RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 DEPPQ9NTK1 212 aa13.43□□□□□ -0.26
CD48-203ENST00000613788 RLIMQ9NVW2 624 aa13.43□□□□□ -0.26
CD48-203ENST00000613788 BOKQ9UMX3 212 aaPredicted RBP13.43□□□□□ -0.26
CD48-203ENST00000613788 B3GNT3Q9Y2A9 372 aa13.43□□□□□ -0.26
CD48-203ENST00000613788 CARD8Q9Y2G2 431 aa13.43□□□□□ -0.26
CD48-203ENST00000613788 MGAQ8IWI9 3026 aa13.43□□□□□ -0.26
CD48-203ENST00000613788 ACACBO00763 2458 aa13.42□□□□□ -0.26
CD48-203ENST00000613788 IGLV3-32A0A0A0MS00 114 aa13.42□□□□□ -0.26
CD48-203ENST00000613788 ADAM10O14672 748 aa13.42□□□□□ -0.26
CD48-203ENST00000613788 TRIM3O75382 744 aaPredicted RBP13.42□□□□□ -0.26
CD48-203ENST00000613788 CYP7B1O75881 506 aa13.42□□□□□ -0.26
CD48-203ENST00000613788 UBTFL6P0CB48 400 aaPredicted RBP13.42□□□□□ -0.26
CD48-203ENST00000613788 P2RX1P51575 399 aa13.42□□□□□ -0.26
CD48-203ENST00000613788 GPR85P60893 370 aa13.42□□□□□ -0.26
CD48-203ENST00000613788 TIGD3Q6B0B8 471 aa13.42□□□□□ -0.26
CD48-203ENST00000613788 ZNF550Q7Z398 422 aa13.42□□□□□ -0.26
CD48-203ENST00000613788 PLCZ1Q86YW0 608 aa13.42□□□□□ -0.26
CD48-203ENST00000613788 FAM71CQ8NEG0 241 aa13.42□□□□□ -0.26
CD48-203ENST00000613788 TOR1AIP2Q8NFQ8 470 aa13.42□□□□□ -0.26
CD48-203ENST00000613788 GPR32P1Q8NGA4 272 aa13.42□□□□□ -0.26
CD48-203ENST00000613788 B4GALNT2Q8NHY0 566 aa13.42□□□□□ -0.26
CD48-203ENST00000613788 CNOT9Q92600 299 aaKnown RBP13.42□□□□□ -0.26
CD48-203ENST00000613788 DTNBP1Q96EV8 351 aa13.42□□□□□ -0.26
CD48-203ENST00000613788 PYURFQ96I23 114 aa13.42□□□□□ -0.26
CD48-203ENST00000613788 JSRP1Q96MG2 331 aaPredicted RBP13.42□□□□□ -0.26
CD48-203ENST00000613788 UGT2B28Q9BY64 529 aa13.42□□□□□ -0.26
CD48-203ENST00000613788 PTGES2Q9H7Z7 377 aa13.42□□□□□ -0.26
CD48-203ENST00000613788 PRDM4Q9UKN5 801 aa13.42□□□□□ -0.26
CD48-203ENST00000613788 SLC9A8Q9Y2E8 581 aa13.42□□□□□ -0.26
CD48-203ENST00000613788 SH3GLB1Q9Y371 365 aa13.42□□□□□ -0.26
CD48-203ENST00000613788 CHST2Q9Y4C5 530 aa13.42□□□□□ -0.26
CD48-203ENST00000613788 GNB5O14775 395 aa13.41□□□□□ -0.26
CD48-203ENST00000613788 SNPHO15079 494 aa13.41□□□□□ -0.26
CD48-203ENST00000613788 CBR3O75828 277 aa13.41□□□□□ -0.26
CD48-203ENST00000613788 PRKD3O94806 890 aa13.41□□□□□ -0.26
CD48-203ENST00000613788 UMPSP11172 480 aa13.41□□□□□ -0.26
CD48-203ENST00000613788 UQCRBP14927 111 aa13.41□□□□□ -0.26
CD48-203ENST00000613788 SLC6A8P48029 635 aa13.41□□□□□ -0.26
CD48-203ENST00000613788 ZNF117Q03924 483 aa13.41□□□□□ -0.26
CD48-203ENST00000613788 SKP2Q13309 424 aa13.41□□□□□ -0.26
CD48-203ENST00000613788 GLIPR1L2Q4G1C9 344 aa13.41□□□□□ -0.26
CD48-203ENST00000613788 IFI44LQ53G44 452 aa13.41□□□□□ -0.26
CD48-203ENST00000613788 OR5M10Q6IEU7 315 aa13.41□□□□□ -0.26
CD48-203ENST00000613788 SPATA24Q86W54 205 aa13.41□□□□□ -0.26
CD48-203ENST00000613788 C10orf67Q8IYJ2 551 aa13.41□□□□□ -0.26
CD48-203ENST00000613788 TMCO5AQ8N6Q1 288 aa13.41□□□□□ -0.26
CD48-203ENST00000613788 EXD3Q8N9H8 876 aa13.41□□□□□ -0.26
CD48-203ENST00000613788 WDSUB1Q8N9V3 476 aa13.41□□□□□ -0.26
CD48-203ENST00000613788 OR4K17Q8NGC6 315 aa13.41□□□□□ -0.26
CD48-203ENST00000613788 OR10Q1Q8NGQ4 319 aa13.41□□□□□ -0.26
CD48-203ENST00000613788 WBP1Q96G27 269 aa13.41□□□□□ -0.26
CD48-203ENST00000613788 SH3YL1Q96HL8 342 aaPredicted RBP13.41□□□□□ -0.26
CD48-203ENST00000613788 HSH2DQ96JZ2 352 aa13.41□□□□□ -0.26
CD48-203ENST00000613788 RSPO3Q9BXY4 272 aaPredicted RBP13.41□□□□□ -0.26
CD48-203ENST00000613788 MFRPQ9BY79 579 aa13.41□□□□□ -0.26
CD48-203ENST00000613788 SLC25A18Q9H1K4 315 aa13.41□□□□□ -0.26
CD48-203ENST00000613788 ZFP64Q9NPA5 681 aa13.41□□□□□ -0.26
CD48-203ENST00000613788 DNAJB12Q9NXW2 375 aaKnown RBP13.41□□□□□ -0.26
CD48-203ENST00000613788 TUBA8Q9NY65 449 aaPredicted RBP13.41□□□□□ -0.26
CD48-203ENST00000613788 EXPH5Q8NEV8 1989 aa13.41□□□□□ -0.26
CD48-203ENST00000613788 A0A0G2JMM0 328 aa13.4□□□□□ -0.26
CD48-203ENST00000613788 A0A1W2PPB8 328 aa13.4□□□□□ -0.26
CD48-203ENST00000613788 A0A1W2PRS3 328 aa13.4□□□□□ -0.26
CD48-203ENST00000613788 TCRBV5S2A0A599 114 aa13.4□□□□□ -0.26
CD48-203ENST00000613788 KIR3DP1A8MWS1 328 aa13.4□□□□□ -0.26
CD48-203ENST00000613788 TMEM229AB2RXF0 380 aa13.4□□□□□ -0.26
CD48-203ENST00000613788 ANKRD65E5RJM6 399 aa13.4□□□□□ -0.26
CD48-203ENST00000613788 EPPINO95925 133 aa13.4□□□□□ -0.26
CD48-203ENST00000613788 HOXB6P17509 224 aaKnown RBP13.4□□□□□ -0.26
CD48-203ENST00000613788 MEOX1P50221 254 aa13.4□□□□□ -0.26
CD48-203ENST00000613788 SUMO3P55854 103 aaPredicted RBP13.4□□□□□ -0.26
CD48-203ENST00000613788 RGS8P57771 180 aaPredicted RBP13.4□□□□□ -0.26
CD48-203ENST00000613788 KCNC4Q03721 635 aa13.4□□□□□ -0.26
CD48-203ENST00000613788 CBFBQ13951 182 aa13.4□□□□□ -0.26
CD48-203ENST00000613788 RPUSD3Q6P087 351 aaKnown RBP13.4□□□□□ -0.26
CD48-203ENST00000613788 CBLN3Q6UW01 205 aa13.4□□□□□ -0.26
CD48-203ENST00000613788 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.4□□□□□ -0.26
CD48-203ENST00000613788 VTCN1Q7Z7D3 282 aa13.4□□□□□ -0.26
CD48-203ENST00000613788 OR5W2Q8NH69 310 aa13.4□□□□□ -0.26
CD48-203ENST00000613788 GEMIN6Q8WXD5 167 aaKnown RBP13.4□□□□□ -0.26
CD48-203ENST00000613788 ARHGDIGQ99819 225 aa13.4□□□□□ -0.26
CD48-203ENST00000613788 DSN1Q9H410 356 aa13.4□□□□□ -0.26
CD48-203ENST00000613788 MED11Q9P086 117 aa13.4□□□□□ -0.26
CD48-203ENST00000613788 B4GALT7Q9UBV7 327 aa13.4□□□□□ -0.26
CD48-203ENST00000613788 ICAM5Q9UMF0 924 aa13.4□□□□□ -0.26
CD48-203ENST00000613788 TPRP12270 2363 aaKnown RBP13.4□□□□□ -0.26
CD48-203ENST00000613788 ZZEF1O43149 2961 aa13.4□□□□□ -0.26
CD48-203ENST00000613788 BCAS1O75363 584 aaPredicted RBP13.39□□□□□ -0.27
CD48-203ENST00000613788 RASAL1O95294 804 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 NUDT14O95848 222 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 LINGO3P0C6S8 592 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 PGCP20142 388 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 CCR4P51679 360 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 PLGLB1Q02325 96 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 FOXO1Q12778 655 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 INPP5JQ15735 1006 aaPredicted RBP13.39□□□□□ -0.27
CD48-203ENST00000613788 NRF1Q16656 503 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 NDUFAF6Q330K2 333 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 FAM98BQ52LJ0 330 aaKnown RBP13.39□□□□□ -0.27
CD48-203ENST00000613788 SLC6A19Q695T7 634 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms