RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 SPRYD4Q8WW59 207 aaPredicted RBP8.3□□□□□ -1.08
TTC28-208ENST00000612946 ZBTB45Q96K62 511 aaPredicted RBP8.3□□□□□ -1.08
TTC28-208ENST00000612946 SMOC2Q9H3U7 446 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 KCNG2Q9UJ96 466 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 CACNA1DQ01668 2161 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 PIRTP0C851 137 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 ZNF43P17038 809 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 DLK1P80370 383 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 HMGCS1Q01581 520 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 PIGFQ07326 219 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 FLYWCH1Q4VC44 716 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 IL17RDQ8NFM7 739 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 CMBLQ96DG6 245 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 GNPNAT1Q96EK6 184 aaPredicted RBP8.29□□□□□ -1.08
TTC28-208ENST00000612946 VSX1Q9NZR4 365 aaPredicted RBP8.29□□□□□ -1.08
TTC28-208ENST00000612946 RASD1Q9Y272 281 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 TMEM150CB9EJG8 249 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 SGK494L7N484 410 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 MSTNO14793 375 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 HTR3AP46098 478 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 BDH1Q02338 343 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 SLC35F2Q8IXU6 374 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 MYADMQ96S97 322 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 ABHD16BQ9H3Z7 469 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 DIMT1Q9UNQ2 313 aaKnown RBP8.29□□□□□ -1.08
TTC28-208ENST00000612946 ECM29Q5VYK3 1845 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 ANKUB1A6NFN9 424 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 SEC14L6B5MCN3 397 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 TISP43B9A030 160 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 GABARAPH6UMI1 98 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 OPN1SWP03999 348 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 C1GALT1C1LP0DN25 315 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 PSMD8P48556 350 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 HNRNPA3P51991 378 aaKnown RBP8.29□□□□□ -1.08
TTC28-208ENST00000612946 AKR1C2P52895 323 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 GLO1Q04760 184 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 ATPAF1Q5TC12 328 aaPredicted RBP8.29□□□□□ -1.08
TTC28-208ENST00000612946 HSD17B13Q7Z5P4 300 aaPredicted RBP8.29□□□□□ -1.08
TTC28-208ENST00000612946 GRHL3Q8TE85 626 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 CDKN2AIPNLQ96HQ2 116 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 NOL4LQ96MY1 436 aaPredicted RBP8.29□□□□□ -1.08
TTC28-208ENST00000612946 SLC30A3Q99726 388 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 MAN2C1Q9NTJ4 1040 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 PAN2Q504Q3 1202 aaKnown RBP8.29□□□□□ -1.08
TTC28-208ENST00000612946 GPR135Q8IZ08 494 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 ZNF300Q96RE9 604 aaPredicted RBP8.29□□□□□ -1.08
TTC28-208ENST00000612946 CDCA4Q9BXL8 241 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 ATG10Q9H0Y0 220 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 G3V2L1 256 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 GLUD1P00367 558 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 PFKMP08237 780 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 HOXB1P14653 301 aaPredicted RBP8.29□□□□□ -1.08
TTC28-208ENST00000612946 CASP7P55210 303 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 ZNF239Q16600 458 aaKnown RBP8.29□□□□□ -1.08
TTC28-208ENST00000612946 FBXO16Q8IX29 292 aaPredicted RBP8.29□□□□□ -1.08
TTC28-208ENST00000612946 FAM185AQ8N0U4 392 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 OR14L1PQ8NHC6 308 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 TBC1D20Q96BZ9 403 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 C11orf49Q9H6J7 331 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 FBXW2Q9UKT8 454 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 SLC27A5Q9Y2P5 690 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 TRABD2BA6NFA1 517 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 AGPAT2O15120 278 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 EMC8O43402 210 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 CSF2RAP15509 400 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 ZNF852Q6ZMS4 543 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 VRK3Q8IV63 474 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 OR1S1Q8NH92 325 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 SH3BGRL2Q9UJC5 107 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 VIPP01282 170 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 LGALS2P05162 132 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 LPLP06858 475 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 AMD1P17707 334 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 SOX18P35713 384 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 ENDOGQ14249 297 aaKnown RBP8.29□□□□□ -1.08
TTC28-208ENST00000612946 PPTC7Q8NI37 304 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 VAMP8Q9BV40 100 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 ALOXE3Q9BYJ1 711 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 CRTAC1Q9NQ79 661 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 KCNIP1Q9NZI2 227 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 RNF181Q9P0P0 153 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 ACAD8Q9UKU7 415 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 SARDHQ9UL12 918 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 LSM5Q9Y4Y9 91 aaKnown RBP8.29□□□□□ -1.08
TTC28-208ENST00000612946 LOC105369274A0A096LPK9 316 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 TP53I11O14683 189 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 WEE1P30291 646 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 MELKQ14680 651 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 OR4N4Q8N0Y3 316 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 BPIFA2Q96DR5 249 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 ZNF281Q9Y2X9 895 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 TRAV18A0A075B6X5 111 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 LOC102723532A0A0G2JNH3 316 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 CA12O43570 354 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 APOA2P02652 100 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 AK4P27144 223 aaPredicted RBP8.29□□□□□ -1.08
TTC28-208ENST00000612946 HIST1H3AP68431 136 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 SIRPB2Q5JXA9 342 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 FAM182AQ5T1J6 154 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 AMZ2Q86W34 360 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms