RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 MFSD12Q6NUT3 480 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 FAM86B1Q8N7N1 296 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 SLC37A3Q8NCC5 494 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 OR4K13Q8NH42 304 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 LRRC61Q9BV99 259 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 ULBP3Q9BZM4 244 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 OR10A5Q9H207 317 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 B3GAT2Q9NPZ5 323 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 B4GALT7Q9UBV7 327 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 MMACHCQ9Y4U1 282 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 EPOPA6NHQ4 379 aa12.96□□□□□ -0.33
CIITA-213ENST00000618327 RLN2P04090 185 aa12.96□□□□□ -0.33
CIITA-213ENST00000618327 CD63P08962 238 aa12.96□□□□□ -0.33
CIITA-213ENST00000618327 ACTC1P68032 377 aa12.96□□□□□ -0.33
CIITA-213ENST00000618327 ACTA1P68133 377 aa12.96□□□□□ -0.33
CIITA-213ENST00000618327 C4orf46Q504U0 113 aa12.96□□□□□ -0.33
CIITA-213ENST00000618327 PLBD1Q6P4A8 553 aa12.96□□□□□ -0.33
CIITA-213ENST00000618327 Q7L0L9 218 aa12.96□□□□□ -0.33
CIITA-213ENST00000618327 P4HA3Q7Z4N8 544 aa12.96□□□□□ -0.33
CIITA-213ENST00000618327 KIAA0907Q7Z7F0 614 aaPredicted RBP12.96□□□□□ -0.33
CIITA-213ENST00000618327 ARMC10Q8N2F6 343 aa12.96□□□□□ -0.33
CIITA-213ENST00000618327 SLC16A11Q8NCK7 471 aa12.96□□□□□ -0.33
CIITA-213ENST00000618327 CADM4Q8NFZ8 388 aa12.96□□□□□ -0.33
CIITA-213ENST00000618327 OR1F2PQ96R84 312 aa12.96□□□□□ -0.33
CIITA-213ENST00000618327 TM9SF2Q99805 663 aa12.96□□□□□ -0.33
CIITA-213ENST00000618327 USP36Q9P275 1121 aaKnown RBP12.96□□□□□ -0.33
CIITA-213ENST00000618327 SLC6A14Q9UN76 642 aa12.96□□□□□ -0.33
CIITA-213ENST00000618327 PCDHGA8Q9Y5G5 932 aa12.96□□□□□ -0.33
CIITA-213ENST00000618327 KANTRA0A1W2PQU2 76 aa12.96□□□□□ -0.33
CIITA-213ENST00000618327 FXYD1O00168 92 aa12.96□□□□□ -0.33
CIITA-213ENST00000618327 CDRT1O95170 752 aa12.96□□□□□ -0.33
CIITA-213ENST00000618327 HTR1AP08908 422 aa12.96□□□□□ -0.33
CIITA-213ENST00000618327 F8A1P23610 371 aa12.96□□□□□ -0.33
CIITA-213ENST00000618327 S100A2P29034 98 aa12.96□□□□□ -0.33
CIITA-213ENST00000618327 GGT2P36268 569 aa12.96□□□□□ -0.33
CIITA-213ENST00000618327 SLC6A9P48067 706 aa12.96□□□□□ -0.33
CIITA-213ENST00000618327 OR12D2P58182 307 aa12.96□□□□□ -0.33
CIITA-213ENST00000618327 PRSS48Q7RTY5 328 aa12.96□□□□□ -0.33
CIITA-213ENST00000618327 MEX3DQ86XN8 651 aaKnown RBP12.96□□□□□ -0.33
CIITA-213ENST00000618327 CCDC28AQ8IWP9 274 aa12.96□□□□□ -0.33
CIITA-213ENST00000618327 ACBD7Q8N6N7 88 aa12.96□□□□□ -0.33
CIITA-213ENST00000618327 INO80EQ8NBZ0 244 aaPredicted RBP12.96□□□□□ -0.33
CIITA-213ENST00000618327 SLC6A20Q9NP91 592 aa12.96□□□□□ -0.33
CIITA-213ENST00000618327 CLEC1BQ9P126 229 aa12.96□□□□□ -0.33
CIITA-213ENST00000618327 ST14Q9Y5Y6 855 aa12.96□□□□□ -0.33
CIITA-213ENST00000618327 ALG5Q9Y673 324 aa12.96□□□□□ -0.33
CIITA-213ENST00000618327 MYO16Q9Y6X6 1858 aa12.96□□□□□ -0.34
CIITA-213ENST00000618327 C7orf72A4D263 438 aa12.96□□□□□ -0.34
CIITA-213ENST00000618327 LMO7DNF2Z398 122 aa12.96□□□□□ -0.34
CIITA-213ENST00000618327 ZNF749O43361 778 aa12.96□□□□□ -0.34
CIITA-213ENST00000618327 FMO6PO60774 539 aa12.96□□□□□ -0.34
CIITA-213ENST00000618327 CD1CP29017 333 aa12.96□□□□□ -0.34
CIITA-213ENST00000618327 ANKDD1AQ495B1 522 aa12.96□□□□□ -0.34
CIITA-213ENST00000618327 FRMPD2BQ6IN97 320 aa12.96□□□□□ -0.34
CIITA-213ENST00000618327 UGT2A3Q6UWM9 527 aa12.96□□□□□ -0.34
CIITA-213ENST00000618327 TMEM64Q6YI46 380 aa12.96□□□□□ -0.34
CIITA-213ENST00000618327 PLEKHG7Q6ZR37 379 aa12.96□□□□□ -0.34
CIITA-213ENST00000618327 SPRED1Q7Z699 444 aa12.96□□□□□ -0.34
CIITA-213ENST00000618327 GATA6Q92908 595 aa12.96□□□□□ -0.34
CIITA-213ENST00000618327 ZNF578Q96N58 590 aaPredicted RBP12.96□□□□□ -0.34
CIITA-213ENST00000618327 SLC30A2Q9BRI3 323 aa12.96□□□□□ -0.34
CIITA-213ENST00000618327 EVA1AQ9H8M9 152 aa12.96□□□□□ -0.34
CIITA-213ENST00000618327 TRBV11-1A0A0K0K1C0 115 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 L7N2F9 121 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 ZFAND5O76080 213 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 MAOAP21397 527 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 CA5AP35218 305 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 CLRN1P58418 232 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 TFF2Q03403 129 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 OR1Q1Q15612 314 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 LIPKQ5VXJ0 399 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 ANKRD53Q8N9V6 530 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 GDF15Q99988 308 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 SH2B3Q9UQQ2 575 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 C5orf51A6NDU8 294 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 ZSCAN5BA6NJL1 495 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 H7C2Y5 167 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 ITGAMP11215 1152 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 PRKCAP17252 672 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 FUT1P19526 365 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 CD22P20273 847 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 HSD17B7P56937 341 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 GNG2P59768 71 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 CTXN1P60606 82 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 KCNAB1Q14722 419 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 ZNF431Q8TF32 576 aaPredicted RBP12.95□□□□□ -0.34
CIITA-213ENST00000618327 NSMAFQ92636 917 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 BPIFA2Q96DR5 249 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 FUZQ9BT04 418 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 DPAGT1Q9H3H5 408 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 FOLH1BQ9HBA9 442 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 OLAHQ9NV23 265 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 A0A1B0GX78 115 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 GALR3O60755 368 aaPredicted RBP12.95□□□□□ -0.34
CIITA-213ENST00000618327 HOXC4P09017 264 aaPredicted RBP12.95□□□□□ -0.34
CIITA-213ENST00000618327 PRAMEF17Q5VTA0 474 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 CCDC107Q8WV48 283 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 THAP4Q8WY91 577 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 RNF121Q9H920 327 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 ASB6Q9NWX5 421 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms