RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 MPC2O95563 127 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 LGI1O95970 557 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 RAF1P04049 648 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 ANXA2P07355 339 aaKnown RBP6.51□□□□□ -1.37
NEDD9-216ENST00000620854 TBXA2RP21731 343 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 IRS1P35568 1242 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 GNALP38405 381 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 ACTR1BP42025 376 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 MAP2K6P52564 334 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 ACTR1AP61163 376 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 ILF3Q12906 894 aaKnown RBP eCLIP6.51□□□□□ -1.373e-10■■■□□ 16.4
NEDD9-216ENST00000620854 TPBGQ13641 420 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 GFOD2Q3B7J2 385 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 LGALSLQ3ZCW2 172 aaPredicted RBP6.51□□□□□ -1.37
NEDD9-216ENST00000620854 EOGTQ5NDL2 527 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 MPP7Q5T2T1 576 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 TMEM65Q6PI78 240 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 GAREM2Q75VX8 874 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 SERPINA12Q8IW75 414 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 CCDC116Q8IYX3 515 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 CPXM2Q8N436 756 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 LNX2Q8N448 690 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 ZNF527Q8NB42 609 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 GALNT6Q8NCL4 622 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 C16orf58Q96GQ5 468 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 SHDQ96IW2 340 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 ZSWIM3Q96MP5 696 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 GPER1Q99527 375 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 ARHGAP9Q9BRR9 750 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 POLDIP3Q9BY77 421 aaKnown RBP6.51□□□□□ -1.37
NEDD9-216ENST00000620854 TCF7L1Q9HCS4 588 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 ZFP64Q9NPA5 681 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 WSB2Q9NYS7 404 aaPredicted RBP6.51□□□□□ -1.37
NEDD9-216ENST00000620854 AKAP7Q9P0M2 348 aaPredicted RBP6.51□□□□□ -1.37
NEDD9-216ENST00000620854 HCN3Q9P1Z3 774 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 MBD2Q9UBB5 411 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 FKBP7Q9Y680 259 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 SIRT4Q9Y6E7 314 aaPredicted RBP6.51□□□□□ -1.37
NEDD9-216ENST00000620854 HELZP42694 1942 aaKnown RBP6.51□□□□□ -1.37
NEDD9-216ENST00000620854 TCRBP04435 133 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 GYPBP06028 91 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 FAM157BP0CG42 384 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 MPC1LP0DKB6 136 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 PTHLHP12272 177 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 CMPK1P30085 196 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 MPIP34949 423 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 TRIM23P36406 574 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 KCNJ5P48544 419 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 KHKP50053 298 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 CLDN2P57739 230 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 TEKQ02763 1124 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 SCRN3Q0VDG4 424 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 OCLNQ16625 522 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 SLC25A35Q3KQZ1 300 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 ZNF805Q5CZA5 627 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 C1orf53Q5VUE5 145 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 PLBD1Q6P4A8 553 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 SLC36A4Q6YBV0 504 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 TAF8Q7Z7C8 310 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 KIAA0907Q7Z7F0 614 aaPredicted RBP6.5□□□□□ -1.37
NEDD9-216ENST00000620854 OR8K3Q8NH51 312 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 COQ8AQ8NI60 647 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 FCRL1Q96LA6 429 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 COQ10AQ96MF6 247 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 PIGUQ9H490 435 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 WDR26Q9H7D7 661 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 MRPS30Q9NP92 439 aaKnown RBP6.5□□□□□ -1.37
NEDD9-216ENST00000620854 RABL2AQ9UBK7 228 aaPredicted RBP6.5□□□□□ -1.37
NEDD9-216ENST00000620854 CACNG2Q9Y698 323 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 SPAG17Q6Q759 2223 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 FXYD6-FXYD2A0A087WZ82 144 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 A0A1W2PS29 197 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 AGAP14A8MT82 685 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 K7ESM1 405 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 UGDHO60701 494 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 SLCO2B1O94956 709 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 SRPRAP08240 638 aaKnown RBP6.5□□□□□ -1.37
NEDD9-216ENST00000620854 SLC6A1P30531 599 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 AKT2P31751 481 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 CCR8P51685 355 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 TSPAN5P62079 268 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 DGCR2P98153 550 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 DEFA5Q01523 94 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 TAP2Q03519 686 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 EIF2B5Q13144 721 aaKnown RBP6.5□□□□□ -1.37
NEDD9-216ENST00000620854 ATXN7L3Q14CW9 347 aaPredicted RBP6.5□□□□□ -1.37
NEDD9-216ENST00000620854 TCEAL5Q5H9L2 206 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 CDKL4Q5MAI5 379 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 FAAP20Q6NZ36 180 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 CEACAM19Q7Z692 300 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 NKAIN4Q8IVV8 208 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 SIAH3Q8IW03 269 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 ADGRF3Q8IZF5 1079 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 ZNF687Q8N1G0 1237 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 ZNF676Q8N7Q3 588 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 FAM181AQ8N9Y4 354 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 CYB561A3Q8NBI2 242 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 OR4D9Q8NGE8 314 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 OR51A7Q8NH64 312 aa6.5□□□□□ -1.37
NEDD9-216ENST00000620854 SLC5A11Q8WWX8 675 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms