RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 AHSPQ9NZD4 102 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 MAT2BQ9NZL9 334 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 PRODH2Q9UF12 536 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 CD300AQ9UGN4 299 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 RNF11Q9Y3C5 154 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 DTNAQ9Y4J8 743 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 RAI1Q7Z5J4 1906 aaPredicted RBP7.05□□□□□ -1.28
CLK1-215ENST00000621181 FRG2CA6NGY1 282 aa7.05□□□□□ -1.28
CLK1-215ENST00000621181 LRRC14BA6NHZ5 514 aa7.05□□□□□ -1.28
CLK1-215ENST00000621181 OR6C70A6NIJ9 312 aa7.05□□□□□ -1.28
CLK1-215ENST00000621181 TRPC5OSA6NMA1 111 aa7.05□□□□□ -1.28
CLK1-215ENST00000621181 UBFD1O14562 309 aaKnown RBP7.05□□□□□ -1.28
CLK1-215ENST00000621181 HCRTR2O43614 444 aa7.05□□□□□ -1.28
CLK1-215ENST00000621181 GUCY1B2O75343 617 aa7.05□□□□□ -1.28
CLK1-215ENST00000621181 TP53P04637 393 aaPredicted RBP7.05□□□□□ -1.28
CLK1-215ENST00000621181 ZNF26P17031 533 aaPredicted RBP7.05□□□□□ -1.28
CLK1-215ENST00000621181 CSNK2A2P19784 350 aaPredicted RBP7.05□□□□□ -1.28
CLK1-215ENST00000621181 DRD5P21918 477 aa7.05□□□□□ -1.28
CLK1-215ENST00000621181 ME2P23368 584 aa7.05□□□□□ -1.28
CLK1-215ENST00000621181 IL12BP29460 328 aa7.05□□□□□ -1.28
CLK1-215ENST00000621181 KIR2DL2P43627 348 aaPredicted RBP7.05□□□□□ -1.28
CLK1-215ENST00000621181 PPICP45877 212 aa7.05□□□□□ -1.28
CLK1-215ENST00000621181 ATP4BP51164 291 aa7.05□□□□□ -1.28
CLK1-215ENST00000621181 MAP4K2Q12851 820 aa7.05□□□□□ -1.28
CLK1-215ENST00000621181 PDCD2Q16342 344 aaPredicted RBP7.05□□□□□ -1.28
CLK1-215ENST00000621181 BCL2A1Q16548 175 aa7.05□□□□□ -1.28
CLK1-215ENST00000621181 FAM83EQ2M2I3 478 aa7.05□□□□□ -1.28
CLK1-215ENST00000621181 EXOC3L2Q2M3D2 409 aa7.05□□□□□ -1.28
CLK1-215ENST00000621181 TUSC1Q2TAM9 212 aa7.05□□□□□ -1.28
CLK1-215ENST00000621181 UGT3A2Q3SY77 523 aa7.05□□□□□ -1.28
CLK1-215ENST00000621181 RAET1LQ5VY80 246 aa7.05□□□□□ -1.28
CLK1-215ENST00000621181 FAM180BQ6P0A1 224 aa7.05□□□□□ -1.28
CLK1-215ENST00000621181 SLC48A1Q6P1K1 146 aa7.05□□□□□ -1.28
CLK1-215ENST00000621181 HACD2Q6Y1H2 254 aa7.05□□□□□ -1.28
CLK1-215ENST00000621181 L3MBTL4Q8NA19 623 aa7.05□□□□□ -1.28
CLK1-215ENST00000621181 OR4K17Q8NGC6 315 aa7.05□□□□□ -1.28
CLK1-215ENST00000621181 CEP70Q8NHQ1 597 aa7.05□□□□□ -1.28
CLK1-215ENST00000621181 RHEBL1Q8TAI7 183 aa7.05□□□□□ -1.28
CLK1-215ENST00000621181 L3HYPDHQ96EM0 354 aa7.05□□□□□ -1.28
CLK1-215ENST00000621181 MARK4Q96L34 752 aa7.05□□□□□ -1.28
CLK1-215ENST00000621181 PPP1R36Q96LQ0 422 aa7.05□□□□□ -1.28
CLK1-215ENST00000621181 CDK15Q96Q40 435 aa7.05□□□□□ -1.28
CLK1-215ENST00000621181 PKP2Q99959 881 aa7.05□□□□□ -1.28
CLK1-215ENST00000621181 ZNF696Q9H7X3 374 aa7.05□□□□□ -1.28
CLK1-215ENST00000621181 ADAM29Q9UKF5 820 aa7.05□□□□□ -1.28
CLK1-215ENST00000621181 PSME2Q9UL46 239 aa7.05□□□□□ -1.28
CLK1-215ENST00000621181 RAB26Q9ULW5 256 aa7.05□□□□□ -1.28
CLK1-215ENST00000621181 PCDHGB4Q9UN71 923 aa7.05□□□□□ -1.28
CLK1-215ENST00000621181 PCDHGB5Q9Y5G0 923 aa7.05□□□□□ -1.28
CLK1-215ENST00000621181 TNPO3Q9Y5L0 923 aaKnown RBP7.05□□□□□ -1.28
CLK1-215ENST00000621181 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.04□□□□□ -1.28
CLK1-215ENST00000621181 TCRBV3S1A0A5B6 114 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 C1orf226A1L170 272 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 H0YJX3 145 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 SEC14L5O43304 696 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 EMC8O43402 210 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 ZIC3O60481 467 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 CLDN9O95484 217 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 CBX7O95931 251 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 IFNA2P01563 188 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 TFAP2AP05549 437 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 CD8BP10966 210 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 PEPDP12955 493 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 IMPDH1P20839 514 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 GSTT1P30711 240 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 MSX2P35548 267 aaPredicted RBP7.04□□□□□ -1.28
CLK1-215ENST00000621181 ALDH9A1P49189 494 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 EMDP50402 254 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 NR1H2P55055 460 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 EEFSECP57772 596 aaKnown RBP7.04□□□□□ -1.28
CLK1-215ENST00000621181 PSME3P61289 254 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 MRPS22P82650 360 aaKnown RBP7.04□□□□□ -1.28
CLK1-215ENST00000621181 TNK1Q13470 666 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 APOFQ13790 326 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 VEZF1Q14119 521 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 FLOT2Q14254 428 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 FGFBP1Q14512 234 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 SQLEQ14534 574 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 ACAP2Q15057 778 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 PON3Q15166 354 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 LTB4RQ15722 352 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 MMEL1Q495T6 779 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 TRMT12Q53H54 448 aaKnown RBP7.04□□□□□ -1.28
CLK1-215ENST00000621181 UNC50Q53HI1 259 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 BEX5Q5H9J7 111 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 FRG2Q64ET8 278 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 HMBOX1Q6NT76 420 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 KLC3Q6P597 504 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 ZNF704Q6ZNC4 412 aaPredicted RBP7.04□□□□□ -1.28
CLK1-215ENST00000621181 LARP4Q71RC2 724 aaKnown RBP eCLIP7.04□□□□□ -1.28
CLK1-215ENST00000621181 ARPINQ7Z6K5 226 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 CCNYL1Q8N7R7 359 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 ZNF610Q8N9Z0 462 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 MAPK1IP1LQ8NDC0 245 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 BHLHE22Q8NFJ8 381 aaPredicted RBP7.04□□□□□ -1.28
CLK1-215ENST00000621181 FNDC9Q8TBE3 224 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 FIG4Q92562 907 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 SLCO4A1Q96BD0 722 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 CCDC126Q96EE4 140 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 FRG2BQ96QU4 278 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms