RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-223	ENST00000618944	FGF9	P31371	208 aa	Predicted RBP	10.4	□□□□□ -0.74
TP53-223	ENST00000618944	VSX2	P58304	361 aa	Predicted RBP	10.4	□□□□□ -0.74
TP53-223	ENST00000618944	RPS7	P62081	194 aa	Known RBP	10.4	□□□□□ -0.74
TP53-223	ENST00000618944	P2RY14	Q15391	338 aa		10.4	□□□□□ -0.74
TP53-223	ENST00000618944	ATAD3C	Q5T2N8	411 aa		10.4	□□□□□ -0.74
TP53-223	ENST00000618944	FHL5	Q5TD97	284 aa		10.4	□□□□□ -0.74
TP53-223	ENST00000618944	CNIH2	Q6PI25	160 aa		10.4	□□□□□ -0.74
TP53-223	ENST00000618944	CD200R1L	Q6Q8B3	271 aa		10.4	□□□□□ -0.74
TP53-223	ENST00000618944	TMEM92	Q6UXU6	159 aa		10.4	□□□□□ -0.74
TP53-223	ENST00000618944	THSD4	Q6ZMP0	1018 aa		10.4	□□□□□ -0.74
TP53-223	ENST00000618944	DGAT2L6	Q6ZPD8	337 aa		10.4	□□□□□ -0.74
TP53-223	ENST00000618944	GLCCI1	Q86VQ1	547 aa		10.4	□□□□□ -0.74
TP53-223	ENST00000618944	SAMD14	Q8IZD0	417 aa	Predicted RBP	10.4	□□□□□ -0.74
TP53-223	ENST00000618944	ARIH2OS	Q8N7S6	290 aa		10.4	□□□□□ -0.74
TP53-223	ENST00000618944	TMEM99	Q8N816	258 aa		10.4	□□□□□ -0.74
TP53-223	ENST00000618944	OR13C2	Q8NGS9	318 aa		10.4	□□□□□ -0.74
TP53-223	ENST00000618944	OR6F1	Q8NGZ6	308 aa		10.4	□□□□□ -0.74
TP53-223	ENST00000618944	AP3S1	Q92572	193 aa		10.4	□□□□□ -0.74
TP53-223	ENST00000618944	ZNF486	Q96H40	463 aa	Predicted RBP	10.4	□□□□□ -0.74
TP53-223	ENST00000618944	HS6ST2	Q96MM7	605 aa		10.4	□□□□□ -0.74
TP53-223	ENST00000618944	ZNF350	Q9GZX5	532 aa		10.4	□□□□□ -0.74
TP53-223	ENST00000618944	TP63	Q9H3D4	680 aa	Predicted RBP	10.4	□□□□□ -0.74
TP53-223	ENST00000618944	CLDND1	Q9NY35	253 aa		10.4	□□□□□ -0.74
TP53-223	ENST00000618944	MAT2B	Q9NZL9	334 aa		10.4	□□□□□ -0.74
TP53-223	ENST00000618944	USP36	Q9P275	1121 aa	Known RBP	10.4	□□□□□ -0.74
TP53-223	ENST00000618944	PCOLCE2	Q9UKZ9	415 aa		10.4	□□□□□ -0.74
TP53-223	ENST00000618944	TRAV27	A0A087WT01	109 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944	AKAP8	O43823	692 aa	Known RBP	10.39	□□□□□ -0.75
TP53-223	ENST00000618944	GPR75	O95800	540 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944	DBI	P07108	87 aa	Known RBP	10.39	□□□□□ -0.75
TP53-223	ENST00000618944	SAG	P10523	405 aa	Predicted RBP	10.39	□□□□□ -0.75
TP53-223	ENST00000618944	CLU	P10909	449 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944	TYRP1	P17643	537 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944	HNRNPA2B1	P22626	353 aa	Known RBP	10.39	□□□□□ -0.75
TP53-223	ENST00000618944	CTH	P32929	405 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944	FZD5	Q13467	585 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944	EIPR1	Q53HC9	387 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944	FAM181A	Q8N9Y4	354 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944	OR10H4	Q8NGA5	316 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944	EFHD2	Q96C19	240 aa	Predicted RBP	10.39	□□□□□ -0.75
TP53-223	ENST00000618944	SENP5	Q96HI0	755 aa	Predicted RBP	10.39	□□□□□ -0.75
TP53-223	ENST00000618944	ATF6B	Q99941	703 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944	IFT27	Q9BW83	186 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944	SLC22A4	Q9H015	551 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944	ZNF223	Q9UK11	482 aa	Predicted RBP	10.39	□□□□□ -0.75
TP53-223	ENST00000618944	ZNF221	Q9UK13	617 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944	N6AMT1	Q9Y5N5	214 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944		A0A0C4DFX4	3053 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944	CDHR4	A6H8M9	788 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944	CCDC182	A6NF36	153 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944	CYR61	O00622	381 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944	PLA2G10	O15496	165 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944	IGHA1	P01876	353 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944	HLA-DPB1	P04440	258 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944	HOXC4	P09017	264 aa	Predicted RBP	10.39	□□□□□ -0.75
TP53-223	ENST00000618944	NID1	P14543	1247 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944	ZNF10	P21506	573 aa	Predicted RBP	10.39	□□□□□ -0.75
TP53-223	ENST00000618944	TPMT	P51580	245 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944	IFITM2	Q01629	132 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944	IL18	Q14116	193 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	10.39	□□□□□ -0.75
TP53-223	ENST00000618944	PRICKLE4	Q2TBC4	344 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944	DEFB110	Q30KQ9	67 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944	VASN	Q6EMK4	673 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944	TMEM91	Q6ZNR0	172 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944	MEPCE	Q7L2J0	689 aa	Known RBP	10.39	□□□□□ -0.75
TP53-223	ENST00000618944	ACBD7	Q8N6N7	88 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944	GDPD1	Q8N9F7	314 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944	CYB561A3	Q8NBI2	242 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944	OR52L1	Q8NGH7	329 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944	PTP4A1	Q93096	173 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944	TP53INP1	Q96A56	240 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944	PTCHD1	Q96NR3	888 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944	CDCA3	Q99618	268 aa	Predicted RBP	10.39	□□□□□ -0.75
TP53-223	ENST00000618944	CTRC	Q99895	268 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944	BEX2	Q9BXY8	128 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944	KRCC1	Q9NPI7	259 aa	Predicted RBP	10.39	□□□□□ -0.75
TP53-223	ENST00000618944	MED17	Q9NVC6	651 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944	CPNE7	Q9UBL6	633 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944	FBXL4	Q9UKA2	621 aa		10.39	□□□□□ -0.75
TP53-223	ENST00000618944	OR2W5	A6NFC9	320 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	BHLHE40	O14503	412 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	GNB5	O14775	395 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	CHST10	O43529	356 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	RFPL3	O75679	317 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	THBS1	P07996	1170 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	SLC2A2	P11168	524 aa	Predicted RBP	10.38	□□□□□ -0.75
TP53-223	ENST00000618944	TBXA2R	P21731	343 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	C1orf61	Q13536	156 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	TBRG1	Q3YBR2	411 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	EOGT	Q5NDL2	527 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944		Q8N402	240 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	CSNK1A1L	Q8N752	337 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	CDRT4	Q8N9R6	151 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	OR13H1	Q8NG92	308 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	OR4N2	Q8NGD1	307 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	BRIX1	Q8TDN6	353 aa	Known RBP	10.38	□□□□□ -0.75
TP53-223	ENST00000618944	UBASH3B	Q8TF42	649 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	CNOT9	Q92600	299 aa	Known RBP	10.38	□□□□□ -0.75
TP53-223	ENST00000618944	BPIFA2	Q96DR5	249 aa		10.38	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms