RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 LASP1Q14847 261 aaKnown RBP18.54■□□□□ 0.56
TRAPPC3-208ENST00000616074 MLC1Q15049 377 aa18.54■□□□□ 0.56
TRAPPC3-208ENST00000616074 R3HCC1LQ7Z5L2 792 aaKnown RBP18.54■□□□□ 0.56
TRAPPC3-208ENST00000616074 STK32CQ86UX6 486 aa18.54■□□□□ 0.56
TRAPPC3-208ENST00000616074 DDIASQ8IXT1 998 aa18.54■□□□□ 0.56
TRAPPC3-208ENST00000616074 LILRA2Q8N149 483 aa18.54■□□□□ 0.56
TRAPPC3-208ENST00000616074 TWIST2Q8WVJ9 160 aa18.54■□□□□ 0.56
TRAPPC3-208ENST00000616074 ROBO4Q8WZ75 1007 aa18.54■□□□□ 0.56
TRAPPC3-208ENST00000616074 OSTF1Q92882 214 aa18.54■□□□□ 0.56
TRAPPC3-208ENST00000616074 CHMP6Q96FZ7 201 aa18.54■□□□□ 0.56
TRAPPC3-208ENST00000616074 STACQ99469 402 aa18.54■□□□□ 0.56
TRAPPC3-208ENST00000616074 BTBD2Q9BX70 525 aa18.54■□□□□ 0.56
TRAPPC3-208ENST00000616074 PPCSQ9HAB8 311 aa18.54■□□□□ 0.56
TRAPPC3-208ENST00000616074 FANCFQ9NPI8 374 aa18.54■□□□□ 0.56
TRAPPC3-208ENST00000616074 GIMAP2Q9UG22 337 aa18.54■□□□□ 0.56
TRAPPC3-208ENST00000616074 JMJD1CQ15652 2540 aa18.54■□□□□ 0.56
TRAPPC3-208ENST00000616074 USF3Q68DE3 2245 aa18.53■□□□□ 0.56
TRAPPC3-208ENST00000616074 PIP5K1BO14986 540 aa18.53■□□□□ 0.56
TRAPPC3-208ENST00000616074 SCAMP2O15127 329 aaKnown RBP18.53■□□□□ 0.56
TRAPPC3-208ENST00000616074 OIP5O43482 229 aa18.53■□□□□ 0.56
TRAPPC3-208ENST00000616074 CNOT4O95628 575 aaKnown RBP18.53■□□□□ 0.56
TRAPPC3-208ENST00000616074 HSPA4LO95757 839 aa18.53■□□□□ 0.56
TRAPPC3-208ENST00000616074 NID1P14543 1247 aa18.53■□□□□ 0.56
TRAPPC3-208ENST00000616074 PAX1P15863 534 aa18.53■□□□□ 0.56
TRAPPC3-208ENST00000616074 PSMB1P20618 241 aaKnown RBP18.53■□□□□ 0.56
TRAPPC3-208ENST00000616074 PCSK6P29122 969 aa18.53■□□□□ 0.56
TRAPPC3-208ENST00000616074 RNF144AP50876 292 aaPredicted RBP18.53■□□□□ 0.56
TRAPPC3-208ENST00000616074 ZNF844Q08AG5 666 aa18.53■□□□□ 0.56
TRAPPC3-208ENST00000616074 ZNF239Q16600 458 aaKnown RBP18.53■□□□□ 0.56
TRAPPC3-208ENST00000616074 UGT3A2Q3SY77 523 aa18.53■□□□□ 0.56
TRAPPC3-208ENST00000616074 OR7A2PQ8NGA2 310 aa18.53■□□□□ 0.56
TRAPPC3-208ENST00000616074 PHOSPHO1Q8TCT1 267 aa18.53■□□□□ 0.56
TRAPPC3-208ENST00000616074 RNF128Q8TEB7 428 aa18.53■□□□□ 0.56
TRAPPC3-208ENST00000616074 ABHD3Q8WU67 409 aa18.53■□□□□ 0.56
TRAPPC3-208ENST00000616074 TMEM171Q8WVE6 324 aa18.53■□□□□ 0.56
TRAPPC3-208ENST00000616074 TMEM204Q9BSN7 226 aa18.53■□□□□ 0.56
TRAPPC3-208ENST00000616074 SRXN1Q9BYN0 137 aa18.53■□□□□ 0.56
TRAPPC3-208ENST00000616074 OR10A4Q9H209 315 aa18.53■□□□□ 0.56
TRAPPC3-208ENST00000616074 DUSP22Q9NRW4 184 aa18.53■□□□□ 0.56
TRAPPC3-208ENST00000616074 GIN1Q9NXP7 522 aa18.53■□□□□ 0.56
TRAPPC3-208ENST00000616074 ATP6V1HQ9UI12 483 aa18.53■□□□□ 0.56
TRAPPC3-208ENST00000616074 GPR52Q9Y2T5 361 aa18.53■□□□□ 0.56
TRAPPC3-208ENST00000616074 FREM1Q5H8C1 2179 aa18.52■□□□□ 0.56
TRAPPC3-208ENST00000616074 NPIPA5A0A0B4J1W7 369 aa18.52■□□□□ 0.56
TRAPPC3-208ENST00000616074 NPIPA7E9PJI5 369 aa18.52■□□□□ 0.56
TRAPPC3-208ENST00000616074 EFNA2O43921 213 aa18.52■□□□□ 0.56
TRAPPC3-208ENST00000616074 FGF4P08620 206 aa18.52■□□□□ 0.56
TRAPPC3-208ENST00000616074 NPIPA8P0DM63 369 aa18.52■□□□□ 0.56
TRAPPC3-208ENST00000616074 ELK4P28324 431 aa18.52■□□□□ 0.56
TRAPPC3-208ENST00000616074 HPCAL1P37235 193 aa18.52■□□□□ 0.56
TRAPPC3-208ENST00000616074 EIF1P41567 113 aaKnown RBP18.52■□□□□ 0.56
TRAPPC3-208ENST00000616074 CARD18P57730 90 aa18.52■□□□□ 0.56
TRAPPC3-208ENST00000616074 GTF2IRD2BQ6EKJ0 949 aa18.52■□□□□ 0.56
TRAPPC3-208ENST00000616074 CBLN3Q6UW01 205 aa18.52■□□□□ 0.56
TRAPPC3-208ENST00000616074 LRIG3Q6UXM1 1119 aa18.52■□□□□ 0.56
TRAPPC3-208ENST00000616074 GTF2IRD2Q86UP8 949 aa18.52■□□□□ 0.56
TRAPPC3-208ENST00000616074 PRIMA1Q86XR5 153 aa18.52■□□□□ 0.56
TRAPPC3-208ENST00000616074 PIGUQ9H490 435 aa18.52■□□□□ 0.56
TRAPPC3-208ENST00000616074 TRAF6Q9Y4K3 522 aa18.52■□□□□ 0.56
TRAPPC3-208ENST00000616074 SNX8Q9Y5X2 465 aa18.52■□□□□ 0.56
TRAPPC3-208ENST00000616074 NUP214P35658 2090 aaPredicted RBP18.51■□□□□ 0.55
TRAPPC3-208ENST00000616074 CSPG4Q6UVK1 2322 aa18.51■□□□□ 0.55
TRAPPC3-208ENST00000616074 HS3ST1O14792 307 aa18.51■□□□□ 0.55
TRAPPC3-208ENST00000616074 NTN1O95631 604 aa18.51■□□□□ 0.55
TRAPPC3-208ENST00000616074 LAMP1P11279 417 aa18.51■□□□□ 0.55
TRAPPC3-208ENST00000616074 ALDH3A1P30838 453 aa18.51■□□□□ 0.55
TRAPPC3-208ENST00000616074 ARL13AQ5H913 290 aaPredicted RBP18.51■□□□□ 0.55
TRAPPC3-208ENST00000616074 ALKBH2Q6NS38 261 aa18.51■□□□□ 0.55
TRAPPC3-208ENST00000616074 CDC73Q6P1J9 531 aa18.51■□□□□ 0.55
TRAPPC3-208ENST00000616074 NUFIP2Q7Z417 695 aaKnown RBP18.51■□□□□ 0.55
TRAPPC3-208ENST00000616074 MTERF4Q7Z6M4 381 aaKnown RBP18.51■□□□□ 0.55
TRAPPC3-208ENST00000616074 ZNF611Q8N823 705 aa18.51■□□□□ 0.55
TRAPPC3-208ENST00000616074 EIF1ADQ8N9N8 165 aaKnown RBP18.51■□□□□ 0.55
TRAPPC3-208ENST00000616074 FBXO27Q8NI29 283 aa18.51■□□□□ 0.55
TRAPPC3-208ENST00000616074 CPNE4Q96A23 557 aaPredicted RBP18.51■□□□□ 0.55
TRAPPC3-208ENST00000616074 S100PBPQ96BU1 408 aa18.51■□□□□ 0.55
TRAPPC3-208ENST00000616074 MECRQ9BV79 373 aa18.51■□□□□ 0.55
TRAPPC3-208ENST00000616074 CXorf56Q9H5V9 222 aa18.51■□□□□ 0.55
TRAPPC3-208ENST00000616074 ZNF701Q9NV72 531 aaPredicted RBP18.51■□□□□ 0.55
TRAPPC3-208ENST00000616074 ICAM5Q9UMF0 924 aa18.51■□□□□ 0.55
TRAPPC3-208ENST00000616074 HIVEP2P31629 2446 aa18.51■□□□□ 0.55
TRAPPC3-208ENST00000616074 ANK3Q12955 4377 aaKnown RBP18.51■□□□□ 0.55
TRAPPC3-208ENST00000616074 TMEM114B3SHH9 223 aa18.5■□□□□ 0.55
TRAPPC3-208ENST00000616074 NPHS1O60500 1241 aa18.5■□□□□ 0.55
TRAPPC3-208ENST00000616074 GCM2O75603 506 aaPredicted RBP18.5■□□□□ 0.55
TRAPPC3-208ENST00000616074 NUDT14O95848 222 aa18.5■□□□□ 0.55
TRAPPC3-208ENST00000616074 PABPC4LP0CB38 370 aaKnown RBP18.5■□□□□ 0.55
TRAPPC3-208ENST00000616074 DDX5P17844 614 aaKnown RBP18.5■□□□□ 0.55
TRAPPC3-208ENST00000616074 ATP6V1C1P21283 382 aa18.5■□□□□ 0.55
TRAPPC3-208ENST00000616074 P2RX1P51575 399 aa18.5■□□□□ 0.55
TRAPPC3-208ENST00000616074 TP53BP2Q13625 1128 aa18.5■□□□□ 0.55
TRAPPC3-208ENST00000616074 PTGR1Q14914 329 aa18.5■□□□□ 0.55
TRAPPC3-208ENST00000616074 TSC22D1Q15714 1073 aa18.5■□□□□ 0.55
TRAPPC3-208ENST00000616074 TOMM34Q15785 309 aaPredicted RBP18.5■□□□□ 0.55
TRAPPC3-208ENST00000616074 KLHL26Q53HC5 615 aa18.5■□□□□ 0.55
TRAPPC3-208ENST00000616074 XKR7Q5GH72 579 aa18.5■□□□□ 0.55
TRAPPC3-208ENST00000616074 TMEM201Q5SNT2 666 aa18.5■□□□□ 0.55
TRAPPC3-208ENST00000616074 DCST2Q5T1A1 773 aa18.5■□□□□ 0.55
TRAPPC3-208ENST00000616074 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.5■□□□□ 0.55
TRAPPC3-208ENST00000616074 TFAP2EQ6VUC0 442 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms