RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 GMPR2Q9P2T1 348 aaKnown RBP6.78□□□□□ -1.32
COLCA1-205ENST00000620864 SARDHQ9UL12 918 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 A0A0U1RQJ8 604 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 hCG_1807616A0A1W2PRN6 198 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 WASH4PA8MWX3 477 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 YY2O15391 372 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 DTYMKP23919 212 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 PDGFRLQ15198 375 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 SF3B4Q15427 424 aaKnown RBP eCLIP6.78□□□□□ -1.32
COLCA1-205ENST00000620864 MEP1BQ16820 701 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 KDF1Q8NAX2 398 aaPredicted RBP6.78□□□□□ -1.32
COLCA1-205ENST00000620864 OR51T1Q8NGJ9 327 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 OR5D14Q8NGL3 314 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 OR51Q1Q8NH59 317 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 OR5W2Q8NH69 310 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 OR5AK3PQ8NH89 298 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 RHOXF1Q8NHV9 184 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 M1APQ8TC57 530 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 PHYHIPQ92561 330 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 TMEM18Q96B42 140 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 CDKN2AIPNLQ96HQ2 116 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 METTL2AQ96IZ6 378 aaKnown RBP6.78□□□□□ -1.32
COLCA1-205ENST00000620864 PRAP1Q96NZ9 151 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 NUDT16L1Q9BRJ7 211 aaKnown RBP6.78□□□□□ -1.32
COLCA1-205ENST00000620864 SLC2A4RGQ9NR83 387 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 TESQ9UGI8 421 aaKnown RBP6.78□□□□□ -1.32
COLCA1-205ENST00000620864 ADAMTS6Q9UKP5 1117 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 AK6Q9Y3D8 172 aaKnown RBP6.78□□□□□ -1.32
COLCA1-205ENST00000620864 OARD1Q9Y530 152 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 A0A087WUU8 490 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 FABP1P07148 127 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 CLCNKBP51801 687 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 STC1P52823 247 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 SUMO1P63165 101 aaKnown RBP6.78□□□□□ -1.32
COLCA1-205ENST00000620864 MLLT11Q13015 90 aaPredicted RBP6.78□□□□□ -1.32
COLCA1-205ENST00000620864 FAM74A1Q5RGS3 127 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 VARS2Q5ST30 1063 aaKnown RBP6.78□□□□□ -1.32
COLCA1-205ENST00000620864 CILP2Q8IUL8 1156 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 IL17RCQ8NAC3 791 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 OR4C5Q8NGB2 326 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 OR52H1Q8NGJ2 320 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 OR51L1Q8NGJ5 315 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 ASB17Q8WXJ9 295 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 TRMT2BQ96GJ1 504 aaKnown RBP6.78□□□□□ -1.32
COLCA1-205ENST00000620864 MED18Q9BUE0 208 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 SFXN1Q9H9B4 322 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 REV1Q9UBZ9 1251 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 INTS6Q9UL03 887 aaKnown RBP6.78□□□□□ -1.32
COLCA1-205ENST00000620864 ZFP37Q9Y6Q3 630 aaPredicted RBP6.78□□□□□ -1.32
COLCA1-205ENST00000620864 C10orf71Q711Q0 1435 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 C1orf226A1L170 272 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 YKT6O15498 198 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 GPRIN2O60269 458 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 SULT1C4O75897 302 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 APBB3O95704 486 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 ADRB1P08588 477 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 PNMTP11086 282 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 HOXB2P14652 356 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 RAB11AP62491 216 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 SPCS2Q15005 226 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.78□□□□□ -1.32
COLCA1-205ENST00000620864 PAGE3Q5JUK9 113 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 C6orf136Q5SQH8 315 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 DCBLD1Q8N8Z6 715 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 NKX6-2Q9C056 277 aaPredicted RBP6.78□□□□□ -1.32
COLCA1-205ENST00000620864 CTPS2Q9NRF8 586 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 AGPAT4Q9NRZ5 378 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 PIGVQ9NUD9 493 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 NDRG3Q9UGV2 375 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 ETV7Q9Y603 341 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 MYH7BA7E2Y1 1941 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 LRIT2A6NDA9 550 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 ZNF587BE7ETH6 402 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 UNGP13051 313 aaPredicted RBP6.78□□□□□ -1.32
COLCA1-205ENST00000620864 PRDX3P30048 256 aaKnown RBP6.78□□□□□ -1.32
COLCA1-205ENST00000620864 BDKRB1P46663 353 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 TNK1Q13470 666 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 VAMP3Q15836 100 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 CYP27C1Q4G0S4 372 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 FAM182AQ5T1J6 154 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 OR6F1Q8NGZ6 308 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 RAB3CQ96E17 227 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 SLC39A13Q96H72 371 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 NECTIN4Q96NY8 510 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 SORCS2Q96PQ0 1159 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 MPPED1O15442 326 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 ALX3O95076 343 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 NSA2O95478 260 aaKnown RBP6.77□□□□□ -1.33
COLCA1-205ENST00000620864 HLA-AP01891 365 aaKnown RBP6.77□□□□□ -1.33
COLCA1-205ENST00000620864 MAOBP27338 520 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 TIA1P31483 386 aaKnown RBP eCLIP6.77□□□□□ -1.33
COLCA1-205ENST00000620864 BTG1P62324 171 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 GLB1L2Q8IW92 636 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 OR9A2Q8NGT5 310 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 CDX2Q99626 313 aaPredicted RBP6.77□□□□□ -1.33
COLCA1-205ENST00000620864 ALG8Q9BVK2 526 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 SLC25A32Q9H2D1 315 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 FBXL12Q9NXK8 326 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 PCDHB10Q9UN67 800 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 B3GALT1Q9Y5Z6 326 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms