9P275 1121 aaKnown RBP8.74□□□□□ -1.01
PDPN-212ENST00000621990 MSRAQ9UJ68 235 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 OR5K4A6NMS3 321 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 GABRPO00591 440 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 RCBTB2O95199 551 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 CBX7O95931 251 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 TNFP01375 233 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 IGLV3-19P01714 112 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 IGHV4-34P06331 123 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 GABRG2P18507 467 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 RAB38P57729 211 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 POU6F2P78424 691 aaPredicted RBP8.74□□□□□ -1.01
PDPN-212ENST00000621990 RAB30Q15771 203 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 BCL2A1Q16548 175 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 ZNF791Q3KP31 576 aaPredicted RBP8.74□□□□□ -1.01
PDPN-212ENST00000621990 PRPF38BQ5VTL8 546 aaKnown RBP8.74□□□□□ -1.01
PDPN-212ENST00000621990 ZNF544Q6NX49 715 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 PLBD1Q6P4A8 553 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 SLC43A2Q8N370 569 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 ZFP41Q8N8Y5 198 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 OR13H1Q8NG92 308 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 OR6F1Q8NGZ6 308 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 BPIFA2Q96DR5 249 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 DIRAS2Q96HU8 199 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 NEDD4LQ96PU5 975 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 CTRCQ99895 268 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 ATF6BQ99941 703 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 ZNF559Q9BR84 538 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 LMF2Q9BU23 707 aaKnown RBP8.74□□□□□ -1.01
PDPN-212ENST00000621990 GSDMCQ9BYG8 508 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 ENKD1Q9H0I2 346 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 PPP1R3EQ9H7J1 279 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 SLC28A3Q9HAS3 691 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 TIGARQ9NQ88 270 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 HRASLS2Q9NWW9 162 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 H2AFY2Q9P0M6 372 aaPredicted RBP8.74□□□□□ -1.01
PDPN-212ENST00000621990 SIGLEC7Q9Y286 467 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 EYSQ5T1H1 3165 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 A0A0B4J2E0 115 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 A0A1B0GX12 115 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 SHISA3A0PJX4 238 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 CCDC182A6NF36 153 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 FAM183AA6NL82 134 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 PRAMEF26H0Y7S4 382 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 PTP4A3O75365 173 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 SEMA4FO95754 770 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 TRAPPC2P0DI81 140 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 TRAPPC2BP0DI82 140 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 IFI30P13284 250 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 CD53P19397 219 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 CELP19835 753 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 S1PR1P21453 382 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 MAGEA10P43363 369 aaPredicted RBP8.73□□□□□ -1.01
PDPN-212ENST00000621990 RPS5P46782 204 aaKnown RBP8.73□□□□□ -1.01
PDPN-212ENST00000621990 EXOSC7Q15024 291 aaKnown RBP8.73□□□□□ -1.01
PDPN-212ENST00000621990 AMZ1Q400G9 498 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 ZNF362Q5T0B9 420 aaPredicted RBP8.73□□□□□ -1.01
PDPN-212ENST00000621990 SMARCD3Q6STE5 483 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 ZNF517Q6ZMY9 492 aaPredicted RBP8.73□□□□□ -1.01
PDPN-212ENST00000621990 TMEM91Q6ZNR0 172 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 ACBD7Q8N6N7 88 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 SCAIQ8N9R8 606 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 ATP6V1C2Q8NEY4 427 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 RPLP0P6Q8NHW5 317 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 SLC37A2Q8TED4 501 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 SLC35B4Q969S0 331 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 SLC22A4Q9H015 551 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 C8orf33Q9H7E9 229 aaPredicted RBP8.73□□□□□ -1.01
PDPN-212ENST00000621990 MOV10Q9HCE1 1003 aaKnown RBP8.73□□□□□ -1.01
PDPN-212ENST00000621990 ATP13A2Q9NQ11 1180 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 MEPEQ9NQ76 525 aaPredicted RBP8.73□□□□□ -1.01
PDPN-212ENST00000621990 SCN2AQ99250 2005 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 CACNA1IQ9P0X4 2223 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.73□□□□□ -1.01
PDPN-212ENST00000621990 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.73□□□□□ -1.01
PDPN-212ENST00000621990 TCRBV21S2A2A0A5A6 115 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 GXYLT2A0PJZ3 443 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 OR5K3A6NET4 321 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 CASKO14936 926 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 CHP2O43745 196 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 COQ9O75208 318 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 BMP7P18075 431 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 FUT1P19526 365 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 SLC2A5P22732 501 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 AZGP1P25311 298 aaKnown RBP8.73□□□□□ -1.01
PDPN-212ENST00000621990 GABRA3P34903 492 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 RBM34P42696 430 aaKnown RBP8.73□□□□□ -1.01
PDPN-212ENST00000621990 FOXK2Q01167 660 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 EIF2B5Q13144 721 aaKnown RBP8.73□□□□□ -1.01
PDPN-212ENST00000621990 GALEQ14376 348 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 CARTPTQ16568 116 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 TMEM31Q5JXX7 168 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 SLC35F1Q5T1Q4 408 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 FIGNL1Q6PIW4 674 aa8.73□□□□□ -1.01
PDPN-212ENST00000621990 THSD4Q6ZMP0 1018 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms