RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 C14orf105Q9NVL8 296 aa16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 A0A1B0GX78 115 aa16■□□□□ 0.15
PCDHGC3-205ENST00000617641 CNOT3O75175 753 aaKnown RBP16■□□□□ 0.15
PCDHGC3-205ENST00000617641 CH25HO95992 272 aa16■□□□□ 0.15
PCDHGC3-205ENST00000617641 ACAA2P42765 397 aaKnown RBP16■□□□□ 0.15
PCDHGC3-205ENST00000617641 ATP12AP54707 1039 aa16■□□□□ 0.15
PCDHGC3-205ENST00000617641 SLC37A1P57057 533 aa16■□□□□ 0.15
PCDHGC3-205ENST00000617641 RHAGQ02094 409 aa16■□□□□ 0.15
PCDHGC3-205ENST00000617641 FGFBP1Q14512 234 aa16■□□□□ 0.15
PCDHGC3-205ENST00000617641 NDUFAF6Q330K2 333 aa16■□□□□ 0.15
PCDHGC3-205ENST00000617641 MED25Q71SY5 747 aa16■□□□□ 0.15
PCDHGC3-205ENST00000617641 OR7G1Q8NGA0 311 aa16■□□□□ 0.15
PCDHGC3-205ENST00000617641 OR2I1PQ8NGU4 316 aa16■□□□□ 0.15
PCDHGC3-205ENST00000617641 TBC1D15Q8TC07 691 aa16■□□□□ 0.15
PCDHGC3-205ENST00000617641 TMEM163Q8TC26 289 aa16■□□□□ 0.15
PCDHGC3-205ENST00000617641 EDAQ92838 391 aa16■□□□□ 0.15
PCDHGC3-205ENST00000617641 OSTF1Q92882 214 aa16■□□□□ 0.15
PCDHGC3-205ENST00000617641 CRELD1Q96HD1 420 aa16■□□□□ 0.15
PCDHGC3-205ENST00000617641 BCL7BQ9BQE9 202 aa16■□□□□ 0.15
PCDHGC3-205ENST00000617641 KRCC1Q9NPI7 259 aaPredicted RBP16■□□□□ 0.15
PCDHGC3-205ENST00000617641 IL20Q9NYY1 176 aa16■□□□□ 0.15
PCDHGC3-205ENST00000617641 A0A1B0GWA3 101 aa16■□□□□ 0.15
PCDHGC3-205ENST00000617641 IFI30P13284 250 aa16■□□□□ 0.15
PCDHGC3-205ENST00000617641 MAKP20794 623 aa16■□□□□ 0.15
PCDHGC3-205ENST00000617641 NCS1P62166 190 aa16■□□□□ 0.15
PCDHGC3-205ENST00000617641 CCL7P80098 99 aa16■□□□□ 0.15
PCDHGC3-205ENST00000617641 DOC2BQ14184 412 aa16■□□□□ 0.15
PCDHGC3-205ENST00000617641 SLC25A30Q5SVS4 291 aa16■□□□□ 0.15
PCDHGC3-205ENST00000617641 ZNF613Q6PF04 617 aa16■□□□□ 0.15
PCDHGC3-205ENST00000617641 C9orf43Q8TAL5 461 aaPredicted RBP16■□□□□ 0.15
PCDHGC3-205ENST00000617641 EFHD2Q96C19 240 aaPredicted RBP16■□□□□ 0.15
PCDHGC3-205ENST00000617641 SAMD8Q96LT4 415 aa16■□□□□ 0.15
PCDHGC3-205ENST00000617641 GAREM1Q9H706 876 aa16■□□□□ 0.15
PCDHGC3-205ENST00000617641 CLCA3PQ9Y6N3 262 aa16■□□□□ 0.15
PCDHGC3-205ENST00000617641 CDH10Q9Y6N8 788 aa16■□□□□ 0.15
PCDHGC3-205ENST00000617641 ADAMTS9Q9P2N4 1935 aa16■□□□□ 0.15
PCDHGC3-205ENST00000617641 FER1L5A0AVI2 2057 aa16■□□□□ 0.15
PCDHGC3-205ENST00000617641 NUP210LQ5VU65 1888 aa15.99■□□□□ 0.15
PCDHGC3-205ENST00000617641 A0A0B4J2E0 115 aa15.99■□□□□ 0.15
PCDHGC3-205ENST00000617641 A0A1B0GX12 115 aa15.99■□□□□ 0.15
PCDHGC3-205ENST00000617641 A0A1W2PQM1 296 aa15.99■□□□□ 0.15
PCDHGC3-205ENST00000617641 HSMCR30P0CW71 290 aa15.99■□□□□ 0.15
PCDHGC3-205ENST00000617641 PNLIPP16233 465 aa15.99■□□□□ 0.15
PCDHGC3-205ENST00000617641 SIGLEC14Q08ET2 396 aa15.99■□□□□ 0.15
PCDHGC3-205ENST00000617641 ARMCX4Q5H9R4 360 aa15.99■□□□□ 0.15
PCDHGC3-205ENST00000617641 MEDAGQ5VYS4 303 aa15.99■□□□□ 0.15
PCDHGC3-205ENST00000617641 SLC38A2Q96QD8 506 aa15.99■□□□□ 0.15
PCDHGC3-205ENST00000617641 SYNDIG1Q9H7V2 258 aa15.99■□□□□ 0.15
PCDHGC3-205ENST00000617641 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.99■□□□□ 0.15
PCDHGC3-205ENST00000617641 UNC119BA6NIH7 251 aa15.99■□□□□ 0.15
PCDHGC3-205ENST00000617641 SLC22A1O15245 554 aa15.99■□□□□ 0.15
PCDHGC3-205ENST00000617641 DDAH2O95865 285 aa15.99■□□□□ 0.15
PCDHGC3-205ENST00000617641 RPLP0P05388 317 aaKnown RBP15.99■□□□□ 0.15
PCDHGC3-205ENST00000617641 TGFBR1P36897 503 aa15.99■□□□□ 0.15
PCDHGC3-205ENST00000617641 MED22Q15528 200 aa15.99■□□□□ 0.15
PCDHGC3-205ENST00000617641 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.99■□□□□ 0.15
PCDHGC3-205ENST00000617641 C1QTNF12Q5T7M4 302 aa15.99■□□□□ 0.15
PCDHGC3-205ENST00000617641 HSDL2Q6YN16 418 aa15.99■□□□□ 0.15
PCDHGC3-205ENST00000617641 ZNF367Q7RTV3 350 aa15.99■□□□□ 0.15
PCDHGC3-205ENST00000617641 LAPTM4BQ86VI4 370 aa15.99■□□□□ 0.15
PCDHGC3-205ENST00000617641 RNF113BQ8IZP6 322 aaKnown RBP15.99■□□□□ 0.15
PCDHGC3-205ENST00000617641 SLC2A12Q8TD20 617 aa15.99■□□□□ 0.15
PCDHGC3-205ENST00000617641 TMEM80Q96HE8 168 aa15.99■□□□□ 0.15
PCDHGC3-205ENST00000617641 CLEC2DQ9UHP7 191 aa15.99■□□□□ 0.15
PCDHGC3-205ENST00000617641 PATE3B3GLJ2 98 aa15.98■□□□□ 0.15
PCDHGC3-205ENST00000617641 CKMT1AP12532 417 aa15.98■□□□□ 0.15
PCDHGC3-205ENST00000617641 GADD45AP24522 165 aa15.98■□□□□ 0.15
PCDHGC3-205ENST00000617641 PSMD4P55036 377 aaKnown RBP15.98■□□□□ 0.15
PCDHGC3-205ENST00000617641 PRKCDQ05655 676 aa15.98■□□□□ 0.15
PCDHGC3-205ENST00000617641 NSDHLQ15738 373 aa15.98■□□□□ 0.15
PCDHGC3-205ENST00000617641 PGGHGQ32M88 737 aa15.98■□□□□ 0.15
PCDHGC3-205ENST00000617641 SLC46A3Q7Z3Q1 461 aa15.98■□□□□ 0.15
PCDHGC3-205ENST00000617641 C1orf210Q8IVY1 113 aa15.98■□□□□ 0.15
PCDHGC3-205ENST00000617641 EID2Q8N6I1 236 aa15.98■□□□□ 0.15
PCDHGC3-205ENST00000617641 NXF5Q9H1B4 397 aaKnown RBP15.98■□□□□ 0.15
PCDHGC3-205ENST00000617641 EVA1AQ9H8M9 152 aa15.98■□□□□ 0.15
PCDHGC3-205ENST00000617641 SIDT1Q9NXL6 827 aaKnown RBP15.98■□□□□ 0.15
PCDHGC3-205ENST00000617641 CTSFQ9UBX1 484 aa15.98■□□□□ 0.15
PCDHGC3-205ENST00000617641 TCRBV16S1A1N1A0A5B0 115 aa15.97■□□□□ 0.15
PCDHGC3-205ENST00000617641 SYNDIG1LA6NDD5 238 aa15.97■□□□□ 0.15
PCDHGC3-205ENST00000617641 SERINC4A6NH21 518 aa15.97■□□□□ 0.15
PCDHGC3-205ENST00000617641 TOX3O15405 576 aaPredicted RBP15.97■□□□□ 0.15
PCDHGC3-205ENST00000617641 CHP2O43745 196 aa15.97■□□□□ 0.15
PCDHGC3-205ENST00000617641 DYRK3O43781 588 aa15.97■□□□□ 0.15
PCDHGC3-205ENST00000617641 CSTAP01040 98 aa15.97■□□□□ 0.15
PCDHGC3-205ENST00000617641 IGKV3-11P04433 115 aa15.97■□□□□ 0.15
PCDHGC3-205ENST00000617641 ZGLP1P0C6A0 271 aa15.97■□□□□ 0.15
PCDHGC3-205ENST00000617641 CSTF2P33240 577 aaKnown RBP eCLIP15.97■□□□□ 0.15
PCDHGC3-205ENST00000617641 ENTPD1P49961 510 aa15.97■□□□□ 0.15
PCDHGC3-205ENST00000617641 FOXL2P58012 376 aa15.97■□□□□ 0.15
PCDHGC3-205ENST00000617641 FXYD6P3P58550 94 aa15.97■□□□□ 0.15
PCDHGC3-205ENST00000617641 NCF4Q15080 339 aa15.97■□□□□ 0.15
PCDHGC3-205ENST00000617641 PRPF38BQ5VTL8 546 aaKnown RBP15.97■□□□□ 0.15
PCDHGC3-205ENST00000617641 SLC34A3Q8N130 599 aa15.97■□□□□ 0.15
PCDHGC3-205ENST00000617641 CADM2Q8N3J6 435 aa15.97■□□□□ 0.15
PCDHGC3-205ENST00000617641 ZNF721Q8TF20 911 aa15.97■□□□□ 0.15
PCDHGC3-205ENST00000617641 SLC46A1Q96NT5 459 aa15.97■□□□□ 0.15
PCDHGC3-205ENST00000617641 NECAB3Q96P71 396 aaPredicted RBP15.97■□□□□ 0.15
PCDHGC3-205ENST00000617641 TRIM2Q9C040 744 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms