RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 LAPTM4AQ15012 233 aa16.07■□□□□ 0.16
SREK1-216ENST00000612404 BICRALQ6AI39 1079 aa16.07■□□□□ 0.16
SREK1-216ENST00000612404 PLEKHM3Q6ZWE6 761 aa16.07■□□□□ 0.16
SREK1-216ENST00000612404 ZNF550Q7Z398 422 aa16.07■□□□□ 0.16
SREK1-216ENST00000612404 TSPYL5Q86VY4 417 aaPredicted RBP16.07■□□□□ 0.16
SREK1-216ENST00000612404 GALNT16Q8N428 558 aa16.07■□□□□ 0.16
SREK1-216ENST00000612404 PRRC1Q96M27 445 aa16.07■□□□□ 0.16
SREK1-216ENST00000612404 CCNL2Q96S94 520 aaPredicted RBP16.07■□□□□ 0.16
SREK1-216ENST00000612404 KLHL4Q9C0H6 718 aa16.07■□□□□ 0.16
SREK1-216ENST00000612404 NMNAT1Q9HAN9 279 aaPredicted RBP16.07■□□□□ 0.16
SREK1-216ENST00000612404 ANKRD10Q9NXR5 420 aa16.07■□□□□ 0.16
SREK1-216ENST00000612404 STMN3Q9NZ72 180 aa16.07■□□□□ 0.16
SREK1-216ENST00000612404 A4GNTQ9UNA3 340 aa16.07■□□□□ 0.16
SREK1-216ENST00000612404 CNTRLQ7Z7A1 2325 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 A6NL46 340 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 C17orf51A8MQB3 221 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 G3V2T6 193 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 OIP5O43482 229 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 HCRTR2O43614 444 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 DNAJA1P31689 397 aaKnown RBP16.06■□□□□ 0.16
SREK1-216ENST00000612404 GCKP35557 465 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 CDC20Q12834 499 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 OTUD3Q5T2D3 398 aaPredicted RBP16.06■□□□□ 0.16
SREK1-216ENST00000612404 ABHD17BQ5VST6 288 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 ZBTB49Q6ZSB9 765 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 TMEM179BQ7Z7N9 219 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 ZNF605Q86T29 641 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 ZDHHC13Q8IUH4 622 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 EPHX4Q8IUS5 362 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 BEST3Q8N1M1 668 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 ADAMTS16Q8TE57 1224 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 PHF10Q8WUB8 498 aaKnown RBP16.06■□□□□ 0.16
SREK1-216ENST00000612404 SDCCAG3Q96C92 435 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 DPH1Q9BZG8 443 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 ING2Q9H160 280 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 VCX3BQ9H321 246 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 EVA1AQ9H8M9 152 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 GALNT9Q9HCQ5 603 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 TESQ9UGI8 421 aaKnown RBP16.06■□□□□ 0.16
SREK1-216ENST00000612404 POLHQ9Y253 713 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 MAGED1Q9Y5V3 778 aaPredicted RBP16.06■□□□□ 0.16
SREK1-216ENST00000612404 LYVE1Q9Y5Y7 322 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 C2orf72A6NCS6 295 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 DPM1O60762 260 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 ADAM11O75078 769 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 H1F0P07305 194 aaKnown RBP16.06■□□□□ 0.16
SREK1-216ENST00000612404 FUT4P22083 530 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 IFNA8P32881 189 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 ARHGDIAP52565 204 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 SKP2Q13309 424 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 FGD3Q5JSP0 725 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 COLEC12Q5KU26 742 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 ZNF468Q5VIY5 522 aaPredicted RBP16.06■□□□□ 0.16
SREK1-216ENST00000612404 CBLN3Q6UW01 205 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 STK32CQ86UX6 486 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 DND1Q8IYX4 353 aaKnown RBP16.06■□□□□ 0.16
SREK1-216ENST00000612404 HS3ST5Q8IZT8 346 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 CBR4Q8N4T8 237 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 OR5K1Q8NHB7 308 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 SNIP1Q8TAD8 396 aaKnown RBP16.06■□□□□ 0.16
SREK1-216ENST00000612404 EPYCQ99645 322 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 C9orf16Q9BUW7 83 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 COQ10BQ9H8M1 238 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 ACER3Q9NUN7 267 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 ACAD8Q9UKU7 415 aa16.06■□□□□ 0.16
SREK1-216ENST00000612404 ENDOUP21128 410 aaKnown RBP16.05■□□□□ 0.16
SREK1-216ENST00000612404 HTR2AP28223 471 aa16.05■□□□□ 0.16
SREK1-216ENST00000612404 ZNF117Q03924 483 aa16.05■□□□□ 0.16
SREK1-216ENST00000612404 ZNF440Q8IYI8 595 aa16.05■□□□□ 0.16
SREK1-216ENST00000612404 SVOPLQ8N434 492 aa16.05■□□□□ 0.16
SREK1-216ENST00000612404 GALNT4Q8N4A0 578 aa16.05■□□□□ 0.16
SREK1-216ENST00000612404 CATSPER1Q8NEC5 780 aa16.05■□□□□ 0.16
SREK1-216ENST00000612404 FAM71CQ8NEG0 241 aa16.05■□□□□ 0.16
SREK1-216ENST00000612404 DUSP19Q8WTR2 217 aa16.05■□□□□ 0.16
SREK1-216ENST00000612404 SLC35B4Q969S0 331 aa16.05■□□□□ 0.16
SREK1-216ENST00000612404 ZNF559Q9BR84 538 aa16.05■□□□□ 0.16
SREK1-216ENST00000612404 CHCHD2Q9Y6H1 151 aaPredicted RBP16.05■□□□□ 0.16
SREK1-216ENST00000612404 HEATR5AQ86XA9 2040 aa16.04■□□□□ 0.16
SREK1-216ENST00000612404 SOCS2O14508 198 aa16.04■□□□□ 0.16
SREK1-216ENST00000612404 F10P00742 488 aa16.04■□□□□ 0.16
SREK1-216ENST00000612404 LINGO3P0C6S8 592 aa16.04■□□□□ 0.16
SREK1-216ENST00000612404 FPR1P21462 350 aa16.04■□□□□ 0.16
SREK1-216ENST00000612404 ACAA2P42765 397 aaKnown RBP16.04■□□□□ 0.16
SREK1-216ENST00000612404 RPP38P78345 283 aaKnown RBP16.04■□□□□ 0.16
SREK1-216ENST00000612404 OC90Q02509 493 aaPredicted RBP16.04■□□□□ 0.16
SREK1-216ENST00000612404 OR1Q1Q15612 314 aa16.04■□□□□ 0.16
SREK1-216ENST00000612404 EXOC3L2Q2M3D2 409 aa16.04■□□□□ 0.16
SREK1-216ENST00000612404 DEFB109BQ30KR1 87 aa16.04■□□□□ 0.16
SREK1-216ENST00000612404 CRTC2Q53ET0 693 aaPredicted RBP16.04■□□□□ 0.16
SREK1-216ENST00000612404 OR5M10Q6IEU7 315 aa16.04■□□□□ 0.16
SREK1-216ENST00000612404 SHQ1Q6PI26 577 aaKnown RBP16.04■□□□□ 0.16
SREK1-216ENST00000612404 CYP4Z2PQ8N1L4 340 aa16.04■□□□□ 0.16
SREK1-216ENST00000612404 CADM2Q8N3J6 435 aa16.04■□□□□ 0.16
SREK1-216ENST00000612404 RNF217Q8TC41 542 aa16.04■□□□□ 0.16
SREK1-216ENST00000612404 BARD1Q99728 777 aaKnown RBP16.04■□□□□ 0.16
SREK1-216ENST00000612404 CCDC86Q9H6F5 360 aaKnown RBP16.04■□□□□ 0.16
SREK1-216ENST00000612404 EFSO43281 561 aa16.04■□□□□ 0.16
SREK1-216ENST00000612404 FMO6PO60774 539 aa16.04■□□□□ 0.16
SREK1-216ENST00000612404 PRKACGP22612 351 aa16.04■□□□□ 0.16
SREK1-216ENST00000612404 ITPKBP27987 946 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms