RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 GTF2E2P29084 291 aaKnown RBP2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 OXTRP30559 389 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 HOXA9P31269 272 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 PPP1R2P41236 205 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 CDKN2CP42773 168 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 SLC1A4P43007 532 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 CBX5P45973 191 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 GYG1P46976 350 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 UQCRFS1P47985 274 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 CDC34P49427 236 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 ACLYP53396 1101 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 LIMK2P53671 638 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 MAGOHP61326 146 aaKnown RBP2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 POLR2GP62487 172 aaKnown RBP eCLIP2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 PPIAP62937 165 aaKnown RBP2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 HERVK_113P63132 956 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 ERVK-8P63133 956 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 FKBP1BP68106 108 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 REEP5Q00765 189 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 PMS2P3Q13401 168 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 EXOSC2Q13868 293 aaKnown RBP2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 VEZF1Q14119 521 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 CYTH1Q15438 398 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 EXT1Q16394 746 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 MICBQ29980 383 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 ALKBH6Q3KRA9 238 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 ZFP69Q49AA0 526 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 GPR33Q49SQ1 333 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 CT45A2Q5DJT8 189 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 SLC25A53Q5H9E4 307 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 CLVS2Q5SYC1 327 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 C6orf183Q5T699 404 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 LIPKQ5VXJ0 399 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 WSCD1Q658N2 575 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 ZNF470Q6ECI4 717 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 FAM166AQ6J272 317 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 PYHIN1Q6K0P9 492 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 C11orf63Q6NUN7 778 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 FAM71F2Q6NXP2 309 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 PPP1R2P3Q6NXS1 205 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 ZNF790Q6PG37 636 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 TMIGD1Q6UXZ0 262 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 ZNF497Q6ZNH5 498 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 GCNT7Q6ZNI0 430 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 SH2D5Q6ZV89 423 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 NCCRP1Q6ZVX7 275 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 CYP4V2Q6ZWL3 525 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 SLC35D2Q76EJ3 337 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 ZNF534Q76KX8 674 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 H2BFWTQ7Z2G1 175 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 DPY19L4Q7Z388 723 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 P4HA3Q7Z4N8 544 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 ARHGAP22Q7Z5H3 698 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 LHFPL4Q7Z7J7 247 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 ISCA2Q86U28 154 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 SLC26A11Q86WA9 606 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 GPBP1Q86WP2 473 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 PTOV1Q86YD1 416 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 APCDD1Q8J025 514 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 MLKLQ8NB16 471 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 RNF149Q8NC42 400 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 NOA1Q8NC60 698 aaKnown RBP2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 NECAP1Q8NC96 275 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 CCDC197Q8NCU1 140 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 STXBP6Q8NFX7 210 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 OR7G2Q8NG99 324 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 OR5AU1Q8NGC0 362 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 OR8J2Q8NGG1 315 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 OR4D6Q8NGJ1 314 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 OR51L1Q8NGJ5 315 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 OR4A15Q8NGL6 344 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 OR1L4Q8NGR5 311 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 TCP11Q8WWU5 503 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 ARNTL2Q8WYA1 636 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 ST8SIA1Q92185 356 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 PIGCQ92535 297 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 LHX4Q969G2 390 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 MYLPFQ96A32 169 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 SLC25A36Q96CQ1 311 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 ECHDC3Q96DC8 303 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 SENP5Q96HI0 755 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 B3GALT6Q96L58 329 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 TGM7Q96PF1 710 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 GFI1Q99684 422 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 PRMT1Q99873 361 aaKnown RBP2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 CCDC3Q9BQI4 270 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 RTP3Q9BQQ7 232 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 C7orf50Q9BRJ6 194 aaKnown RBP2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 PELOQ9BRX2 385 aaKnown RBP2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 FUNDC2Q9BWH2 189 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 RBM24Q9BX46 236 aaKnown RBP2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 ERVK-6Q9BXR3 956 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 PRRG3Q9BZD7 231 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 UPF3BQ9BZI7 483 aaKnown RBP2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 DERL2Q9GZP9 239 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 MIS12Q9H081 205 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 DPEP3Q9H4B8 488 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 DHX33Q9H6R0 707 aaKnown RBP2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 RNF121Q9H920 327 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 CALHM2Q9HA72 323 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms