RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 HOXB13Q92826 284 aaPredicted RBP13.36□□□□□ -0.27
PCDHB16-201ENST00000609684 RPL3LQ92901 407 aaKnown RBP13.36□□□□□ -0.27
PCDHB16-201ENST00000609684 SLC5A7Q9GZV3 580 aa13.36□□□□□ -0.27
PCDHB16-201ENST00000609684 PDFQ9HBH1 243 aa13.36□□□□□ -0.27
PCDHB16-201ENST00000609684 NUMBLQ9Y6R0 609 aa13.36□□□□□ -0.27
PCDHB16-201ENST00000609684 NARSO43776 548 aaKnown RBP13.36□□□□□ -0.27
PCDHB16-201ENST00000609684 SFTPBP07988 381 aa13.36□□□□□ -0.27
PCDHB16-201ENST00000609684 NPPBP16860 134 aa13.36□□□□□ -0.27
PCDHB16-201ENST00000609684 CR2P20023 1033 aa13.36□□□□□ -0.27
PCDHB16-201ENST00000609684 EMP2P54851 167 aa13.36□□□□□ -0.27
PCDHB16-201ENST00000609684 RPS15P62841 145 aaKnown RBP13.36□□□□□ -0.27
PCDHB16-201ENST00000609684 MRPL58Q14197 206 aaKnown RBP13.36□□□□□ -0.27
PCDHB16-201ENST00000609684 RNASE10Q5GAN6 216 aaKnown RBP13.36□□□□□ -0.27
PCDHB16-201ENST00000609684 SPNS2Q8IVW8 549 aa13.36□□□□□ -0.27
PCDHB16-201ENST00000609684 OR4F15Q8NGB8 312 aa13.36□□□□□ -0.27
PCDHB16-201ENST00000609684 SYT4Q9H2B2 425 aa13.36□□□□□ -0.27
PCDHB16-201ENST00000609684 TM7SF3Q9NS93 570 aa13.36□□□□□ -0.27
PCDHB16-201ENST00000609684 CBLCQ9ULV8 474 aa13.36□□□□□ -0.27
PCDHB16-201ENST00000609684 LINC01553A4QN01 128 aa13.36□□□□□ -0.27
PCDHB16-201ENST00000609684 TMEM202A6NGA9 273 aa13.36□□□□□ -0.27
PCDHB16-201ENST00000609684 A8MVJ9 347 aa13.36□□□□□ -0.27
PCDHB16-201ENST00000609684 UGT2B7P16662 529 aa13.36□□□□□ -0.27
PCDHB16-201ENST00000609684 ERP29P30040 261 aaKnown RBP13.36□□□□□ -0.27
PCDHB16-201ENST00000609684 PITPNBP48739 271 aa13.36□□□□□ -0.27
PCDHB16-201ENST00000609684 MRPS21P82921 87 aaKnown RBP13.36□□□□□ -0.27
PCDHB16-201ENST00000609684 NHSL2Q5HYW2 709 aa13.36□□□□□ -0.27
PCDHB16-201ENST00000609684 CCSAPQ6IQ19 270 aaPredicted RBP13.36□□□□□ -0.27
PCDHB16-201ENST00000609684 EPHX3Q9H6B9 360 aa13.36□□□□□ -0.27
PCDHB16-201ENST00000609684 MLXQ9UH92 298 aa13.36□□□□□ -0.27
PCDHB16-201ENST00000609684 BCORQ6W2J9 1755 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 PRKRAO75569 313 aaKnown RBP13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 CD38P28907 300 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 CD6P30203 668 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 IRS1P35568 1242 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 REEP5Q00765 189 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 MRPL2Q5T653 305 aaKnown RBP13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 GPR137CQ8N3F9 429 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 DNAJC22Q8N4W6 341 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 COQ8AQ8NI60 647 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 SLC25A44Q96H78 314 aaPredicted RBP13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 SYNPO2LQ9H987 977 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 SAGE1Q9NXZ1 904 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 TVP23AA6NH52 213 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 HMGB3O15347 200 aaKnown RBP13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 IGLV3-27P01718 113 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 ZDHHC11BP0C7U3 371 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 TNFRSF4P43489 277 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 TNFRSF17Q02223 184 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 MBTPS1Q14703 1052 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 ACSM3Q53FZ2 586 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 HENMT1Q5T8I9 393 aaKnown RBP13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 AFMIDQ63HM1 303 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 C18orf63Q68DL7 685 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 DESI1Q6ICB0 168 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 TMEM205Q6UW68 189 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 MUL1Q969V5 352 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 HDAC8Q9BY41 377 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 COPZ2Q9P299 210 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 KCNIP3Q9Y2W7 256 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 ARAP2Q8WZ64 1704 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 PCP4L1A6NKN8 68 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 NOTOA8MTQ0 251 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 NUDT1P36639 197 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 EIF2B1Q14232 305 aaKnown RBP13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 SLC22A10Q63ZE4 541 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 HMBOX1Q6NT76 420 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 C4orf36Q96KX1 117 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 SLC25A18Q9H1K4 315 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 MMP28Q9H239 520 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 THAP10Q9P2Z0 257 aaPredicted RBP13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 A0A1B0GVG6 124 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 KRBA1A5PL33 1030 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 OR2T1O43869 369 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 CRABP1P29762 137 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 TSPAN31Q12999 210 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 BCL7AQ4VC05 210 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 OR2G6Q5TZ20 316 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 ZSCAN4Q8NAM6 433 aaPredicted RBP13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 MYEOVQ96EZ4 313 aa13.35□□□□□ -0.27
PCDHB16-201ENST00000609684 SYT7O43581 403 aa13.34□□□□□ -0.27
PCDHB16-201ENST00000609684 ACP2P11117 423 aa13.34□□□□□ -0.27
PCDHB16-201ENST00000609684 OR6Q1Q8NGQ2 317 aa13.34□□□□□ -0.27
PCDHB16-201ENST00000609684 GPR148Q8TDV2 347 aa13.34□□□□□ -0.27
PCDHB16-201ENST00000609684 NXPE3Q969Y0 559 aa13.34□□□□□ -0.27
PCDHB16-201ENST00000609684 TBC1D20Q96BZ9 403 aa13.34□□□□□ -0.27
PCDHB16-201ENST00000609684 LMF2Q9BU23 707 aaKnown RBP13.34□□□□□ -0.27
PCDHB16-201ENST00000609684 ARL6Q9H0F7 186 aa13.34□□□□□ -0.27
PCDHB16-201ENST00000609684 SACM1LQ9NTJ5 587 aa13.34□□□□□ -0.27
PCDHB16-201ENST00000609684 NUP50Q9UKX7 468 aa13.34□□□□□ -0.27
PCDHB16-201ENST00000609684 CDC14CA4D256 554 aa13.34□□□□□ -0.27
PCDHB16-201ENST00000609684 F5H0A9 414 aaPredicted RBP13.34□□□□□ -0.27
PCDHB16-201ENST00000609684 GPX2P18283 190 aa13.34□□□□□ -0.27
PCDHB16-201ENST00000609684 PTH2RP49190 550 aa13.34□□□□□ -0.27
PCDHB16-201ENST00000609684 MLLT11Q13015 90 aaPredicted RBP13.34□□□□□ -0.27
PCDHB16-201ENST00000609684 FAM111BQ6SJ93 734 aa13.34□□□□□ -0.27
PCDHB16-201ENST00000609684 MEPCEQ7L2J0 689 aaKnown RBP13.34□□□□□ -0.27
PCDHB16-201ENST00000609684 BCL7CQ8WUZ0 217 aaPredicted RBP13.34□□□□□ -0.27
PCDHB16-201ENST00000609684 LINC01599Q8WXQ3 324 aa13.34□□□□□ -0.27
PCDHB16-201ENST00000609684 TM4SF18Q96CE8 201 aa13.34□□□□□ -0.27
PCDHB16-201ENST00000609684 BORCS8Q96FH0 119 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms